# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/634460
#=GF DE DNA repair protein RecN
#=GF AC 3.40.50.300/FF/634460
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 66.274
#=GS Q9ZDY2/2-189      AC Q9ZDY2
#=GS Q9ZDY2/2-189      OS Rickettsia prowazekii str. Madrid E
#=GS Q9ZDY2/2-189      DE DNA repair protein RecN
#=GS Q9ZDY2/2-189      DR GENE3D; fc93c177b5ff1cde626dba52eee3f5d2/2-189; 
#=GS Q9ZDY2/2-189      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; typhus group; Rickettsia prowazekii; 
#=GS L8ATE3/1-268      AC L8ATE3
#=GS L8ATE3/1-268      OS Bacillus subtilis BEST7613
#=GS L8ATE3/1-268      DE DNA repair protein RecN
#=GS L8ATE3/1-268      DR GENE3D; f08ca07d281c1def09a15ec752e30dfc/1-268; 
#=GS L8ATE3/1-268      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS P74374/1-268      AC P74374
#=GS P74374/1-268      OS Synechocystis sp. PCC 6803 substr. Kazusa
#=GS P74374/1-268      DE DNA repair protein RecN
#=GS P74374/1-268      DR GENE3D; f08ca07d281c1def09a15ec752e30dfc/1-268; 
#=GS P74374/1-268      DR ORG; Bacteria; Cyanobacteria; Synechococcales; Merismopediaceae; Synechocystis; Synechocystis sp. PCC 6803; 
#=GS D5AWA3/2-189      AC D5AWA3
#=GS D5AWA3/2-189      OS Rickettsia prowazekii str. Rp22
#=GS D5AWA3/2-189      DE DNA repair protein RecN
#=GS D5AWA3/2-189      DR GENE3D; fc93c177b5ff1cde626dba52eee3f5d2/2-189; 
#=GS D5AWA3/2-189      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; typhus group; Rickettsia prowazekii; 
#=GS Q92J40/2-214      AC Q92J40
#=GS Q92J40/2-214      OS Rickettsia conorii str. Malish 7
#=GS Q92J40/2-214      DE DNA repair protein RecN
#=GS Q92J40/2-214      DR GENE3D; 0ff8f422bc2e995a2fa0e61514810771/2-214; 
#=GS Q92J40/2-214      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia conorii; 
#=GS A0A0F3QZ54/3-251  AC A0A0F3QZ54
#=GS A0A0F3QZ54/3-251  OS Rickettsia amblyommatis str. Darkwater
#=GS A0A0F3QZ54/3-251  DE DNA repair protein RecN
#=GS A0A0F3QZ54/3-251  DR GENE3D; 87018fdbec943e8b0e11ef16d7de94ae/3-251; 
#=GS A0A0F3QZ54/3-251  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia amblyommatis; 
#=GS H8K4C0/3-251      AC H8K4C0
#=GS H8K4C0/3-251      OS Rickettsia amblyommatis str. GAT-30V
#=GS H8K4C0/3-251      DE DNA repair protein RecN
#=GS H8K4C0/3-251      DR GENE3D; 87018fdbec943e8b0e11ef16d7de94ae/3-251; 
#=GS H8K4C0/3-251      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group; Rickettsia amblyommatis; 
#=GS A8EXP9/1-255      AC A8EXP9
#=GS A8EXP9/1-255      OS Rickettsia canadensis str. McKiel
#=GS A8EXP9/1-255      DE DNA repair protein RecN
#=GS A8EXP9/1-255      DR GENE3D; a8a35376a477778c895dea73dc565c29/1-255; 
#=GS A8EXP9/1-255      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group; Rickettsia canadensis; 
#=GS Q1RHI2/2-250      AC Q1RHI2
#=GS Q1RHI2/2-250      OS Rickettsia bellii RML369-C
#=GS Q1RHI2/2-250      DE DNA repair protein RecN
#=GS Q1RHI2/2-250      DR GENE3D; ae171a4316910d3c479e256583b38238/2-250; 
#=GS Q1RHI2/2-250      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group; Rickettsia bellii; 
#=GS A0A0F3Q9K0/2-250  AC A0A0F3Q9K0
#=GS A0A0F3Q9K0/2-250  OS Rickettsia bellii str. RML An4
#=GS A0A0F3Q9K0/2-250  DE DNA repair protein RecN
#=GS A0A0F3Q9K0/2-250  DR GENE3D; ae171a4316910d3c479e256583b38238/2-250; 
#=GS A0A0F3Q9K0/2-250  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; belli group; Rickettsia bellii; 
#=GF TC 365.6 2.7E-113
#=GF SQ 10
Q9ZDY2/2-189              -FYSLSVKNFILIDELEIEFSKGLCVITGETGAGKSILLDAILFCLGYKTSN-NIIKHGKDYTVVNIIFSLNEKIKKFLIQNFIEPEELLLVKCLQKAEGRKSFF-----INNQIVTKTLIKQLANYLFELHGQNNNITLLEASTQRDILDSYG--DLLEFRVKLAKCYQIWQNTRKEIEEITVKQNVIEQEIDYLN--------------------------------------------------------------------------
L8ATE3/1-268              MLLSLRINNFALIDCLEINFGQGLNVLTGETGAGKSILLDAIDLLLGGKAGA-RVLRQGCSSGVIEGIFSTSTELNDWLATQAIEPLEDNTIACTREFSKKGSSLNSRSRLNGVLVNRQILAELRSQLVEITAQGQTQQLLDPGQQRQLLDLFGGQNLLEKRQAVEITYKEFTQAKQALTARQQSEQNRLQRLDFLTYQLQELTEAELTDGDEWELLIQEQEKLSHVVELQQLSYQATQLLYQ--SERDTPAIADLLGDAEGQLQTMAEFD
P74374/1-268              MLLSLRINNFALIDCLEINFGQGLNVLTGETGAGKSILLDAIDLLLGGKAGA-RVLRQGCSSGVIEGIFSTSTELNDWLATQAIEPLEDNTIACTREFSKKGSSLNSRSRLNGVLVNRQILAELRSQLVEITAQGQTQQLLDPGQQRQLLDLFGGQNLLEKRQAVEITYKEFTQAKQALTARQQSEQNRLQRLDFLTYQLQELTEAELTDGDEWELLIQEQEKLSHVVELQQLSYQATQLLYQ--SERDTPAIADLLGDAEGQLQTMAEFD
D5AWA3/2-189              -FYSLSVKNFILIDELEIEFSKGLCVITGETGAGKSILLDAILFCLGYKTSN-NIIKHGKDYTVVNIIFSLNEKIKKFLIQNFIEPEELLLVKCLQKAEGRKSFF-----INNQIVTKTLIKQLANYLFELHGQNNNITLLEASTQRDILDSYG--DLLEFRVKLAKCYQIWQNTRKEIEEITVKQNVIEQEIDYLN--------------------------------------------------------------------------
Q92J40/2-214              -FYSLSVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSN-NIIKRGKDYAVVNIIFSLNEEIKNFLVQNFIEPEELLFVKCLQKAEGRKNFF-----INNQVVTKALMQQLATYLFELHGQNNNISLLEANTQRDILDSYG--NLLDFRAELSKCYQAWQNTRKEMAEITLKQNSIEQEIDYLSFATEELTKLNIQTG--------EEEKLANLRKD-----------------------------------------
A0A0F3QZ54/3-251          --CSLSVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSN-NIIKHGKDYAVVNIIFSLNEEIKNFLIQNFIEPEELLFVKCLQKAEGRKNFF-----INNQVVTKALMQQLATYLFELHGQNNNISLLEANTQRDILDSYG--NLLDFRAELSKCYQTWQNTRKEMAEITLKQNSIEQEIDYLSFATEELTKLNIQTG--------EEEKLANLRKDLQNKDKDLQLIKDILEQINNPEINTSINRAEKLLARQ----
H8K4C0/3-251              --CSLSVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKTSN-NIIKHGKDYAVVNIIFSLNEEIKNFLIQNFIEPEELLFVKCLQKAEGRKNFF-----INNQVVTKALMQQLATYLFELHGQNNNISLLEANTQRDILDSYG--NLLDFRAELSKCYQTWQNTRKEMAEITLKQNSIEQEIDYLSFATEELTKLNIQTG--------EEEKLANLRKDLQNKDKDLQLIKDILEQINNPEINTSINRAEKLLARQ----
A8EXP9/1-255              MLQSLLVKNFILIDELEIEFNKGLCVITGETGAGKSILLDAILFCLGYKISN-NIIKRGKDYAVVSIIYSLNEEIKNFLLQNFIEPEELLLVKCLHKTEGRKKFF-----INNQVVNKTLMQQLATYLFELHGQNHNISLLEANTQRDILDSYG--NILDFRAELSKCYQIWKDTQKEIAEITLKQNSIEQEIDYLSFATEELTKLNIQIG--------EEEKLANIRKDLQNKDKELQLIKDTLEQINNPEINISINRAEKLLARQGQNK
Q1RHI2/2-250              -FHSLSVKNFILIDELEIEFTNGLCVITGETGAGKSILLDAILFCLGYKTSSAGIIKHGKDYAAVNIVFSLNDEIKNFLTQNFIELEESLLIKCVQKAEGRKNFF-----INNQVVNKAIMQQLATYLFELHGQNNNISLLEINTQRDILDSFG--DLLELRMQLAKCYQAWQNIRNEIAEIALKQNSIEQEIDYLNFVTEELIKLNVQTG--------EEEQLTNIRKDLQNKDKDLQLIKDIFEQVNNPEINSSISKAEKLLA------
A0A0F3Q9K0/2-250          -FHSLSVKNFILIDELEIEFTNGLCVITGETGAGKSILLDAILFCLGYKTSSAGIIKHGKDYAAVNIVFSLNDEIKNFLTQNFIELEESLLIKCVQKAEGRKNFF-----INNQVVNKAIMQQLATYLFELHGQNNNISLLEINTQRDILDSFG--DLLELRMQLAKCYQAWQNIRNEIAEIALKQNSIEQEIDYLNFVTEELIKLNVQTG--------EEEQLTNIRKDLQNKDKDLQLIKDIFEQVNNPEINSSISKAEKLLA------
#=GC scorecons            0439947699699959996945995969999999999999995659959665047675956557755789565666559456599759354659566455755560000069655967465469555969656965654997545996699579006897393464559635555655545544566455966979442335543333325000000005354533323224222222442220022122424212222442242110000
#=GC scorecons_70         ___**_****_***_*****__**_*****************_*_**_*_*___***_*____**__***_*_***__*____***_*___*_*__*___*___*_____**___*_*_*__**___*_**_**__*__***___**_***_**__****_*__*___**_____*_________*____*_****___________________________________________________________________________
#=GC scorecons_80         ___**_*_**_***_***_*__**_*_***************___**_*_____*_*_*____**__***________*____**__*_____*______*__________*___*_*_____*___*_*___*_____***___**__**_**___***_*______*_____________________*__***___________________________________________________________________________
#=GC scorecons_90         ___**___**_***_***_*__**_*_***************___**_*_________*_________**________*____**__*_____*_________________*___*_______*___*_*___*_____**____**__**__*___**__*______*_____________________*__*_*___________________________________________________________________________
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