# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/000545
#=GF DE RNA polymerase sigma factor
#=GF AC 1.10.10.10/FF/000545
#=GF TP FunFam
#=GF DR CATH: v4.3
#=GF DR DOPS: 25.889
#=GS 2o8xC00/1-70        AC P9WGH1
#=GS 2o8xC00/1-70        OS Mycobacterium tuberculosis H37Rv
#=GS 2o8xC00/1-70        DE ECF RNA polymerase sigma factor SigC
#=GS 2o8xC00/1-70        DR CATH; 2o8x; C:116-176; 
#=GS 2o8xC00/1-70        DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS 2o8xC00/1-70        DR GO; GO:0001666; GO:0006355; GO:0009405; GO:0009408; GO:0009410; GO:0009415; 
#=GS 2o8xB00/1-70        AC P9WGH1
#=GS 2o8xB00/1-70        OS Mycobacterium tuberculosis H37Rv
#=GS 2o8xB00/1-70        DE ECF RNA polymerase sigma factor SigC
#=GS 2o8xB00/1-70        DR CATH; 2o8x; B:116-176; 
#=GS 2o8xB00/1-70        DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS 2o8xB00/1-70        DR GO; GO:0001666; GO:0006355; GO:0009405; GO:0009408; GO:0009410; GO:0009415; 
#=GS 2o8xA00/1-70        AC P9WGH1
#=GS 2o8xA00/1-70        OS Mycobacterium tuberculosis H37Rv
#=GS 2o8xA00/1-70        DE ECF RNA polymerase sigma factor SigC
#=GS 2o8xA00/1-70        DR CATH; 2o8x; A:116-176; 
#=GS 2o8xA00/1-70        DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS 2o8xA00/1-70        DR GO; GO:0001666; GO:0006355; GO:0009405; GO:0009408; GO:0009410; GO:0009415; 
#=GS P9WGH1/116-185      AC P9WGH1
#=GS P9WGH1/116-185      OS Mycobacterium tuberculosis H37Rv
#=GS P9WGH1/116-185      DE ECF RNA polymerase sigma factor SigC
#=GS P9WGH1/116-185      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P9WGH1/116-185      DR GO; GO:0001666; GO:0006355; GO:0009405; GO:0009408; GO:0009410; GO:0009415; 
#=GS A0A1X0JUI6/376-445  AC A0A1X0JUI6
#=GS A0A1X0JUI6/376-445  OS Mycobacterium shinjukuense
#=GS A0A1X0JUI6/376-445  DE RNA polymerase sigma factor
#=GS A0A1X0JUI6/376-445  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium shinjukuense; 
#=GS A0A1A3I4V5/358-427  AC A0A1A3I4V5
#=GS A0A1A3I4V5/358-427  OS Mycobacterium sp. 1423905.2
#=GS A0A1A3I4V5/358-427  DE RNA polymerase sigma factor
#=GS A0A1A3I4V5/358-427  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium sp. 1423905.2; 
#=GS L7V7J8/115-184      AC L7V7J8
#=GS L7V7J8/115-184      OS Mycobacterium liflandii 128FXT
#=GS L7V7J8/115-184      DE RNA polymerase sigma factor
#=GS L7V7J8/115-184      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium liflandii; 
#=GS B2HFS4/115-184      AC B2HFS4
#=GS B2HFS4/115-184      OS Mycobacterium marinum M
#=GS B2HFS4/115-184      DE RNA polymerase sigma factor
#=GS B2HFS4/115-184      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium marinum; 
#=GS A0A1B4Y2W1/115-184  AC A0A1B4Y2W1
#=GS A0A1B4Y2W1/115-184  OS Mycobacterium ulcerans subsp. shinshuense
#=GS A0A1B4Y2W1/115-184  DE RNA polymerase sigma factor
#=GS A0A1B4Y2W1/115-184  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium ulcerans; Mycobacterium ulcerans subsp. shinshuense; 
#=GS A0A117DUC4/115-184  AC A0A117DUC4
#=GS A0A117DUC4/115-184  OS Mycobacterium pseudoshottsii JCM 15466
#=GS A0A117DUC4/115-184  DE RNA polymerase sigma factor
#=GS A0A117DUC4/115-184  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium pseudoshottsii; 
#=GS X7XS32/115-184      AC X7XS32
#=GS X7XS32/115-184      OS Mycobacterium kansasii 824
#=GS X7XS32/115-184      DE RNA polymerase sigma factor
#=GS X7XS32/115-184      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS A0A1A0KTL9/358-427  AC A0A1A0KTL9
#=GS A0A1A0KTL9/358-427  OS Mycobacterium sp. 1100029.7
#=GS A0A1A0KTL9/358-427  DE RNA polymerase sigma factor
#=GS A0A1A0KTL9/358-427  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium sp. 1100029.7; 
#=GS A0A1X1UWA3/355-424  AC A0A1X1UWA3
#=GS A0A1X1UWA3/355-424  OS Mycobacterium gastri
#=GS A0A1X1UWA3/355-424  DE RNA polymerase sigma factor
#=GS A0A1X1UWA3/355-424  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium gastri; 
#=GS A0PQQ3/117-186      AC A0PQQ3
#=GS A0PQQ3/117-186      OS Mycobacterium ulcerans Agy99
#=GS A0PQQ3/117-186      DE RNA polymerase sigma factor
#=GS A0PQQ3/117-186      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium ulcerans; 
#=GS X7YHK2/115-184      AC X7YHK2
#=GS X7YHK2/115-184      OS Mycobacterium kansasii 662
#=GS X7YHK2/115-184      DE RNA polymerase sigma factor
#=GS X7YHK2/115-184      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS A0A1V3WCX5/115-184  AC A0A1V3WCX5
#=GS A0A1V3WCX5/115-184  OS Mycobacterium kansasii
#=GS A0A1V3WCX5/115-184  DE RNA polymerase sigma factor
#=GS A0A1V3WCX5/115-184  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS X7YGY1/115-184      AC X7YGY1
#=GS X7YGY1/115-184      OS Mycobacterium kansasii 732
#=GS X7YGY1/115-184      DE RNA polymerase sigma factor
#=GS X7YGY1/115-184      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS A0A109SXN3/116-185  AC A0A109SXN3
#=GS A0A109SXN3/116-185  OS Mycobacterium tuberculosis variant africanum
#=GS A0A109SXN3/116-185  DE RNA polymerase sigma factor
#=GS A0A109SXN3/116-185  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0H3LAC1/116-185  AC A0A0H3LAC1
#=GS A0A0H3LAC1/116-185  OS Mycobacterium tuberculosis str. Erdman = ATCC 35801
#=GS A0A0H3LAC1/116-185  DE RNA polymerase sigma factor
#=GS A0A0H3LAC1/116-185  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A328GI68/116-185  AC A0A328GI68
#=GS A0A328GI68/116-185  OS Mycobacterium tuberculosis variant pinnipedii
#=GS A0A328GI68/116-185  DE RNA polymerase sigma factor
#=GS A0A328GI68/116-185  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0K2HX83/116-185  AC A0A0K2HX83
#=GS A0A0K2HX83/116-185  OS Mycobacterium tuberculosis variant bovis BCG
#=GS A0A0K2HX83/116-185  DE RNA polymerase sigma factor
#=GS A0A0K2HX83/116-185  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0H3M5C0/116-185  AC A0A0H3M5C0
#=GS A0A0H3M5C0/116-185  OS Mycobacterium tuberculosis variant bovis BCG str. Pasteur 1173P2
#=GS A0A0H3M5C0/116-185  DE RNA polymerase sigma factor
#=GS A0A0H3M5C0/116-185  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A5U494/116-185      AC A5U494
#=GS A5U494/116-185      OS Mycobacterium tuberculosis H37Ra
#=GS A5U494/116-185      DE RNA polymerase sigma factor
#=GS A5U494/116-185      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A045JPL9/116-185  AC A0A045JPL9
#=GS A0A045JPL9/116-185  OS Mycobacterium tuberculosis
#=GS A0A045JPL9/116-185  DE RNA polymerase sigma factor
#=GS A0A045JPL9/116-185  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P9WGH0/116-185      AC P9WGH0
#=GS P9WGH0/116-185      OS Mycobacterium tuberculosis CDC1551
#=GS P9WGH0/116-185      DE ECF RNA polymerase sigma factor SigC
#=GS P9WGH0/116-185      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS P66810/116-185      AC P66810
#=GS P66810/116-185      OS Mycobacterium tuberculosis variant bovis AF2122/97
#=GS P66810/116-185      DE Probable RNA polymerase sigma-C factor
#=GS P66810/116-185      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS U5WMC8/382-451      AC U5WMC8
#=GS U5WMC8/382-451      OS Mycobacterium kansasii ATCC 12478
#=GS U5WMC8/382-451      DE RNA polymerase sigma factor
#=GS U5WMC8/382-451      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium kansasii; 
#=GS W4I5E5/355-424      AC W4I5E5
#=GS W4I5E5/355-424      OS Mycobacterium gastri 'Wayne'
#=GS W4I5E5/355-424      DE RNA polymerase sigma factor
#=GS W4I5E5/355-424      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium gastri; 
#=GS A0A0T9XWR1/80-149   AC A0A0T9XWR1
#=GS A0A0T9XWR1/80-149   OS Mycobacterium tuberculosis
#=GS A0A0T9XWR1/80-149   DE RNA polymerase sigma factor
#=GS A0A0T9XWR1/80-149   DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GF SQ 29
2o8xC00/1-70                MGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
2o8xB00/1-70                MGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
2o8xA00/1-70                MGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
P9WGH1/116-185              RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
A0A1X0JUI6/376-445          RGFEDLVEVTAMIAQLTSDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTDRDDLTG
A0A1A3I4V5/358-427          RGFEDLVEVTTMIAQLTADQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDSLLAESDRDDLTG
L7V7J8/115-184              RGFEDLVEVTTMIAQLTSDQREALLLTQLLGLSYTDAAAVCGCPVGTIRSRVARARDALLADNERDDLTG
B2HFS4/115-184              RGFEDLVEVTTMIAQLTSDQREALLLTQLLGLSYTDAAAVCGCPVGTIRSRVARARDALLADNERDDLTG
A0A1B4Y2W1/115-184          RGFEDLVEVTTMIAQLTSDQREALLLTQLLGLSYTDAAAVCGCPVGTIRSRVARARDALLADNERDDLTG
A0A117DUC4/115-184          RGFEDLVEVTTMIAQLTSDQREALLLTQLLGLSYTDAAAVCGCPVGTIRSRVARARDALLADNERDDLTG
X7XS32/115-184              RGFEELVEVTTMIAQLTADQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTERDELTG
A0A1A0KTL9/358-427          RGFEDLVEVTAMIANLTTEQREALLLTQLLGLPYADAAAVCGCPVGTIRSRVARARDALLADADRDGLTG
A0A1X1UWA3/355-424          RGFEELVEVTTMIAQLTADQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTERDEQTG
A0PQQ3/117-186              RGFEDLVEVTTMIAQLTSDQREALLLTQLLGLSYTDAAAVCGCPVGTIRSRVARARDALLADNERDDLTG
X7YHK2/115-184              RGFEELVEVTTMIAQLTADQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTERDELTG
A0A1V3WCX5/115-184          RGFEELVEVTTMIAQLTADQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTERDELTG
X7YGY1/115-184              RGFEELVEVTTMIAQLTADQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTERDELTG
A0A109SXN3/116-185          RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
A0A0H3LAC1/116-185          RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
A0A328GI68/116-185          RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
A0A0K2HX83/116-185          RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
A0A0H3M5C0/116-185          RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
A5U494/116-185              RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
A0A045JPL9/116-185          RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
P9WGH0/116-185              RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
P66810/116-185              RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
U5WMC8/382-451              RGFEELVEVTTMIAQLTADQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTERDELTG
W4I5E5/355-424              RGFEELVEVTTMIAQLTADQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADTERDEQTG
A0A0T9XWR1/80-149           RGFEDLVEVTTMIADLTTDQREALLLTQLLGLSYADAAAVCGCPVGTIRSRVARARDALLADAEPDDLTG
#=GC scorecons              7999799999899959958999999999999989799999999999999999999998999858597799
#=GC scorecons_70           **************_**_********************************************_*_*****
#=GC scorecons_80           **************_**_********************************************_*_*_***
#=GC scorecons_90           _***_*****_***_**_****************_***************************___*__**
//