# STOCKHOLM 1.0 #=GF ID 3.40.50.300/FF/634789 #=GF DE DNA repair protein RAD51-like 4 #=GF AC 3.40.50.300/FF/634789 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 74.901 #=GS Q9LQQ2/90-317 AC Q9LQQ2 #=GS Q9LQQ2/90-317 OS Arabidopsis thaliana #=GS Q9LQQ2/90-317 DE DNA repair protein RAD51 homolog 4 #=GS Q9LQQ2/90-317 DR GENE3D; c7887439e05dcb5a9669ffa7689eb380/90-317; #=GS Q9LQQ2/90-317 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9LQQ2/90-317 DR GO; GO:0006281; GO:0016444; GO:1900426; #=GS A3QS62/90-317 AC A3QS62 #=GS A3QS62/90-317 OS Arabidopsis thaliana #=GS A3QS62/90-317 DE RAD51D splice variant a #=GS A3QS62/90-317 DR GENE3D; c7887439e05dcb5a9669ffa7689eb380/90-317; #=GS A3QS62/90-317 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A8MSF8/72-299 AC A8MSF8 #=GS A8MSF8/72-299 OS Arabidopsis thaliana #=GS A8MSF8/72-299 DE DNA repair protein RAD51-like 4 #=GS A8MSF8/72-299 DR GENE3D; f0da5855648625c663cb7603f7e83754/72-299; #=GS A8MSF8/72-299 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A3QS64/90-230 AC A3QS64 #=GS A3QS64/90-230 OS Arabidopsis thaliana #=GS A3QS64/90-230 DE RAD51D splice variant b #=GS A3QS64/90-230 DR GENE3D; 8666d8196ef4fa118543a7ce93d101fa/90-230; #=GS A3QS64/90-230 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q1ZXF0/84-348 AC Q1ZXF0 #=GS Q1ZXF0/84-348 OS Dictyostelium discoideum #=GS Q1ZXF0/84-348 DE Probable DNA repair protein RAD51 homolog 4 #=GS Q1ZXF0/84-348 DR GENE3D; fb047c7477310e28b00bd6df2809d356/84-348; #=GS Q1ZXF0/84-348 DR ORG; Eukaryota; Dictyosteliida; Dictyostelium; Dictyostelium discoideum; #=GS Q1ZXF0/84-348 DR GO; GO:0003677; GO:0005634; GO:0006281; #=GS W9SC46/74-308 AC W9SC46 #=GS W9SC46/74-308 OS Morus notabilis #=GS W9SC46/74-308 DE DNA repair protein RAD51-4-like protein #=GS W9SC46/74-308 DR GENE3D; 50c4b972165bc86b1f95509af118c6e5/74-308; #=GS W9SC46/74-308 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Rosales; Moraceae; Morus; Morus notabilis; #=GS R0GRC4/53-302 AC R0GRC4 #=GS R0GRC4/53-302 OS Capsella rubella #=GS R0GRC4/53-302 DE Uncharacterized protein #=GS R0GRC4/53-302 DR GENE3D; 55288cc7e69508b6ddba94a2e6f27402/53-302; #=GS R0GRC4/53-302 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A067L6U7/72-318 AC A0A067L6U7 #=GS A0A067L6U7/72-318 OS Jatropha curcas #=GS A0A067L6U7/72-318 DE Uncharacterized protein #=GS A0A067L6U7/72-318 DR GENE3D; 87de270d5a70bd70d5a50bc55a0ee4e0/72-318; #=GS A0A067L6U7/72-318 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha; Jatropha curcas; #=GS A0A078JMK1/72-317 AC A0A078JMK1 #=GS A0A078JMK1/72-317 OS Brassica napus #=GS A0A078JMK1/72-317 DE BnaCnng55870D protein #=GS A0A078JMK1/72-317 DR GENE3D; da72c60ec1f4619758d2b1d222f9b281/72-317; #=GS A0A078JMK1/72-317 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A087GRD7/73-318 AC A0A087GRD7 #=GS A0A087GRD7/73-318 OS Arabis alpina #=GS A0A087GRD7/73-318 DE Uncharacterized protein #=GS A0A087GRD7/73-318 DR GENE3D; fd073edb40604ff1021eff68559b3ea1/73-318; #=GS A0A087GRD7/73-318 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS B9SYN5/74-315 AC B9SYN5 #=GS B9SYN5/74-315 OS Ricinus communis #=GS B9SYN5/74-315 DE DNA repair and recombination protein radB, putative #=GS B9SYN5/74-315 DR GENE3D; 1aa7bed7445d015c7753d02051d3f2e1/74-315; #=GS B9SYN5/74-315 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus; Ricinus communis; #=GS A0A1J3DWM3/72-321 AC A0A1J3DWM3 #=GS A0A1J3DWM3/72-321 OS Noccaea caerulescens #=GS A0A1J3DWM3/72-321 DE DNA repair protein RAD51-like protein 4 #=GS A0A1J3DWM3/72-321 DR GENE3D; cf3225e0f4659e38fc13ba4c0e1f07fc/72-321; #=GS A0A1J3DWM3/72-321 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS A0A078FRW7/73-323 AC A0A078FRW7 #=GS A0A078FRW7/73-323 OS Brassica napus #=GS A0A078FRW7/73-323 DE BnaA08g29130D protein #=GS A0A078FRW7/73-323 DR GENE3D; a16cf16c311dd6fab688057681b6ea07/73-323; #=GS A0A078FRW7/73-323 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS V4MVE5/73-314 AC V4MVE5 #=GS V4MVE5/73-314 OS Eutrema salsugineum #=GS V4MVE5/73-314 DE Uncharacterized protein #=GS V4MVE5/73-314 DR GENE3D; cb685fe58d51ecf9d37613f5a4cdb3fe/73-314; #=GS V4MVE5/73-314 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GF TC 252.4 2.3E-78 #=GF SQ 14 Q9LQQ2/90-317 ------------------STGDKETDSLLQG-GFREGQLTELVGPSSSGKTQFCMQAAASVAENHLGRVLYLDTGNSFSARRIAQFICSS-----------------------SD-ATLG----QKVMSRILCHTVYDIYTLFDTLQDLEITLR-----LQMNVNE--SRLRLLVVDSISSLITPILGGSGSQ------------------GRALMVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGGKTKPALGETWKSIPHVRLSLSR---DHKNSNCTISILKHTSLP----SGQAAKTLTRKE---- A3QS62/90-317 ------------------STGDKETDSLLQG-GFREGQLTELVGPSSSGKTQFCMQAAASVAENHLGRVLYLDTGNSFSARRIAQFICSS-----------------------SD-ATLG----QKVMSRILCHTVYDIYTLFDTLQDLEITLR-----LQMNVNE--SRLRLLVVDSISSLITPILGGSGSQ------------------GRALMVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGGKTKPALGETWKSIPHVRLSLSR---DHKNSNCTISILKHTSLP----SGQAAKTLTRKE---- A8MSF8/72-299 ------------------STGDKETDSLLQG-GFREGQLTELVGPSSSGKTQFCMQAAASVAENHLGRVLYLDTGNSFSARRIAQFICSS-----------------------SD-ATLG----QKVMSRILCHTVYDIYTLFDTLQDLEITLR-----LQMNVNE--SRLRLLVVDSISSLITPILGGSGSQ------------------GRALMVAIGYLLKKLAHEHSIAILVTNHTVGAGGEGGKTKPALGETWKSIPHVRLSLSR---DHKNSNCTISILKHTSLP----SGQAAKTLTRKE---- A3QS64/90-230 ------------------STGDKETDSLLQG-GFREGQLTELVGPSSSGKTQFCMQAAASVAENHLGRVLYLDTGNSFSARRIAQFICSS-----------------------SD-ATLG----QKVMSRILCHTVYDIYTLFDTLQDLEITLR-----LQMNVNE--SRLRLLVVDSISSLITPILGGSGSQ------------------GT-------------------------------------------------------------------------------------------------- Q1ZXF0/84-348 ------------EFKTHYSSGIKLLDQLLGGNGFTSGEIYELVGNTSCGKTQISMCCSLNLSQQYNSNIIYIDSSNSFSPPRLIEIFKSNYLIKQRQKQQQKQQQKQHQKQQENN-DKIEQDKILKILDRIKVFNCFDSITLLELLSTIDSTLSIISDEIPTFENQFYKGLKMVVIDSIGTLLAPIIGGKQTQ------------------GHYTMMMISRLIKYIADTYQIIFLITNNTVG--GNSFDNKAALGEAWSMVPNHQLMINHQYNDDENEERSIYIEKSTRLPV------SIIFII------- W9SC46/74-308 -MNGMDLLADSLQNKHVLSTGCEGIDLLLGG-GLREGQLTELVGPSSSGKTQVCLQAASNVAEKHMGRVVYLDTSNSFSPQRIADFVDLA-----------------------TH-NFL-----QNVMKNILCHSVFDIFTMFDILHQLELDLR---SQ----NGP--RRVRLLIVDSISSLITPILGGSGLQ------------------GHSLMVSAGCLLKKLAHQHNLVVLVTNHTVG--GEGGAPKPALGEYWKSIPHVRLMLSR---DRGNNTCSISILKHSSMVYLGSSGE------------- R0GRC4/53-302 WLNGMELLEDLQRNKQTLSSGDKGVDSLLKG-GFREGQLTELVGPSSSGKTQFCMQAAASVAEKHAGRVLYLDTGNSFSARRIAQF-GSS-----------------------SE-TSLG----QKVISRISCHTVYDIYTMLEILQGLDVTLR---SQVQTNVNE--QRLRLLVVDSISSLITPILGGSGSQ------------------GRALMVAVGYMLKKLAHEHSIAILVTNHTVGAGGEGVKTKPALGETWKSIPHVRLMLSR---DHKNSNCTISILKHTSMP----SGQTVRTTIRKDNQQ- A0A067L6U7/72-318 WSNGLQLLEDALQNKHVLSTGFEGIDALLGG-GVREGQLTELVGPSSSGKTQVCLQVAANVAIQHTGSVIFMDTGNSFSPQRIEHFVHRI-----------------------SG-SAFNENFVQKVMSNILCHSVFDIFSMFDVLRQVEIGLK---SQ--QCKGD--CKVRSIIVDSISSLITPVLGGSGSQ------------------GHALMTSAGFLLKKLAHEHNIAVLVTNHMVT--GEGGNPKPALGESWKSIPHVRLLLSC---DHRNNACKISILKHTSLA----SGETARFVV--DG--- A0A078JMK1/72-317 WLNGMELLEDLQRNKHTLSSGDNGMNSLLQG-GYGEGQLTELVGPSSSGKTQFCMRAAASVAEKQEGSVFYIDTGNSFSARRIAQFICGG-----------------------SDAAALR----KRVLSRISCHTVYDIYTMFDTLQGLEVALR---SQVQMNVNE--YRLRLLVVDSISSTITPILGGSGSQ------------------GRALMVALGYMLKKLAHEHNIAVLVTNHTVGA-GESGKTKPALGETWKSIPHVRLMLSR---DNRNSNCTISILKHTSMP----SGQTVRTITR------ A0A087GRD7/73-318 -LNGMELLEDLQCNKHTLSTGDKGADSLLQN-GLREGQLTELVGPSSSGKTQFCMQAAASVAEKHVGGVLYIDTGNSFSARRIAQYICSS-----------------------SD-AALV----QKVMSRISCHTVFDIYTMFDTLQCLEVTLK---SQGQMNVNE--YRLRLLVVDSISSLITPILGGSGSQ------------------GRALMVAIGYLLKKLAHEHNIAILVTNHTVAA-GEDGKTKPALGETWKSIPHVRLMLSR---EHNNNNCTISILKHTSMP----SGQTVKTMTLKD---- B9SYN5/74-315 -LNGFQLLKDALQNKHVLSTGFDGIDSLLGG-GVREGQLTELVGSSSSGKTQVCLQVAANVAKQHMGRVIFVDTGNSFSPRRIEQFVGRI-----------------------SG-SALN----QTVMSNILCHSVFDIFSMFDVLHQLEISLR---SQ--GHSGD--FKVQSLIVDSISSLITPILGGGGSQ------------------GHALMTSAGILLKKLAHEHNIAVLVTNHMVA--GEGGNFKPALGESWKSIPHVRLLLSR---DQGKNVCNVTILKHPSQA----SGKAARFTV--DD--- A0A1J3DWM3/72-321 WSNGMELLEDLHGNKHTLSTGDKGTDSLLQG-GFREGQLIELVGPSSSGKTQFCMQAAASVAEKHNGRVLYLDTGNSFSARRIAQFICLG-----------------------SD-AALR----QKVLSRISCQMVYDIYTMFDMLHGLEATLR---SQAQMNVNE--NRLQLLVVDSISSLITPILGGSGSQ------------------GRALMVAVGYMLKKLAHEHNIAILVTNHTVGA-GEGGKIKPALGETWKSIPHVRLMLTR---DHRNNNCTISILKHTSMP----SGQTVTTMTRKDNTH- A0A078FRW7/73-323 -LNGMELLEDLQRNKHTLSSGDNGADSLLQG-GLREGQLTELVGPSSSGKTQFCMQASASVAEKQDGRVFYIDTGNSFCARRIAQFICGS-----------------------SDAAALR----KRVLSRISCHTVYDIYTMFDTLQGLEVALR---SQVQMNVNE--YRLRLLVVDSISSLITPILGGSGSQ------------------GRALMVALGYLLKKLAHEHNIAVLVTNHTVGA-GESGKTKPALGETWKSIPHVRLMLSR---DHRNSNCTISILKHTSMP----SGKTVRTITRKDNQQC V4MVE5/73-314 -LNGMEILEDLHRNKHTLSTGDNGMDSLLQG-GFREGQLTELVGPSSSGKTQICMQAAASVAEKQTGRVFYVDTGNSFSARRIAQFICAT-----------------------SD-AALG----KKVLSRISCHTVYDIFTMFDTLQGLEVTLR---SQVQMNVNE--YRLRLLVVDSISSLITPILGGSGSQDELVIWKKDSRVTNLVFAGRALMVAVGYMLKKLAHEHNIAILVTNHTVGA-GEGGKTKPALGETWKSIPH---------------------------P----SGLTGRTLTRKDNQ-- #=GC scorecons 01222222121123432396945448599580956797769999679799995776676677656375858597799986697567544400000000000000000000000650547300005686669477577976767749537755960003324444650036776778999778779879967690000000000000000009545644353556556546465466665565206544436566664655665445344400053253343535454443400005523333331120000 #=GC scorecons_70 __________________***____*_**_*_*_******************_***_**_**__*_*_*_*_*******__**_**___________________________*____*______******_**_****_****_*__**__**__________*____***_********************__________________*___*_______*__*_______*_**__*___*_____*_****_*___*_________________________________________________ #=GC scorecons_80 __________________*_*____*_**_*_*__****_****_*******_**__*__**____*_*_*_**_****__**__*________________________________________*___*_*__****_*_**_*__**__*____________________****************_*_*__________________*___________________________________________________________________________________________________ #=GC scorecons_90 __________________*_*____*_**_*_*___*___****__*_****________________*_*_*__****__*____________________________________________*___*______*_______*______*______________________****__*__**_**___*__________________*___________________________________________________________________________________________________ //