# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/000584
#=GF DE RNA polymerase sigma factor
#=GF AC 1.10.10.10/FF/000584
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 29.991
#=GS P9WGG9/133-212      AC P9WGG9
#=GS P9WGG9/133-212      OS Mycobacterium tuberculosis H37Rv
#=GS P9WGG9/133-212      DE ECF RNA polymerase sigma factor SigD
#=GS P9WGG9/133-212      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P9WGG9/133-212      DR GO; GO:0009405; GO:0009408; GO:0016987; 
#=GS A0A447GAE7/108-191  AC A0A447GAE7
#=GS A0A447GAE7/108-191  OS Mycobacterium basiliense
#=GS A0A447GAE7/108-191  DE RNA polymerase sigma factor
#=GS A0A447GAE7/108-191  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium basiliense; 
#=GS A0A1A3NHS3/109-191  AC A0A1A3NHS3
#=GS A0A1A3NHS3/109-191  OS Mycobacterium asiaticum
#=GS A0A1A3NHS3/109-191  DE RNA polymerase sigma factor
#=GS A0A1A3NHS3/109-191  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium asiaticum; 
#=GS X7Z6Z6/87-166       AC X7Z6Z6
#=GS X7Z6Z6/87-166       OS Mycobacterium kansasii 732
#=GS X7Z6Z6/87-166       DE RNA polymerase sigma factor
#=GS X7Z6Z6/87-166       DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS A0A1E3SL11/108-191  AC A0A1E3SL11
#=GS A0A1E3SL11/108-191  OS Mycobacterium intermedium
#=GS A0A1E3SL11/108-191  DE RNA polymerase sigma factor
#=GS A0A1E3SL11/108-191  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium simiae complex; Mycobacterium intermedium; 
#=GS A0A1A0M698/102-181  AC A0A1A0M698
#=GS A0A1A0M698/102-181  OS Mycobacterium sp. 1164966.3
#=GS A0A1A0M698/102-181  DE RNA polymerase sigma factor
#=GS A0A1A0M698/102-181  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium sp. 1164966.3; 
#=GS A0A1X0K9Z5/108-191  AC A0A1X0K9Z5
#=GS A0A1X0K9Z5/108-191  OS Mycobacterium shinjukuense
#=GS A0A1X0K9Z5/108-191  DE RNA polymerase sigma factor
#=GS A0A1X0K9Z5/108-191  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium shinjukuense; 
#=GS A0A1X1R8L9/101-181  AC A0A1X1R8L9
#=GS A0A1X1R8L9/101-181  OS Mycobacterium bohemicum
#=GS A0A1X1R8L9/101-181  DE RNA polymerase sigma factor
#=GS A0A1X1R8L9/101-181  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium bohemicum; 
#=GS A0A1A2WS15/102-181  AC A0A1A2WS15
#=GS A0A1A2WS15/102-181  OS Mycobacterium sp. E2327
#=GS A0A1A2WS15/102-181  DE RNA polymerase sigma factor
#=GS A0A1A2WS15/102-181  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium sp. E2327; 
#=GS A0A1A3QRZ3/102-181  AC A0A1A3QRZ3
#=GS A0A1A3QRZ3/102-181  OS Mycobacterium sp. 1081908.1
#=GS A0A1A3QRZ3/102-181  DE RNA polymerase sigma factor
#=GS A0A1A3QRZ3/102-181  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium sp. 1081908.1; 
#=GS A0A1A3HV33/98-181   AC A0A1A3HV33
#=GS A0A1A3HV33/98-181   OS Mycobacterium sp. 1423905.2
#=GS A0A1A3HV33/98-181   DE RNA polymerase sigma factor
#=GS A0A1A3HV33/98-181   DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium sp. 1423905.2; 
#=GS A0A0I9TK63/102-181  AC A0A0I9TK63
#=GS A0A0I9TK63/102-181  OS Mycobacterium haemophilum
#=GS A0A0I9TK63/102-181  DE RNA polymerase sigma factor
#=GS A0A0I9TK63/102-181  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium haemophilum; 
#=GS G0TIS5/133-212      AC G0TIS5
#=GS G0TIS5/133-212      OS Mycobacterium canettii CIPT 140010059
#=GS G0TIS5/133-212      DE RNA polymerase sigma factor
#=GS G0TIS5/133-212      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium canettii; 
#=GS X7Y935/112-191      AC X7Y935
#=GS X7Y935/112-191      OS Mycobacterium kansasii 824
#=GS X7Y935/112-191      DE RNA polymerase sigma factor
#=GS X7Y935/112-191      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS A0A1V3XZS1/112-191  AC A0A1V3XZS1
#=GS A0A1V3XZS1/112-191  OS Mycobacterium kansasii
#=GS A0A1V3XZS1/112-191  DE RNA polymerase sigma factor
#=GS A0A1V3XZS1/112-191  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS U5WWE9/112-191      AC U5WWE9
#=GS U5WWE9/112-191      OS Mycobacterium kansasii ATCC 12478
#=GS U5WWE9/112-191      DE RNA polymerase sigma factor
#=GS U5WWE9/112-191      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS A0A045I7Y6/133-212  AC A0A045I7Y6
#=GS A0A045I7Y6/133-212  OS Mycobacterium tuberculosis
#=GS A0A045I7Y6/133-212  DE RNA polymerase sigma factor
#=GS A0A045I7Y6/133-212  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0H3M932/133-212  AC A0A0H3M932
#=GS A0A0H3M932/133-212  OS Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2
#=GS A0A0H3M932/133-212  DE RNA polymerase sigma factor
#=GS A0A0H3M932/133-212  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A328G7K5/133-212  AC A0A328G7K5
#=GS A0A328G7K5/133-212  OS Mycobacterium tuberculosis variant pinnipedii
#=GS A0A328G7K5/133-212  DE RNA polymerase sigma factor
#=GS A0A328G7K5/133-212  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A5U889/133-212      AC A5U889
#=GS A5U889/133-212      OS Mycobacterium tuberculosis H37Ra
#=GS A5U889/133-212      DE RNA polymerase sigma factor
#=GS A5U889/133-212      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P9WGG8/133-212      AC P9WGG8
#=GS P9WGG8/133-212      OS Mycobacterium tuberculosis CDC1551
#=GS P9WGG8/133-212      DE ECF RNA polymerase sigma factor SigD
#=GS P9WGG8/133-212      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P66812/133-212      AC P66812
#=GS P66812/133-212      OS Mycobacterium tuberculosis variant bovis AF2122/97
#=GS P66812/133-212      DE ECF RNA polymerase sigma factor SigD
#=GS P66812/133-212      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GF SQ 22
P9WGG9/133-212              ----SADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A447GAE7/108-191          PERRSADADPEQLAIEADSVSRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A1A3NHS3/109-191          -ERRSVDAGPEQRAIEADSVTRMNELLEILPAKQREILVLRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLRDEIVAAGEYA
X7Z6Z6/87-166               ----SADAGPEQLAIEADSVTRMNELLEILPSKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A1E3SL11/108-191          PERRSSDAGPEQRAIEADSVSRMNDLLEILPSKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDELVAAGDYA
A0A1A0M698/102-181          ----SADAGPEQLAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A1X0K9Z5/108-191          PERRSADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVVAGDYA
A0A1X1R8L9/101-181          ---WSPDAGPEQRAIEADSVSRMSELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALARLKSEIVAAGDYA
A0A1A2WS15/102-181          ----STDAGPEQRAIEADSVSRMNELLEILPSKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALSRLKSEIVAAGDYA
A0A1A3QRZ3/102-181          ----STDAGPEQRAIEADSVSRMNELLEILPSKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALSRLKSEIVAAGDYA
A0A1A3HV33/98-181           PERRSAEAGPEQLAIEADSVSRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A0I9TK63/102-181          ----SADAGPEQLVLEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSSTGAVRVAQHRALSRLKSEIVAAGDYA
G0TIS5/133-212              ----SADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
X7Y935/112-191              ----SADAGPEQLVIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A1V3XZS1/112-191          ----SADAGPEQLVIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
U5WWE9/112-191              ----SADAGPEQLVIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A045I7Y6/133-212          ----SADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A0H3M932/133-212          ----SADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A0A328G7K5/133-212          ----SADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
A5U889/133-212              ----SADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
P9WGG8/133-212              ----SADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
P66812/133-212              ----SADAGPEQMAIEADSVTRMNELLEILPAKQREILILRVVVGLSAEETAAAVGSTTGAVRVAQHRALQRLKDEIVAAGDYA
#=GC scorecons              000195898999478999996998899999969999998999999999999999999899999999999969986989899899
#=GC scorecons_70           ____*_******_*******_*************************************************_*************
#=GC scorecons_80           ____*_******_*******_**********_**************************************_***_*********
#=GC scorecons_90           ____*_******__******_**********_**************************************_***_*********
//