# STOCKHOLM 1.0
#=GF ID 1.10.10.1420/FF/000003
#=GF DE CDT1-like protein a chloroplastic
#=GF AC 1.10.10.1420/FF/000003
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 82.951
#=GS Q9SJW9/463-567      AC Q9SJW9
#=GS Q9SJW9/463-567      OS Arabidopsis thaliana
#=GS Q9SJW9/463-567      DE CDT1-like protein a, chloroplastic
#=GS Q9SJW9/463-567      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9SJW9/463-567      DR GO; GO:0004693; GO:0005515; GO:0005634; GO:0006260; GO:0009507; GO:0009658; GO:0019901; GO:0048229; GO:0051276; GO:0070182; 
#=GS Q7X7L0/458-587      AC Q7X7L0
#=GS Q7X7L0/458-587      OS Oryza sativa Japonica Group
#=GS Q7X7L0/458-587      DE OSJNBa0001M07.6 protein
#=GS Q7X7L0/458-587      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS F6HZH9/447-577      AC F6HZH9
#=GS F6HZH9/447-577      OS Vitis vinifera
#=GS F6HZH9/447-577      DE Uncharacterized protein
#=GS F6HZH9/447-577      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Vitales; Vitaceae; Viteae; Vitis; Vitis vinifera; 
#=GS K7LZ99/490-619      AC K7LZ99
#=GS K7LZ99/490-619      OS Glycine max
#=GS K7LZ99/490-619      DE Uncharacterized protein
#=GS K7LZ99/490-619      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS R0G1L8/474-578      AC R0G1L8
#=GS R0G1L8/474-578      OS Capsella rubella
#=GS R0G1L8/474-578      DE Uncharacterized protein
#=GS R0G1L8/474-578      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS K7W6L5/437-571      AC K7W6L5
#=GS K7W6L5/437-571      OS Zea mays
#=GS K7W6L5/437-571      DE CDT1-like protein a chloroplastic
#=GS K7W6L5/437-571      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS I1IVK3/445-575      AC I1IVK3
#=GS I1IVK3/445-575      OS Brachypodium distachyon
#=GS I1IVK3/445-575      DE Uncharacterized protein
#=GS I1IVK3/445-575      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; 
#=GS D7LD12/348-452      AC D7LD12
#=GS D7LD12/348-452      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LD12/348-452      DE Uncharacterized protein
#=GS D7LD12/348-452      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A0E0KMY3/461-590  AC A0A0E0KMY3
#=GS A0A0E0KMY3/461-590  OS Oryza punctata
#=GS A0A0E0KMY3/461-590  DE Uncharacterized protein
#=GS A0A0E0KMY3/461-590  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; 
#=GS A0A0D9ZH69/462-591  AC A0A0D9ZH69
#=GS A0A0D9ZH69/462-591  OS Oryza glumipatula
#=GS A0A0D9ZH69/462-591  DE Uncharacterized protein
#=GS A0A0D9ZH69/462-591  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS A0A0E0DAY9/453-582  AC A0A0E0DAY9
#=GS A0A0E0DAY9/453-582  OS Oryza meridionalis
#=GS A0A0E0DAY9/453-582  DE Uncharacterized protein
#=GS A0A0E0DAY9/453-582  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS I1PJ63/458-587      AC I1PJ63
#=GS I1PJ63/458-587      OS Oryza glaberrima
#=GS I1PJ63/458-587      DE Uncharacterized protein
#=GS I1PJ63/458-587      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS A0A0E0P5K0/456-585  AC A0A0E0P5K0
#=GS A0A0E0P5K0/456-585  OS Oryza rufipogon
#=GS A0A0E0P5K0/456-585  DE Uncharacterized protein
#=GS A0A0E0P5K0/456-585  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A0D3FSR5/458-587  AC A0A0D3FSR5
#=GS A0A0D3FSR5/458-587  OS Oryza barthii
#=GS A0A0D3FSR5/458-587  DE Uncharacterized protein
#=GS A0A0D3FSR5/458-587  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; 
#=GS J3LVT2/315-444      AC J3LVT2
#=GS J3LVT2/315-444      OS Oryza brachyantha
#=GS J3LVT2/315-444      DE Uncharacterized protein
#=GS J3LVT2/315-444      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; 
#=GS A0A0E0GB49/455-584  AC A0A0E0GB49
#=GS A0A0E0GB49/455-584  OS Oryza sativa f. spontanea
#=GS A0A0E0GB49/455-584  DE Uncharacterized protein
#=GS A0A0E0GB49/455-584  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; Oryza sativa f. spontanea; 
#=GS A2XQU2/455-584      AC A2XQU2
#=GS A2XQU2/455-584      OS Oryza sativa Indica Group
#=GS A2XQU2/455-584      DE Uncharacterized protein
#=GS A2XQU2/455-584      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS I1L8C7/467-596      AC I1L8C7
#=GS I1L8C7/467-596      OS Glycine max
#=GS I1L8C7/467-596      DE Uncharacterized protein
#=GS I1L8C7/467-596      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS D7LD11/467-571      AC D7LD11
#=GS D7LD11/467-571      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LD11/467-571      DE Uncharacterized protein
#=GS D7LD11/467-571      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GF SQ 19
Q9SJW9/463-567              ---------------------------------SLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQEIVPEWMSEKKSSSGDVLVCINKLASPLTIRSRLEEENKQEMA
Q7X7L0/458-587              --DDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQSRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
F6HZH9/447-577              --DNDILDILPENLLESIREKERKAIEEQDPAISQAKRRREMIVGLPKLFNMIHFLFQSINRSVVTKEELMHKILASHCDIVDRREVEEQLKLLQELVPEWISEKLASSGDLLLCIKKTSSPESIRQRLMEAK-----
K7LZ99/490-619              N-KDDISDTLQEEFIQSIREKERLAMEERDPAITQAKKRKKNIASIPKLFDMIRGLLR--QRNCITKAELVSKIISTRCDIADRSEVEEQLNLLQELAPEWIYEKHVYSGDLLLFINKMLSPETVRASLEEAT-----
R0G1L8/474-578              ---------------------------------SLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELLHKIIAGHSDITDRKEVEEQLVLLQELVPEWMSEKKSSSGDVLVCINKLASPLTIRARLEEVNKQEIA
K7W6L5/437-571              SADDDLLSFLPQSLLQSVKEKEDRALVEKESGFADQVRRQKLIASLPSTFDVVFLIYQSRQRSVMTKQELVHKIIASSPKIADRSEVEGHLTLLKELVPDWFSEKTARSGDALCCVDATLSQSEIRQRLYAAA---AA
I1IVK3/445-575              D-DDELLSFLPKSLLQSVKEKEKRALEEKETGFAGQVQRQKLIASLPSTFDIIFLIYQSKQRSVMTKQELIHKITASNPKIVDRGEVEEQLRLLQEFVPEWISEKTARTGDVLCCVDTALSQAEIRQRLYGA------
D7LD12/348-452              ---------------------------------SLAKRRREMIACLPKLFDVIHYIIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILMQELVPEWMSEKRSSSEDLLVFINKLASPLTIRSRLEEENKQEMA
A0A0E0KMY3/461-590          --DDELLSFLPKSLLQSVKDKENRALEEKQTGFADRIKREKLIASLPSIFDIIFLIYQSRQRSVMTKQELIHKIIASNPKIVDRGEVEDELKLLEEIVPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
A0A0D9ZH69/462-591          --DDELLNFLPKSLLQSVKDKENRALEEKQTGFADRIKREKLIASLPSIFDIIFLIYQSRQRSVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
A0A0E0DAY9/453-582          --DDELLSFLPKSLLQSVKDKENRALEEKQTGFADRIKREKLIASLPSIFDIIFLIYQSRQRSVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
I1PJ63/458-587              --DDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQSRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
A0A0E0P5K0/456-585          --DDELLSFLPKSLLQSVKDKENRALEEKQTGFADRIKREKLIASLPSIFDIIFLIYQSRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
A0A0D3FSR5/458-587          --DDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQSRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
J3LVT2/315-444              --DDELLSFLPKSLLQSVKSKEKRALEEKQTGFADRIKREKLIASLPSIFDIIFLIYQSRQRSVMTKQELIHKIIASNPKIVDRGEVEDQLRLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
A0A0E0GB49/455-584          --DDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQSRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
A2XQU2/455-584              --DDELLSFLPKSLLQSVKDKENRALVEKQTGFADHIKREKLIASLPSIFDIIFLIYQSRQRTVMTKQELIHKIIASNPKIVDRGEVEDQLKLLEEIIPDWISEKTARTGDVLCCVDTAMSQAEIRQRLYAA------
I1L8C7/467-596              N-KDDIFDTLQESTIQSIREKERLAMEKRDPAITEAKKRKKNIASLPKLFDMIRGLLR--QRNCITKAELVSKIISSRCDIADRSEVEEQLNLLQELAPEWISEKQVSSGDLLLFINKMLSPETVRASLEEAT-----
D7LD11/467-571              ---------------------------------SLAKRRRKMIACLPKLFNVIHYLIQSIRRWVITKEELVHKIIAGHSDITDRKEVEEQLILLQELVPEWMSEKKSSSGDVLVCINKLASPITIRSRLEEENKQEMA
#=GC scorecons              003333222432333343324422432332222534469575985895596684464763693769959967997755459599499968939869669796899454689694676544953589479455100001
#=GC scorecons_70           _____________________________________**_*_**_**__**_*__*_**__*_****_********____*_**_******_**_*__*******____****_**____*___**_**_________
#=GC scorecons_80           ______________________________________*_*_**_**__*__*____*___*___**_**_*****____*_**_***_**_**_*__*_*_***____**_*_______*___**_**_________
#=GC scorecons_90           ______________________________________*___**_**__*__*________*___**_**__**______*_**_***_**_**_*__*_*__**____**_*_______*____*__*_________
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