# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/000737
#=GF DE Forkhead domain 3F
#=GF AC 1.10.10.10/FF/000737
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 20.961
#=GS Q9W4Q1/386-480      AC Q9W4Q1
#=GS Q9W4Q1/386-480      OS Drosophila melanogaster
#=GS Q9W4Q1/386-480      DE Forkhead domain 3F
#=GS Q9W4Q1/386-480      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q9W4Q1/386-480      DR GO; GO:0000976; 
#=GS A0A1I8P571/380-473  AC A0A1I8P571
#=GS A0A1I8P571/380-473  OS Stomoxys calcitrans
#=GS A0A1I8P571/380-473  DE Uncharacterized protein
#=GS A0A1I8P571/380-473  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Muscoidea; Muscidae; Muscinae; Stomoxyini; Stomoxys; Stomoxys calcitrans; 
#=GS B4MAP0/354-447      AC B4MAP0
#=GS B4MAP0/354-447      OS Drosophila virilis
#=GS B4MAP0/354-447      DE Uncharacterized protein
#=GS B4MAP0/354-447      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4JXA5/1-91         AC B4JXA5
#=GS B4JXA5/1-91         OS Drosophila grimshawi
#=GS B4JXA5/1-91         DE GH17913
#=GS B4JXA5/1-91         DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4Q0I1/384-478      AC B4Q0I1
#=GS B4Q0I1/384-478      OS Drosophila yakuba
#=GS B4Q0I1/384-478      DE Uncharacterized protein
#=GS B4Q0I1/384-478      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B3NSR8/394-488      AC B3NSR8
#=GS B3NSR8/394-488      OS Drosophila erecta
#=GS B3NSR8/394-488      DE Uncharacterized protein
#=GS B3NSR8/394-488      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4NDL2/323-417      AC B4NDL2
#=GS B4NDL2/323-417      OS Drosophila willistoni
#=GS B4NDL2/323-417      DE Uncharacterized protein
#=GS B4NDL2/323-417      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS A0A1W4UP10/421-515  AC A0A1W4UP10
#=GS A0A1W4UP10/421-515  OS Drosophila ficusphila
#=GS A0A1W4UP10/421-515  DE homeobox protein 5
#=GS A0A1W4UP10/421-515  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ficusphila subgroup; Drosophila ficusphila; 
#=GS B4H2R5/447-541      AC B4H2R5
#=GS B4H2R5/447-541      OS Drosophila persimilis
#=GS B4H2R5/447-541      DE GL26743
#=GS B4H2R5/447-541      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS B4L733/367-460      AC B4L733
#=GS B4L733/367-460      OS Drosophila mojavensis
#=GS B4L733/367-460      DE Uncharacterized protein
#=GS B4L733/367-460      DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS A0A0R3P364/444-538  AC A0A0R3P364
#=GS A0A0R3P364/444-538  OS Drosophila pseudoobscura pseudoobscura
#=GS A0A0R3P364/444-538  DE Uncharacterized protein, isoform B
#=GS A0A0R3P364/444-538  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS A0A0P8XXC2/406-500  AC A0A0P8XXC2
#=GS A0A0P8XXC2/406-500  OS Drosophila ananassae
#=GS A0A0P8XXC2/406-500  DE Uncharacterized protein
#=GS A0A0P8XXC2/406-500  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS A0A3B0K5V4/441-535  AC A0A3B0K5V4
#=GS A0A3B0K5V4/441-535  OS Drosophila guanche
#=GS A0A3B0K5V4/441-535  DE Blast:Forkhead transcription factor HCM1
#=GS A0A3B0K5V4/441-535  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; obscura subgroup; Drosophila guanche; 
#=GF SQ 13
Q9W4Q1/386-480              AEHVVVEDTSS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
A0A1I8P571/380-473          ---VVIEDTSSPPRVPKKPPFTYTELIEYALEDKGELTVSGIYTWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGHKAPQGAGHLWTISSGDSAE
B4MAP0/354-447              -EHVVIEDTTS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
B4JXA5/1-91                 ----STNHRKT--SRPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
B4Q0I1/384-478              AEHVVVEDTSS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
B3NSR8/394-488              AEHVVVEDTSS--KTPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
B4NDL2/323-417              AEHVVVEDTTS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
A0A1W4UP10/421-515          AEHVVVEDTSS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
B4H2R5/447-541              AEHVVVEDTTS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
B4L733/367-460              -EHVVVEDTAS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
A0A0R3P364/444-538          AEHVVVEDTTS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
A0A0P8XXC2/406-500          AEHVVVEDTTS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
A0A3B0K5V4/441-535          AEHVVVEDTTS--KAPKKPPFTYTELIEYALEDKGELTVSGIYQWISDRFPYYKSNDDRWKNSVRHNLSINPHFRKGVKAPQGAGHLWAISSGDSAE
#=GC scorecons              1335656664600549999999999999999999999999999699999999999999999999999999999999969999999999799999999
#=GC scorecons_70           ____*_***_*____**************************************************************_*******************
#=GC scorecons_80           _______________****************************_*********************************_*******************
#=GC scorecons_90           _______________****************************_*********************************_**********_********
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