# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/000633
#=GF DE U5 small nuclear ribonucleoprotein-specific protein
#=GF AC 1.10.10.10/FF/000633
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 7.944
#=GS Q8IFP1/1211-1272_1345-1378      AC Q8IFP1
#=GS Q8IFP1/1211-1272_1345-1378      OS Plasmodium falciparum 3D7
#=GS Q8IFP1/1211-1272_1345-1378      DE Pre-mRNA-splicing helicase BRR2, putative
#=GS Q8IFP1/1211-1272_1345-1378      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS Q8IFP1/1211-1272_1345-1378      DR GO; GO:0000375; GO:0003724; GO:0005681; 
#=GS A0A060RP58/1187-1251_1306-1339  AC A0A060RP58
#=GS A0A060RP58/1187-1251_1306-1339  OS Plasmodium reichenowi
#=GS A0A060RP58/1187-1251_1306-1339  DE U5 small nuclear ribonucleoprotein-specific protein, putative
#=GS A0A060RP58/1187-1251_1306-1339  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS W4IM20/1188-1249_1311-1344      AC W4IM20
#=GS W4IM20/1188-1249_1311-1344      OS Plasmodium falciparum NF135/5.C10
#=GS W4IM20/1188-1249_1311-1344      DE Uncharacterized protein
#=GS W4IM20/1188-1249_1311-1344      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024WX52/1208-1269_1342-1375  AC A0A024WX52
#=GS A0A024WX52/1208-1269_1342-1375  OS Plasmodium falciparum MaliPS096_E11
#=GS A0A024WX52/1208-1269_1342-1375  DE Uncharacterized protein
#=GS A0A024WX52/1208-1269_1342-1375  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7M1I1/1189-1250_1312-1345  AC A0A0L7M1I1
#=GS A0A0L7M1I1/1189-1250_1312-1345  OS Plasmodium falciparum Dd2
#=GS A0A0L7M1I1/1189-1250_1312-1345  DE Uncharacterized protein
#=GS A0A0L7M1I1/1189-1250_1312-1345  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VCR1/1189-1250_1312-1345  AC A0A024VCR1
#=GS A0A024VCR1/1189-1250_1312-1345  OS Plasmodium falciparum Vietnam Oak-Knoll (FVO)
#=GS A0A024VCR1/1189-1250_1312-1345  DE Uncharacterized protein
#=GS A0A024VCR1/1189-1250_1312-1345  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A024VHL7/1199-1263_1312-1345  AC A0A024VHL7
#=GS A0A024VHL7/1199-1263_1312-1345  OS Plasmodium falciparum FCH/4
#=GS A0A024VHL7/1199-1263_1312-1345  DE Uncharacterized protein
#=GS A0A024VHL7/1199-1263_1312-1345  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7F6I0/1197-1258_1332-1365      AC W7F6I0
#=GS W7F6I0/1197-1258_1332-1365      OS Plasmodium falciparum 7G8
#=GS W7F6I0/1197-1258_1332-1365      DE Uncharacterized protein
#=GS W7F6I0/1197-1258_1332-1365      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L0CSU8/1128-1189_1251-1284  AC A0A0L0CSU8
#=GS A0A0L0CSU8/1128-1189_1251-1284  OS Plasmodium falciparum RAJ116
#=GS A0A0L0CSU8/1128-1189_1251-1284  DE U5 small nuclear ribonucleoprotein-specific protein
#=GS A0A0L0CSU8/1128-1189_1251-1284  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W4J713/1217-1278_1351-1384      AC W4J713
#=GS W4J713/1217-1278_1351-1384      OS Plasmodium falciparum Palo Alto/Uganda
#=GS W4J713/1217-1278_1351-1384      DE Uncharacterized protein
#=GS W4J713/1217-1278_1351-1384      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A151LSN5/1188-1251_1312-1345  AC A0A151LSN5
#=GS A0A151LSN5/1188-1251_1312-1345  OS Plasmodium reichenowi
#=GS A0A151LSN5/1188-1251_1312-1345  DE Pre-mRNA-splicing helicase BRR2, putative
#=GS A0A151LSN5/1188-1251_1312-1345  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium reichenowi; 
#=GS A0A024XCD0/1197-1261_1309-1342  AC A0A024XCD0
#=GS A0A024XCD0/1197-1261_1309-1342  OS Plasmodium falciparum CAMP/Malaysia
#=GS A0A024XCD0/1197-1261_1309-1342  DE Uncharacterized protein
#=GS A0A024XCD0/1197-1261_1309-1342  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7KA00/1216-1277_1350-1383      AC W7KA00
#=GS W7KA00/1216-1277_1350-1383      OS Plasmodium falciparum NF54
#=GS W7KA00/1216-1277_1350-1383      DE Uncharacterized protein
#=GS W7KA00/1216-1277_1350-1383      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L7K9Y3/1210-1271_1333-1366  AC A0A0L7K9Y3
#=GS A0A0L7K9Y3/1210-1271_1333-1366  OS Plasmodium falciparum HB3
#=GS A0A0L7K9Y3/1210-1271_1333-1366  DE Uncharacterized protein
#=GS A0A0L7K9Y3/1210-1271_1333-1366  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7G3H0/1212-1273_1346-1379      AC W7G3H0
#=GS W7G3H0/1212-1273_1346-1379      OS Plasmodium falciparum Santa Lucia
#=GS W7G3H0/1212-1273_1346-1379      DE Uncharacterized protein
#=GS W7G3H0/1212-1273_1346-1379      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A2I0BZR8/1211-1272_1345-1378  AC A0A2I0BZR8
#=GS A0A2I0BZR8/1211-1272_1345-1378  OS Plasmodium falciparum NF54
#=GS A0A2I0BZR8/1211-1272_1345-1378  DE Pre-mRNA-splicing helicase BRR2
#=GS A0A2I0BZR8/1211-1272_1345-1378  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS A0A0L1IBQ1/1197-1258_1321-1354  AC A0A0L1IBQ1
#=GS A0A0L1IBQ1/1197-1258_1321-1354  OS Plasmodium falciparum IGH-CR14
#=GS A0A0L1IBQ1/1197-1258_1321-1354  DE U5 small nuclear ribonucleoprotein-specific protein
#=GS A0A0L1IBQ1/1197-1258_1321-1354  DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GS W7JTG3/1167-1228_1301-1334      AC W7JTG3
#=GS W7JTG3/1167-1228_1301-1334      OS Plasmodium falciparum UGT5.1
#=GS W7JTG3/1167-1228_1301-1334      DE Uncharacterized protein
#=GS W7JTG3/1167-1228_1301-1334      DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania); Plasmodium falciparum; 
#=GF SQ 18
Q8IFP1/1211-1272_1345-1378              ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A060RP58/1187-1251_1306-1339          ESTLLNNIVNIINAEIVLKNIQNMDDAMNWLEQTYMYIRMLKCPSLYGVTINSNDKIKGIEEFKDEKIKRRMYNILYSCFLILEKYDLIKYNRKLNTVS
W4IM20/1188-1249_1311-1344              ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A024WX52/1208-1269_1342-1375          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A0L7M1I1/1189-1250_1312-1345          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A024VCR1/1189-1250_1312-1345          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A024VHL7/1199-1263_1312-1345          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEEFKDEKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
W7F6I0/1197-1258_1332-1365              ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A0L0CSU8/1128-1189_1251-1284          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
W4J713/1217-1278_1351-1384              ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A151LSN5/1188-1251_1312-1345          ESTLLNNIVNIINAEIVLKNIQNMDDAMNWLEQTYMYIRMLKCPSLYGVTINSNDKIKGIEEFK-EKIKRRMYNILYSCFLILEKYDLIKYNRKLNTVS
A0A024XCD0/1197-1261_1309-1342          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEEFKDEKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
W7KA00/1216-1277_1350-1383              ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A0L7K9Y3/1210-1271_1333-1366          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
W7G3H0/1212-1273_1346-1379              ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A2I0BZR8/1211-1272_1345-1378          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
A0A0L1IBQ1/1197-1258_1321-1354          ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
W7JTG3/1167-1228_1301-1334              ESTLLHNIVNIINAEIVLKNIQNMDDAMNWLEHTYMYIRMLKCPSLYGVIINSNDKIKGIEE---EKIKRRMYNILYSCFLILEKYDLIKYNKKLNTVS
#=GC scorecons                          999996999999999999999999999999997999999999999999969999999999992209999999999999999999999999997999999
#=GC scorecons_70                       **************************************************************___**********************************
#=GC scorecons_80                       *****_**************************_****************_************___**********************************
#=GC scorecons_90                       *****_**************************_****************_************___***************************_******
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