# STOCKHOLM 1.0 #=GF ID 3.40.50.300/FF/629457 #=GF DE Putative ribosome biogenesis GTPase RsgA #=GF AC 3.40.50.300/FF/629457 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 46.693 #=GS Q88WF3/89-258 AC Q88WF3 #=GS Q88WF3/89-258 OS Lactobacillus plantarum WCFS1 #=GS Q88WF3/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA 2 #=GS Q88WF3/89-258 DR GENE3D; e38cabdeb21ac3c59efb769ade4851b3/89-258; #=GS Q88WF3/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS F6IS53/89-259 AC F6IS53 #=GS F6IS53/89-259 OS Lactobacillus pentosus MP-10 #=GS F6IS53/89-259 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS F6IS53/89-259 DR GENE3D; 02f83db1cef293bf89aadf500593b256/89-259; #=GS F6IS53/89-259 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus pentosus; #=GS G0LZT1/89-259 AC G0LZT1 #=GS G0LZT1/89-259 OS Lactobacillus pentosus IG1 #=GS G0LZT1/89-259 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS G0LZT1/89-259 DR GENE3D; 2177a083fff331a20fe8bb9644981185/89-259; #=GS G0LZT1/89-259 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus pentosus; #=GS Q8PTZ6/99-269 AC Q8PTZ6 #=GS Q8PTZ6/99-269 OS Methanosarcina mazei Go1 #=GS Q8PTZ6/99-269 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS Q8PTZ6/99-269 DR GENE3D; 3b89e58a8bfc574ac600f20d92cf02bd/99-269; #=GS Q8PTZ6/99-269 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; #=GS U2WL02/89-259 AC U2WL02 #=GS U2WL02/89-259 OS Lactobacillus plantarum AY01 #=GS U2WL02/89-259 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS U2WL02/89-259 DR GENE3D; 5eac415f9bb1bbb675c24a393478e250/89-259; #=GS U2WL02/89-259 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A0R1R9B9/89-259 AC A0A0R1R9B9 #=GS A0A0R1R9B9/89-259 OS Lactobacillus paraplantarum DSM 10667 #=GS A0A0R1R9B9/89-259 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A0R1R9B9/89-259 DR GENE3D; 5eac415f9bb1bbb675c24a393478e250/89-259; #=GS A0A0R1R9B9/89-259 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum; #=GS A0A0R1FWE8/112-282 AC A0A0R1FWE8 #=GS A0A0R1FWE8/112-282 OS Lactobacillus pentosus DSM 20314 #=GS A0A0R1FWE8/112-282 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A0R1FWE8/112-282 DR GENE3D; 65acc80b4f35463286425e00fbfefcb2/112-282; #=GS A0A0R1FWE8/112-282 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus pentosus; #=GS A0A199QG18/89-259 AC A0A199QG18 #=GS A0A199QG18/89-259 OS Lactobacillus plantarum #=GS A0A199QG18/89-259 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A199QG18/89-259 DR GENE3D; 7dd8538f93cfd5636fda7140dfbc3238/89-259; #=GS A0A199QG18/89-259 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A098R332/89-259 AC A0A098R332 #=GS A0A098R332/89-259 OS Lactobacillus paraplantarum #=GS A0A098R332/89-259 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A098R332/89-259 DR GENE3D; 7dd8538f93cfd5636fda7140dfbc3238/89-259; #=GS A0A098R332/89-259 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus paraplantarum; #=GS A0A0E3RD11/134-304 AC A0A0E3RD11 #=GS A0A0E3RD11/134-304 OS Methanosarcina mazei SarPi #=GS A0A0E3RD11/134-304 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A0E3RD11/134-304 DR GENE3D; 942b5ac1b490853f1206e3a1e5440fd4/134-304; #=GS A0A0E3RD11/134-304 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; #=GS A0A1J0CF98/89-258 AC A0A1J0CF98 #=GS A0A1J0CF98/89-258 OS Lactobacillus plantarum #=GS A0A1J0CF98/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A1J0CF98/89-258 DR GENE3D; 99ada939c7a3d5375b3ce5e3913e420b/89-258; #=GS A0A1J0CF98/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS R9X2B6/89-258 AC R9X2B6 #=GS R9X2B6/89-258 OS Lactobacillus plantarum 16 #=GS R9X2B6/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS R9X2B6/89-258 DR GENE3D; 99ada939c7a3d5375b3ce5e3913e420b/89-258; #=GS R9X2B6/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS T5JZ27/89-259 AC T5JZ27 #=GS T5JZ27/89-259 OS Lactobacillus plantarum EGD-AQ4 #=GS T5JZ27/89-259 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS T5JZ27/89-259 DR GENE3D; a212ff6230589bcee40ab6ad652c3395/89-259; #=GS T5JZ27/89-259 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A165NIP4/89-258 AC A0A165NIP4 #=GS A0A165NIP4/89-258 OS Lactobacillus plantarum #=GS A0A165NIP4/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A165NIP4/89-258 DR GENE3D; b818dd9b5335302c3cd783aedee6b695/89-258; #=GS A0A165NIP4/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS D7V988/89-258 AC D7V988 #=GS D7V988/89-258 OS Lactobacillus plantarum subsp. plantarum ATCC 14917 = JCM 1149 = CGMCC 1.2437 #=GS D7V988/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS D7V988/89-258 DR GENE3D; c60b0cc1518a40c8a000aeb855af910d/89-258; #=GS D7V988/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; Lactobacillus plantarum subsp. plantarum; #=GS M4KHR6/89-258 AC M4KHR6 #=GS M4KHR6/89-258 OS Lactobacillus plantarum ZJ316 #=GS M4KHR6/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS M4KHR6/89-258 DR GENE3D; c60b0cc1518a40c8a000aeb855af910d/89-258; #=GS M4KHR6/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A0P7GIK7/89-258 AC A0A0P7GIK7 #=GS A0A0P7GIK7/89-258 OS Lactobacillus plantarum WJL #=GS A0A0P7GIK7/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A0P7GIK7/89-258 DR GENE3D; c60b0cc1518a40c8a000aeb855af910d/89-258; #=GS A0A0P7GIK7/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A0G9FBD9/89-258 AC A0A0G9FBD9 #=GS A0A0G9FBD9/89-258 OS Lactobacillus plantarum #=GS A0A0G9FBD9/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A0G9FBD9/89-258 DR GENE3D; c60b0cc1518a40c8a000aeb855af910d/89-258; #=GS A0A0G9FBD9/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A0R1UW18/89-258 AC A0A0R1UW18 #=GS A0A0R1UW18/89-258 OS Lactobacillus plantarum subsp. argentoratensis DSM 16365 #=GS A0A0R1UW18/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A0R1UW18/89-258 DR GENE3D; 27bc2f7488f92065f81b3014f2134dc9/89-258; #=GS A0A0R1UW18/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; Lactobacillus plantarum subsp. argentoratensis; #=GS A0A165WGG6/89-258 AC A0A165WGG6 #=GS A0A165WGG6/89-258 OS Lactobacillus plantarum #=GS A0A165WGG6/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A165WGG6/89-258 DR GENE3D; 27bc2f7488f92065f81b3014f2134dc9/89-258; #=GS A0A165WGG6/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A151G7R8/89-258 AC A0A151G7R8 #=GS A0A151G7R8/89-258 OS Lactobacillus plantarum #=GS A0A151G7R8/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A151G7R8/89-258 DR GENE3D; 9dbf9a4189a55f22aa59d227927f2c1e/89-258; #=GS A0A151G7R8/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A162EAN9/89-258 AC A0A162EAN9 #=GS A0A162EAN9/89-258 OS Lactobacillus plantarum #=GS A0A162EAN9/89-258 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A162EAN9/89-258 DR GENE3D; a86e462f78fac83019095a11e1cb3ea5/89-258; #=GS A0A162EAN9/89-258 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus plantarum; #=GS A0A0E3LUI7/103-273 AC A0A0E3LUI7 #=GS A0A0E3LUI7/103-273 OS Methanosarcina mazei S-6 #=GS A0A0E3LUI7/103-273 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS A0A0E3LUI7/103-273 DR GENE3D; aff4716260b891071f3d1c2bc7afaa6a/103-273; #=GS A0A0E3LUI7/103-273 DR ORG; Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina; Methanosarcina mazei; #=GS I8R6B0/89-259 AC I8R6B0 #=GS I8R6B0/89-259 OS Lactobacillus pentosus KCA1 #=GS I8R6B0/89-259 DE Small ribosomal subunit biogenesis GTPase RsgA #=GS I8R6B0/89-259 DR GENE3D; b0f1f0581ac46179ad935e95d802f80e/89-259; #=GS I8R6B0/89-259 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus pentosus; #=GF TC 285.7 5.9E-89 #=GF SQ 24 Q88WF3/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLATKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDNKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- F6IS53/89-259 RQSVLARGAVNQHDG-QIIATNIDTIFICMSLNADFNVRRVERYLTIAWDSGAMPVLVLTKADVCTDRADKLRALADVTVGVPTVMCSAETGEGLEDLQPYLTAGQTVAFVGSSGVGKSTLINRLLGVTVLATKTIRQDDDKGRHTTTSRQLLPLPSGACVIDTPGMRELQI G0LZT1/89-259 RQSVLARGAVNQHDG-QIIATNIDTIFICMSLNADFNVRRVERYLTIAWDSGAMPVLVLTKADVCTDRADKLRALADVTVGVPTVMCSAETGEGLEDLQPYLTAGQTVAFVGSSGVGKSTLINRLLGATVLATKTIRQDDDKGRHTTTSRQLLPLPSGACVIDTPGMRELQI Q8PTZ6/99-269 -KTCLSRGAAGDGGGEQVIAANIDTIFIVTATGKDLNLRRLERYLAIVYSSGARPVILLNKIDLEDNPIRLVEKIQSIAGNVPVIPLSALSKTGLEALSPHLNPGETVALVGSSGVGKSTLINSLLGETVQRTGGIREDDEKGRHTTTVRQMFLLPNGAVLIDNPGIREIQL U2WL02/89-259 RQSVLARGAVNQHDG-QIIATNINTIFICMSLNADFNVRRVERYLTIAWDSGALPVIILTKADVCTDLAAKLRAVADVSVGVSTITCSAETGQGLDDLQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDVLTTKTIREDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQI A0A0R1R9B9/89-259 RQSVLARGAVNQHDG-QIIATNINTIFICMSLNADFNVRRVERYLTIAWDSGALPVIILTKADVCTDLAAKLRAVADVSVGVSTITCSAETGQGLDDLQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDVLTTKTIREDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQI A0A0R1FWE8/112-282 RQSVLARGAVNQHDG-QIIATNIDTIFICMSLNADFNVRRVERYLTIAWDSGAMPVLVLTKADVCTDRADKLRALADVTVGVPTVMCSAETGEGLEDLQPYLTAGQTVAFVGSSGVGKSTLINRLLGVTVLATKTIRQDDDKGRHTTTSRQLLPLPSGACVIDTPGMRELQI A0A199QG18/89-259 RQSVLARGAVNQHDG-QIIATNINTIFICMSLNADFNVRRVERYLTIAWDSGALPVIILTKADVCTDLAAKLRAVADVSVGVSTITCSAETGQGLDDLQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILTTKTIREDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQI A0A098R332/89-259 RQSVLARGAVNQHDG-QIIATNINTIFICMSLNADFNVRRVERYLTIAWDSGALPVIILTKADVCTDLAAKLRAVADVSVGVSTITCSAETGQGLDDLQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILTTKTIREDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQI A0A0E3RD11/134-304 -RTCLSRGAAGDGGGEQVIAANIDTIFIVTATGKDLNLRRLERYLAIVYSSGARPVILLNKIDLEDNPIRLVEKIQSIAGNVPVIPLSALSKTGLEALSPHLNPGETVALVGSSGVGKSTLINSLLGETVQRTGGIREDDEKGRHTTTVRQMFLLPNGAVLIDNPGIREIQL A0A1J0CF98/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLATKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- R9X2B6/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLATKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- T5JZ27/89-259 RQSVLARGAVNQHDG-QIIATNIDTIFICMSMNADFNVRRVERYLTIAWDSGAIPVLVLTKADVCTDRADKLRALADVTIGVPTVMCSAETGEGLEDLQPYLTAGQTVAFVGSSGVGKSTLINRLLGAAVLATKTIRQDDDKGRHTTTSRQLLPLPSGACVIDTPGMRELQI A0A165NIP4/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADVCTDLATKLRAVADVSVGVPTIACSAETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- D7V988/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLATKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- M4KHR6/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLATKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- A0A0P7GIK7/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLATKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- A0A0G9FBD9/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLATKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- A0A0R1UW18/89-258 RQSVLARGAVNHQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADVCTDLATKLRAVADVSVGVPTITCSAETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- A0A165WGG6/89-258 RQSVLARGAVNHQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADVCTDLATKLRAVADVSVGVPTITCSAETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- A0A151G7R8/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLSTKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- A0A162EAN9/89-258 RQSVLARGAVNRQDG-QIIATNINTIFICMSLNADFNVRRLERYLTIAWDSGALPVIVLTKADLCTDLATKLRAVADVSVGVPTITCSVETGQGLDELQPYLTTGQTVAFVGSSGVGKSTLINRLLGQDILATKSIRTDDDKGRHTTTSRQLIPLPTGACVIDTPGMRELQ- A0A0E3LUI7/103-273 -RTCLSRGAAGDGGGEQVIAANIDTIFIVTATGKDLNLRRLERYLAIVYSSGARPVILLNKIDLEDNPIRLVEKIQSIAGNVPVIPLSALSKTGLEALSPHLNPGETVALVGSSGVGKSTLINSLLGETVQRTGGIREDDEKGRHTTTVRQMFLLPNGAVLIDNPGIREIQL I8R6B0/89-259 RQSVLARGAVNQRDG-QIIATNIDTIFICMSLNADFNVRRVERYLTIAWDSGAMPVLVLTKADVCTDRADKLRALADVTIGVPTVMCSAETGEGLEDLQPYLTAGQTVAFVGSSGVGKSTLINRLLGAAVLATKTIRQDDDKGRHTTTSRQLLPLPSGACVIDTPGMRELQI #=GC scorecons 3665969996644690979969969999566565969699699996966699949976969696456454566565675569767459646549975959796596999699999999999995999457559559949979999999599656995995699699699692 #=GC scorecons_70 _**_******___**_************__*___**************__***_***_***_**__*____*_____*___**_*__**_*__***_*_****_*******************_***__*__*__**_**********_***__**_**_***********_ #=GC scorecons_80 ____*_***_____*_****_**_****______*_*_**_****_*___***_***_*_*_*______________*___**_*__*_____**__*_***__*_***_*************_***_____*__**_**_*******_**___**_**__**_**_**_*_ #=GC scorecons_90 ____*_***_____*_*_**_**_****______*_*_**_****_*___***_**__*_*_*__________________*_____*_____**__*_*_*__*_***_*************_***_____*__**_**_*******_**___**_**__**_**_**_*_ //