# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/000875
#=GF DE Pre-mRNA-splicing helicase BRR2
#=GF AC 1.10.10.10/FF/000875
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 76.002
#=GS 5lj5B09/1744-1846     AC P32639
#=GS 5lj5B09/1744-1846     OS Saccharomyces cerevisiae S288C
#=GS 5lj5B09/1744-1846     DE Pre-mRNA-splicing helicase BRR2
#=GS 5lj5B09/1744-1846     DR CATH; 5lj5; B:1744-1846; 
#=GS 5lj5B09/1744-1846     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5lj5B09/1744-1846     DR GO; GO:0000388; GO:0003724; GO:0005515; GO:0005634; GO:0005682; GO:0042802; GO:0046540; 
#=GS 5lj5B09/1744-1846     DR EC; 3.6.4.13; 
#=GS 3jcmN09/1744-1825     AC P32639
#=GS 3jcmN09/1744-1825     OS Saccharomyces cerevisiae S288C
#=GS 3jcmN09/1744-1825     DE Pre-mRNA-splicing helicase BRR2
#=GS 3jcmN09/1744-1825     DR CATH; 3jcm; N:1744-1825; 
#=GS 3jcmN09/1744-1825     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 3jcmN09/1744-1825     DR GO; GO:0000388; GO:0003724; GO:0005515; GO:0005634; GO:0005682; GO:0042802; GO:0046540; 
#=GS 3jcmN09/1744-1825     DR EC; 3.6.4.13; 
#=GS 5gaoB09/1744-1846     AC P32639
#=GS 5gaoB09/1744-1846     OS Saccharomyces cerevisiae S288C
#=GS 5gaoB09/1744-1846     DE Pre-mRNA-splicing helicase BRR2
#=GS 5gaoB09/1744-1846     DR CATH; 5gao; B:1744-1846; 
#=GS 5gaoB09/1744-1846     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5gaoB09/1744-1846     DR GO; GO:0000388; GO:0003724; GO:0005515; GO:0005634; GO:0005682; GO:0042802; GO:0046540; 
#=GS 5gaoB09/1744-1846     DR EC; 3.6.4.13; 
#=GS 5ganB10/1744-1846     AC P32639
#=GS 5ganB10/1744-1846     OS Saccharomyces cerevisiae S288C
#=GS 5ganB10/1744-1846     DE Pre-mRNA-splicing helicase BRR2
#=GS 5ganB10/1744-1846     DR CATH; 5gan; B:1744-1846; 
#=GS 5ganB10/1744-1846     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5ganB10/1744-1846     DR GO; GO:0000388; GO:0003724; GO:0005515; GO:0005634; GO:0005682; GO:0042802; GO:0046540; 
#=GS 5ganB10/1744-1846     DR EC; 3.6.4.13; 
#=GS 5dcaA11/1538-1642     AC P32639
#=GS 5dcaA11/1538-1642     OS Saccharomyces cerevisiae S288C
#=GS 5dcaA11/1538-1642     DE Pre-mRNA-splicing helicase BRR2
#=GS 5dcaA11/1538-1642     DR CATH; 5dca; A:1741-1857; 
#=GS 5dcaA11/1538-1642     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 5dcaA11/1538-1642     DR GO; GO:0000388; GO:0003724; GO:0005515; GO:0005634; GO:0005682; GO:0042802; GO:0046540; 
#=GS 5dcaA11/1538-1642     DR EC; 3.6.4.13; 
#=GS 4bgdA09/1303-1405     AC P32639
#=GS 4bgdA09/1303-1405     OS Saccharomyces cerevisiae S288C
#=GS 4bgdA09/1303-1405     DE Pre-mRNA-splicing helicase BRR2
#=GS 4bgdA09/1303-1405     DR CATH; 4bgd; A:1744-1846; 
#=GS 4bgdA09/1303-1405     DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS 4bgdA09/1303-1405     DR GO; GO:0000388; GO:0003724; GO:0005515; GO:0005634; GO:0005682; GO:0042802; GO:0046540; 
#=GS 4bgdA09/1303-1405     DR EC; 3.6.4.13; 
#=GS P32639/1744-1846      AC P32639
#=GS P32639/1744-1846      OS Saccharomyces cerevisiae S288C
#=GS P32639/1744-1846      DE Pre-mRNA-splicing helicase BRR2
#=GS P32639/1744-1846      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS P32639/1744-1846      DR GO; GO:0000388; GO:0003724; GO:0005515; GO:0005634; GO:0005682; GO:0042802; GO:0046540; 
#=GS P32639/1744-1846      DR EC; 3.6.4.13; 
#=GS A0BKV6/1651-1746      AC A0BKV6
#=GS A0BKV6/1651-1746      OS Paramecium tetraurelia
#=GS A0BKV6/1651-1746      DE Uncharacterized protein
#=GS A0BKV6/1651-1746      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GS R9XKM3/1740-1841      AC R9XKM3
#=GS R9XKM3/1740-1841      OS Saccharomycetaceae sp. 'Ashbya aceri'
#=GS R9XKM3/1740-1841      DE AaceriAGR113Wp
#=GS R9XKM3/1740-1841      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomycetaceae sp. 'Ashbya aceri'; 
#=GS Q74ZT5/1740-1844      AC Q74ZT5
#=GS Q74ZT5/1740-1844      OS Eremothecium gossypii ATCC 10895
#=GS Q74ZT5/1740-1844      DE AGR113Wp
#=GS Q74ZT5/1740-1844      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Eremothecium; Eremothecium gossypii; 
#=GS A0A0L8VRE9/1743-1845  AC A0A0L8VRE9
#=GS A0A0L8VRE9/1743-1845  OS Saccharomyces sp. 'boulardii'
#=GS A0A0L8VRE9/1743-1845  DE BRR2p RNA-dependent ATPase RNA helicase (DEIH box)
#=GS A0A0L8VRE9/1743-1845  DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces sp. 'boulardii'; 
#=GS N1P3P9/1744-1846      AC N1P3P9
#=GS N1P3P9/1744-1846      OS Saccharomyces cerevisiae CEN.PK113-7D
#=GS N1P3P9/1744-1846      DE Brr2p
#=GS N1P3P9/1744-1846      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS N1P3P9/1744-1846      DR EC; 3.6.4.13; 
#=GS B3LRT1/1743-1845      AC B3LRT1
#=GS B3LRT1/1743-1845      OS Saccharomyces cerevisiae RM11-1a
#=GS B3LRT1/1743-1845      DE DEIH-box ATPase
#=GS B3LRT1/1743-1845      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS G2WD58/1744-1846      AC G2WD58
#=GS G2WD58/1744-1846      OS Saccharomyces cerevisiae Kyokai no. 7
#=GS G2WD58/1744-1846      DE K7_Brr2p
#=GS G2WD58/1744-1846      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A6ZRC8/1743-1845      AC A6ZRC8
#=GS A6ZRC8/1743-1845      OS Saccharomyces cerevisiae YJM789
#=GS A6ZRC8/1743-1845      DE DEIH-box ATPase
#=GS A6ZRC8/1743-1845      DR ORG; Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces; Saccharomyces cerevisiae; 
#=GS A0BQ90/1652-1747      AC A0BQ90
#=GS A0BQ90/1652-1747      OS Paramecium tetraurelia
#=GS A0BQ90/1652-1747      DE Uncharacterized protein
#=GS A0BQ90/1652-1747      DR ORG; Eukaryota; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculida; Parameciidae; Paramecium; Paramecium tetraurelia; 
#=GF SQ 16
5lj5B09/1744-1846             ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
3jcmN09/1744-1825             ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDT--------------------------------
5gaoB09/1744-1846             ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
5ganB10/1744-1846             ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
5dcaA11/1538-1642             PTESYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAE------------TEIISTLSNGLIASHYG
4bgdA09/1303-1405             ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
P32639/1744-1846              ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
A0BKV6/1651-1746              PIESHLNHHLANHLNAEIVAKNIHNTQDCIDWITWTFMYRRLTQNPNYYNLHEVNGVAINNYLSELIETTIDELHESKCIAVEE-------------DNELEAINS--GII------
R9XKM3/1740-1841              PTESYMLFYLHDGLINDIAMAVIESKQDCVDWITFTYFYRRIHANPSFYGVKDTSPLGISAYLTGLVQDTLDDLVDSSIVEIINEKQD------------DELISPLNGCMISS---
Q74ZT5/1740-1844              PTESYMLYYLHDGLINDIATSVIESKQDCVDWITFTYFYRRIHANPSFYGVKDTSPLGISAYLTGLVQDTLDDLVDSSIIEITNPKED---------ENEDEQILPLNGCMISS---
A0A0L8VRE9/1743-1845          ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
N1P3P9/1744-1846              ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
B3LRT1/1743-1845              ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
G2WD58/1744-1846              ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
A6ZRC8/1743-1845              ---SYLQYIIHDTLNNEIANSIIQSKQDCVDWFTYSYFYRRIHVNPSYYGVRDTSPHGISVFLSNLVETCLNDLVESSFIEIDDTEAEVTAEVNGGDDEATEIIST-----------
A0BQ90/1652-1747              PIESHLNHNLANHLNAEIVAKNIHNTQDCIDWITWTFMYRRLTQNPNYYSLHEINGVAINNYLSELIETTIDELHESKCIAVEE-------------DNELEAINS--GII------
#=GC scorecons                212977464667496679645595669997995956769997649967967676664696479759776576795796486756322311111111143237374400101000000
#=GC scorecons_70             ___***_*_*_*_******___*_********_*__*******_*******_****_***_***_****_****_***_***___________________*_*_____________
#=GC scorecons_80             ___***_______*__**____*___******_*__*_***___**_**___*_____*__**__***____**_**__*_*___________________*_*_____________
#=GC scorecons_90             ___*_________*___*____*___***_**_*____***___**__*_________*___*__*_______*__*__*_____________________________________
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