# STOCKHOLM 1.0
#=GF ID 4.10.280.10/FF/4472
#=GF DE Putative HLH DNA-binding domain superfamily protein isoform 1
#=GF AC 4.10.280.10/FF/4472
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 17.579
#=GS Q75KP4/263-311      AC Q75KP4
#=GS Q75KP4/263-311      OS Oryza sativa Japonica Group
#=GS Q75KP4/263-311      DE Expressed protein
#=GS Q75KP4/263-311      DR GENE3D; 1ef148e8c39a9edd93fbe5c3cbe0fdaa/263-311; 
#=GS Q75KP4/263-311      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q75KP4/263-311      DR GO; GO:0005634; 
#=GS A0A0P0VZ61/287-335  AC A0A0P0VZ61
#=GS A0A0P0VZ61/287-335  OS Oryza sativa Japonica Group
#=GS A0A0P0VZ61/287-335  DE Os03g0391700 protein
#=GS A0A0P0VZ61/287-335  DR GENE3D; 6e48519a532a9a51f9eca0814c73dc4d/287-335; 
#=GS A0A0P0VZ61/287-335  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A0D9Z8E0/357-405  AC A0A0D9Z8E0
#=GS A0A0D9Z8E0/357-405  OS Oryza glumipatula
#=GS A0A0D9Z8E0/357-405  DE Uncharacterized protein
#=GS A0A0D9Z8E0/357-405  DR GENE3D; 13cee0d567abd23d9292b3287951094d/357-405; 
#=GS A0A0D9Z8E0/357-405  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS A0A0E0D1L1/307-355  AC A0A0E0D1L1
#=GS A0A0E0D1L1/307-355  OS Oryza meridionalis
#=GS A0A0E0D1L1/307-355  DE Uncharacterized protein
#=GS A0A0E0D1L1/307-355  DR GENE3D; 163167825bd89f79c1cd0cc426094620/307-355; 
#=GS A0A0E0D1L1/307-355  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS B8AQM7/362-410      AC B8AQM7
#=GS B8AQM7/362-410      OS Oryza sativa Indica Group
#=GS B8AQM7/362-410      DE Putative uncharacterized protein
#=GS B8AQM7/362-410      DR GENE3D; 1c88aef9fd0d158ba494611255973a32/362-410; 
#=GS B8AQM7/362-410      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS I1PBY1/263-311      AC I1PBY1
#=GS I1PBY1/263-311      OS Oryza glaberrima
#=GS I1PBY1/263-311      DE Uncharacterized protein
#=GS I1PBY1/263-311      DR GENE3D; 1ef148e8c39a9edd93fbe5c3cbe0fdaa/263-311; 
#=GS I1PBY1/263-311      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GS K4AKB6/261-309      AC K4AKB6
#=GS K4AKB6/261-309      OS Setaria italica
#=GS K4AKB6/261-309      DE Uncharacterized protein
#=GS K4AKB6/261-309      DR GENE3D; 433b6fcc5c8e5359288352195801593c/261-309; 
#=GS K4AKB6/261-309      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Cenchrinae; Setaria; Setaria italica; 
#=GS C5WXP2/262-310      AC C5WXP2
#=GS C5WXP2/262-310      OS Sorghum bicolor
#=GS C5WXP2/262-310      DE Uncharacterized protein
#=GS C5WXP2/262-310      DR GENE3D; 4d4f661791df22dadec4d7914ca7ff21/262-310; 
#=GS C5WXP2/262-310      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor; 
#=GS J3LPF2/262-310      AC J3LPF2
#=GS J3LPF2/262-310      OS Oryza brachyantha
#=GS J3LPF2/262-310      DE Uncharacterized protein
#=GS J3LPF2/262-310      DR GENE3D; 5f58e01e054071e5b5d0844c5c1da97c/262-310; 
#=GS J3LPF2/262-310      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza brachyantha; 
#=GS A0A0D9Z8E1/474-522  AC A0A0D9Z8E1
#=GS A0A0D9Z8E1/474-522  OS Oryza glumipatula
#=GS A0A0D9Z8E1/474-522  DE Uncharacterized protein
#=GS A0A0D9Z8E1/474-522  DR GENE3D; 7337e438b09148d3ea7a2efc0ddf9937/474-522; 
#=GS A0A0D9Z8E1/474-522  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS A0A0E0KEK7/306-354  AC A0A0E0KEK7
#=GS A0A0E0KEK7/306-354  OS Oryza punctata
#=GS A0A0E0KEK7/306-354  DE Uncharacterized protein
#=GS A0A0E0KEK7/306-354  DR GENE3D; 775a59b17251837762f92d9b27e7e292/306-354; 
#=GS A0A0E0KEK7/306-354  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; 
#=GS A0A0D9Z8E2/408-456  AC A0A0D9Z8E2
#=GS A0A0D9Z8E2/408-456  OS Oryza glumipatula
#=GS A0A0D9Z8E2/408-456  DE Uncharacterized protein
#=GS A0A0D9Z8E2/408-456  DR GENE3D; 856c6ba5caa3c706ca8e782ac4e4d736/408-456; 
#=GS A0A0D9Z8E2/408-456  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; 
#=GS A0A0D9VUU2/306-354  AC A0A0D9VUU2
#=GS A0A0D9VUU2/306-354  OS Leersia perrieri
#=GS A0A0D9VUU2/306-354  DE Uncharacterized protein
#=GS A0A0D9VUU2/306-354  DR GENE3D; 9b5392296783f1f1eccf4ee3ca9e6538/306-354; 
#=GS A0A0D9VUU2/306-354  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; 
#=GS A0A1D6P7U8/337-385  AC A0A1D6P7U8
#=GS A0A1D6P7U8/337-385  OS Zea mays
#=GS A0A1D6P7U8/337-385  DE Uncharacterized protein
#=GS A0A1D6P7U8/337-385  DR GENE3D; 9b88ddcadde1039278145c8a2698c92a/337-385; 
#=GS A0A1D6P7U8/337-385  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GS A0A0E0GNL4/372-420  AC A0A0E0GNL4
#=GS A0A0E0GNL4/372-420  OS Oryza nivara
#=GS A0A0E0GNL4/372-420  DE Uncharacterized protein
#=GS A0A0E0GNL4/372-420  DR GENE3D; a33727070ee7309a0de7497e829ca330/372-420; 
#=GS A0A0E0GNL4/372-420  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza nivara; 
#=GS A0A0D3FJD1/372-420  AC A0A0D3FJD1
#=GS A0A0D3FJD1/372-420  OS Oryza barthii
#=GS A0A0D3FJD1/372-420  DE Uncharacterized protein
#=GS A0A0D3FJD1/372-420  DR GENE3D; a33727070ee7309a0de7497e829ca330/372-420; 
#=GS A0A0D3FJD1/372-420  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; 
#=GS A0A0E0NW23/372-420  AC A0A0E0NW23
#=GS A0A0E0NW23/372-420  OS Oryza rufipogon
#=GS A0A0E0NW23/372-420  DE Uncharacterized protein
#=GS A0A0E0NW23/372-420  DR GENE3D; a33727070ee7309a0de7497e829ca330/372-420; 
#=GS A0A0E0NW23/372-420  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A0E0KEK8/333-381  AC A0A0E0KEK8
#=GS A0A0E0KEK8/333-381  OS Oryza punctata
#=GS A0A0E0KEK8/333-381  DE Uncharacterized protein
#=GS A0A0E0KEK8/333-381  DR GENE3D; b980a2d6055d1a9497f949be0214fb17/333-381; 
#=GS A0A0E0KEK8/333-381  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; 
#=GS A0A0A9D6Y6/271-319  AC A0A0A9D6Y6
#=GS A0A0A9D6Y6/271-319  OS Arundo donax
#=GS A0A0A9D6Y6/271-319  DE Uncharacterized protein
#=GS A0A0A9D6Y6/271-319  DR GENE3D; bd9f3301965089775a2f66538148e14c/271-319; 
#=GS A0A0A9D6Y6/271-319  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Arundinoideae; Arundineae; Arundo; Arundo donax; 
#=GS A0A0E0GNL3/321-369  AC A0A0E0GNL3
#=GS A0A0E0GNL3/321-369  OS Oryza nivara
#=GS A0A0E0GNL3/321-369  DE Uncharacterized protein
#=GS A0A0E0GNL3/321-369  DR GENE3D; f517a488a95414ac3dd5a4bfebfc365e/321-369; 
#=GS A0A0E0GNL3/321-369  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza nivara; 
#=GS K7VCX1/263-315      AC K7VCX1
#=GS K7VCX1/263-315      OS Zea mays
#=GS K7VCX1/263-315      DE Putative HLH DNA-binding domain superfamily protein isoform 1
#=GS K7VCX1/263-315      DR GENE3D; 0faa681ec1dd075c71190013d5be5f51/263-315; 
#=GS K7VCX1/263-315      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; 
#=GF TC 123.4 2.1E-39
#=GF SQ 21
Q75KP4/263-311              -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0P0VZ61/287-335          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0D9Z8E0/357-405          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0E0D1L1/307-355          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
B8AQM7/362-410              -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
I1PBY1/263-311              -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
K4AKB6/261-309              -QNRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLQYLKLKVKTLG---
C5WXP2/262-310              -QKRRRERIQETVAALRNIVPGGIAKDATAVLDEAICYLQYLKLKVKTLG---
J3LPF2/262-310              -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0D9Z8E1/474-522          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0E0KEK7/306-354          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0D9Z8E2/408-456          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0D9VUU2/306-354          -RERRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A1D6P7U8/337-385          -QRRRRERIQETVAALRNIVPGGTAKDATAVLDEAICYLQYLKLKVKTLG---
A0A0E0GNL4/372-420          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0D3FJD1/372-420          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0E0NW23/372-420          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0E0KEK8/333-381          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
A0A0A9D6Y6/271-319          -QERRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLQYLKLKVKTLG---
A0A0E0GNL3/321-369          -RKRRRERIQETVAALRKIVPGGIAKDATAVLDEAICYLKYLKLKVKTLG---
K7VCX1/263-315              DQRRRRERIQETVAALRNIVPGGTAKDATAVLDEAICYLQYLKLKVKTLGAAS
#=GC scorecons              06599999999999999699999699999999999999969999999999000
#=GC scorecons_70           _*_**************_********************************___
#=GC scorecons_80           ___**************_*****_***************_**********___
#=GC scorecons_90           ___**************_*****_***************_**********___
//