# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/000772
#=GF DE ECF RNA polymerase sigma factor SigM
#=GF AC 1.10.10.10/FF/000772
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 14.456
#=GS O53590/131-187      AC O53590
#=GS O53590/131-187      OS Mycobacterium tuberculosis H37Rv
#=GS O53590/131-187      DE ECF RNA polymerase sigma factor SigM
#=GS O53590/131-187      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS O53590/131-187      DR GO; GO:0005886; GO:0009410; GO:0009415; GO:0045893; 
#=GS A0A1A0M9W2/120-179  AC A0A1A0M9W2
#=GS A0A1A0M9W2/120-179  OS Mycobacterium sp. 1164966.3
#=GS A0A1A0M9W2/120-179  DE RNA polymerase sigma factor SigM
#=GS A0A1A0M9W2/120-179  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium sp. 1164966.3; 
#=GS A0A1X0GJI0/123-179  AC A0A1X0GJI0
#=GS A0A1X0GJI0/123-179  OS Mycobacterium noviomagense
#=GS A0A1X0GJI0/123-179  DE RNA polymerase sigma factor SigM
#=GS A0A1X0GJI0/123-179  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium noviomagense; 
#=GS A0A120J3N8/131-187  AC A0A120J3N8
#=GS A0A120J3N8/131-187  OS Mycobacterium tuberculosis variant africanum
#=GS A0A120J3N8/131-187  DE ECF RNA polymerase sigma factor SigM
#=GS A0A120J3N8/131-187  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0K2I2Y3/131-187  AC A0A0K2I2Y3
#=GS A0A0K2I2Y3/131-187  OS Mycobacterium tuberculosis variant bovis BCG
#=GS A0A0K2I2Y3/131-187  DE ECF RNA polymerase sigma factor SigM
#=GS A0A0K2I2Y3/131-187  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A045KCY9/131-187  AC A0A045KCY9
#=GS A0A045KCY9/131-187  OS Mycobacterium tuberculosis
#=GS A0A045KCY9/131-187  DE ECF RNA polymerase sigma factor SigM
#=GS A0A045KCY9/131-187  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A328H036/131-187  AC A0A328H036
#=GS A0A328H036/131-187  OS Mycobacterium tuberculosis variant pinnipedii
#=GS A0A328H036/131-187  DE ECF RNA polymerase sigma factor SigM
#=GS A0A328H036/131-187  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0G2PF27/131-187  AC A0A0G2PF27
#=GS A0A0G2PF27/131-187  OS Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2
#=GS A0A0G2PF27/131-187  DE Possible Alternative RNA polymerase sigma factor sigma [first part]
#=GS A0A0G2PF27/131-187  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A5U9N9/131-187      AC A5U9N9
#=GS A5U9N9/131-187      OS Mycobacterium tuberculosis H37Ra
#=GS A5U9N9/131-187      DE RNA polymerase sigma-70 factor
#=GS A5U9N9/131-187      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS Q8VIQ8/131-187      AC Q8VIQ8
#=GS Q8VIQ8/131-187      OS Mycobacterium tuberculosis CDC1551
#=GS Q8VIQ8/131-187      DE RNA polymerase sigma-70 factor, ECF subfamily
#=GS Q8VIQ8/131-187      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0E9A437/131-187  AC A0A0E9A437
#=GS A0A0E9A437/131-187  OS Mycobacterium tuberculosis
#=GS A0A0E9A437/131-187  DE RNA polymerase alternative sigma factor sigM
#=GS A0A0E9A437/131-187  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS H8F2P4/131-187      AC H8F2P4
#=GS H8F2P4/131-187      OS Mycobacterium tuberculosis str. Erdman = ATCC 35801
#=GS H8F2P4/131-187      DE ECF RNA polymerase sigma factor SigM
#=GS H8F2P4/131-187      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GF SQ 12
O53590/131-187              ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
A0A1A0M9W2/120-179          AILVHRALMRLPVEQRAAVVAVDMEGYSIADTARLLGIAEGTVKSRCARARARLADLLGY
A0A1X0GJI0/123-179          ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLAALLGY
A0A120J3N8/131-187          ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
A0A0K2I2Y3/131-187          ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
A0A045KCY9/131-187          ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
A0A328H036/131-187          ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
A0A0G2PF27/131-187          ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
A5U9N9/131-187              ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
Q8VIQ8/131-187              ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
A0A0E9A437/131-187          ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
H8F2P4/131-187              ---VQRALMRLPVEQRAAVVAVDMQGYSIADTARMLGVAEGTVKSRCARARARLARLLGY
#=GC scorecons              000969999999999999999999599999999969969999999999999999949999
#=GC scorecons_70           ___*********************_******************************_****
#=GC scorecons_80           ___*_*******************_*********_**_*****************_****
#=GC scorecons_90           ___*_*******************_*********_**_*****************_****
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