# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/629258
#=GF DE TFIIH complex helicase Rad3, putative
#=GF AC 3.40.50.300/FF/629258
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 27.406
#=GS B4MQM8/16-295                    AC B4MQM8
#=GS B4MQM8/16-295                    OS Drosophila willistoni
#=GS B4MQM8/16-295                    DE GK21904
#=GS B4MQM8/16-295                    DR GENE3D; c3c7469a6e8991c58118b8818107c2d2/16-295; 
#=GS B4MQM8/16-295                    DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS A0A0B7NDP6/2-68_173-227_419-452  AC A0A0B7NDP6
#=GS A0A0B7NDP6/2-68_173-227_419-452  OS Parasitella parasitica
#=GS A0A0B7NDP6/2-68_173-227_419-452  DE Uncharacterized protein
#=GS A0A0B7NDP6/2-68_173-227_419-452  DR GENE3D; e810d71bd65355ee782e629bc8ef048c/2-68_173-227_419-452; 
#=GS A0A0B7NDP6/2-68_173-227_419-452  DR ORG; Eukaryota; Fungi; Mucoromycota; Mucoromycotina; Mucorales; Mucorineae; Mucoraceae; Parasitella; Parasitella parasitica; 
#=GF TC 7.3 2.7E-04
#=GF SQ 2
B4MQM8/16-295                            YIYPEQYAYMLELKRSLDAKGHCLLEMPSGTGKTATLLSLIVAYMIEHPETIRKLIYCSRTVPEIEKVIAELQNLMVYYERHSDNPPAMTGLVLSSRKNMCIHPEVSKEREGKAVDGKCYGLTASYVRDRHEMDAETPICQYFEGFSLEGKEAALPVGIYSIDDMKEFGRSRNWCPYFMARHAIAHAHIVVYSYHYLLDPKIAQVVSKEMSRESCVVFDEAHNIDNVCIDSMSVKINRRTVERSTNALNQLTKLVQEIREEDTNRLNEEYQRMVQGLKDA
A0A0B7NDP6/2-68_173-227_419-452          ---------------------------PSGTGKTVSLLSLIVAYQMQNPDQHRKFIYCSRTVPEIDKALAELKNLMDY-----------------------------RQSQGLVEDFFGIGLT-------------------------------------------------------LVRRAIPFANVVIYSYHYMLDPKVAELVSRELSRDCIVVFDEAHNIDNVCIESLSASIAIKPV------FDRFSTVV--ITSGTLSPL-EMYPKML----NF
#=GC scorecons                           0000000000000000000000000009999999339999999914439521994999999999959349994999190000000000000000000000000000054249131900219990000000000000000000000000000000000000000000000000000000439499329359599999499995944995949953199999999999999594932921539000000444432490092232232909192594000041
#=GC scorecons_70                        ___________________________*******__********____*___**_**********_*__***_***_*_________________________________*___*____***_________________________________________________________*_**__*__*_*****_****_*__**_*_**___**************_*_*__*____*_____________*__*_______*_*_*__*_______
#=GC scorecons_80                        ___________________________*******__********____*___**_**********_*__***_***_*_________________________________*___*____***_________________________________________________________*_**__*__*_*****_****_*__**_*_**___**************_*_*__*____*_____________*__*_______*_*_*__*_______
#=GC scorecons_90                        ___________________________*******__********____*___**_**********_*__***_***_*_________________________________*___*____***_________________________________________________________*_**__*__*_*****_****_*__**_*_**___**************_*_*__*____*_____________*__*_______*_*_*__*_______
//