# STOCKHOLM 1.0 #=GF ID 3.40.50.300/FF/626245 #=GF DE Excinuclease ABC subunit A #=GF AC 3.40.50.300/FF/626245 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 53.906 #=GS Q8Y5K9/8-92_337-437 AC Q8Y5K9 #=GS Q8Y5K9/8-92_337-437 OS Listeria monocytogenes EGD-e #=GS Q8Y5K9/8-92_337-437 DE Lmo2050 protein #=GS Q8Y5K9/8-92_337-437 DR GENE3D; 6b60f95f54f144260f236f702edcefb8/8-92_337-437; #=GS Q8Y5K9/8-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS H5Y5I6/8-92_336-436 AC H5Y5I6 #=GS H5Y5I6/8-92_336-436 OS Desulfosporosinus youngiae DSM 17734 #=GS H5Y5I6/8-92_336-436 DE Excinuclease ATPase subunit #=GS H5Y5I6/8-92_336-436 DR GENE3D; 694f05b76e4200663b99c94072e8c034/8-92_336-436; #=GS H5Y5I6/8-92_336-436 DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus; Desulfosporosinus youngiae; #=GS A0A1D2J0K5/8-92_337-437 AC A0A1D2J0K5 #=GS A0A1D2J0K5/8-92_337-437 OS Listeria monocytogenes #=GS A0A1D2J0K5/8-92_337-437 DE Thiamine ABC transporter permease #=GS A0A1D2J0K5/8-92_337-437 DR GENE3D; 6b60f95f54f144260f236f702edcefb8/8-92_337-437; #=GS A0A1D2J0K5/8-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GS H7F6T1/7-92_337-437 AC H7F6T1 #=GS H7F6T1/7-92_337-437 OS Listeria fleischmannii subsp. coloradonensis #=GS H7F6T1/7-92_337-437 DE Excinuclease ABC, A subunit #=GS H7F6T1/7-92_337-437 DR GENE3D; 88a3facf090c950515a4c43777a3ab37/7-92_337-437; #=GS H7F6T1/7-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria fleischmannii; Listeria fleischmannii subsp. coloradonensis; #=GS K8E2J9/8-92_337-437 AC K8E2J9 #=GS K8E2J9/8-92_337-437 OS Carnobacterium maltaromaticum LMA28 #=GS K8E2J9/8-92_337-437 DE ABC transporter family protein #=GS K8E2J9/8-92_337-437 DR GENE3D; bdcc29a129b0a630748c3ececa85c260/8-92_337-437; #=GS K8E2J9/8-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium; Carnobacterium maltaromaticum; #=GS A0A0R2ILC8/8-92_337-437 AC A0A0R2ILC8 #=GS A0A0R2ILC8/8-92_337-437 OS Carnobacterium maltaromaticum DSM 20342 #=GS A0A0R2ILC8/8-92_337-437 DE Excinuclease subunit A #=GS A0A0R2ILC8/8-92_337-437 DR GENE3D; bdcc29a129b0a630748c3ececa85c260/8-92_337-437; #=GS A0A0R2ILC8/8-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium; Carnobacterium maltaromaticum; #=GS A0A1E5G8V1/7-91_332-432 AC A0A1E5G8V1 #=GS A0A1E5G8V1/7-91_332-432 OS Enterococcus termitis #=GS A0A1E5G8V1/7-91_332-432 DE Thiamine ABC transporter permease #=GS A0A1E5G8V1/7-91_332-432 DR GENE3D; f02bf557b50ec2c4d1d1e359967842df/7-91_332-432; #=GS A0A1E5G8V1/7-91_332-432 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus termitis; #=GS W7DC25/7-92_337-437 AC W7DC25 #=GS W7DC25/7-92_337-437 OS Listeria fleischmannii FSL S10-1203 #=GS W7DC25/7-92_337-437 DE Excinuclease ABC subunit A #=GS W7DC25/7-92_337-437 DR GENE3D; 1417e6be23ee84f93f8085b4fa1daaab/7-92_337-437; #=GS W7DC25/7-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria fleischmannii; #=GS W7CYJ5/8-92_337-437 AC W7CYJ5 #=GS W7CYJ5/8-92_337-437 OS Listeria riparia FSL S10-1204 #=GS W7CYJ5/8-92_337-437 DE Excinuclease ABC subunit A #=GS W7CYJ5/8-92_337-437 DR GENE3D; 6ba46375cae4e32b36dd3979f297d8f4/8-92_337-437; #=GS W7CYJ5/8-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria riparia; #=GS A0A1E5GGP2/7-91_332-432 AC A0A1E5GGP2 #=GS A0A1E5GGP2/7-91_332-432 OS Enterococcus ureasiticus #=GS A0A1E5GGP2/7-91_332-432 DE Thiamine ABC transporter permease #=GS A0A1E5GGP2/7-91_332-432 DR GENE3D; 84a8f91b0551e7033562d32440012fa9/7-91_332-432; #=GS A0A1E5GGP2/7-91_332-432 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus ureasiticus; #=GS A0AKF6/8-92_337-437 AC A0AKF6 #=GS A0AKF6/8-92_337-437 OS Listeria welshimeri serovar 6b str. SLCC5334 #=GS A0AKF6/8-92_337-437 DE UvrABC system protein A #=GS A0AKF6/8-92_337-437 DR GENE3D; a1efe6ee191d57667c23eba243091a1b/8-92_337-437; #=GS A0AKF6/8-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria welshimeri; #=GS W7BQP4/8-92_337-437 AC W7BQP4 #=GS W7BQP4/8-92_337-437 OS Listeria grandensis FSL F6-0971 #=GS W7BQP4/8-92_337-437 DE ABC transporter family protein #=GS W7BQP4/8-92_337-437 DR GENE3D; eb67024aaff1d06f3628028df2b3a34a/8-92_337-437; #=GS W7BQP4/8-92_337-437 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria grandensis; #=GS A0A022NAH9/6-91_335-435 AC A0A022NAH9 #=GS A0A022NAH9/6-91_335-435 OS Enterococcus mundtii CRL35 #=GS A0A022NAH9/6-91_335-435 DE Thiamine ABC transporter permease #=GS A0A022NAH9/6-91_335-435 DR GENE3D; e7e4cd9591e46b017e74888c1faba424/6-91_335-435; #=GS A0A022NAH9/6-91_335-435 DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus; Enterococcus mundtii; #=GS A0A0E1Y1D3/5-105 AC A0A0E1Y1D3 #=GS A0A0E1Y1D3/5-105 OS Listeria monocytogenes FSL F2-208 #=GS A0A0E1Y1D3/5-105 DE UvrABC system protein A #=GS A0A0E1Y1D3/5-105 DR GENE3D; fddee6c69f580b9161af25eeceebecc8/5-105; #=GS A0A0E1Y1D3/5-105 DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria; Listeria monocytogenes; #=GF TC 179.6 1.1E-55 #=GF SQ 14 Q8Y5K9/8-92_337-437 -LRGARENNLQNISLDIPKRKITIFTGVSGSGKSSIVFETIATESQRQLNETYSAYLRNFLPKYTQPDADSIENLSTSVIIDQKRLSGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTILVVEHDPDVIKIADHVVDVGPHAGKHGGEIQFVGSYTDLLKSDTLTG H5Y5I6/8-92_336-436 -IIGARANNLKNISLKIPKKKISIFTGVSGSGKSSIVFETIAQEAGRQLNETFSKFIQGFLPKYGHPDVDAIENLSLAIIVDQKRISGGESQRVKMVKHLTSSLTDVMYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTVIVVEHDPDVIKVADYIVDVGPKAGTNGGRIMFEGSYSDLLKSQTLTG A0A1D2J0K5/8-92_337-437 -LRGARENNLQNISLDIPKRKITIFTGVSGSGKSSIVFETIATESQRQLNETYSAYLRNFLPKYTQPDADSIENLSTSVIIDQKRLSGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTILVVEHDPDVIKIADHVVDVGPHAGKHGGEIQFVGSYTDLLKSDTLTG H7F6T1/7-92_337-437 EIKGARENNLKNVSVRIPKRKITIFTGVSGSGKSSIVFGTVATESQRQLNETHSAFVRGFLPKYREPDTDGISGLGASIIIDQKRISGGESQRVKMVRHLNSSLTDMIYIFDEPSIGLHPRDVHRLNELLEKLRDKGNTVLVVEHDPDVIRIADHIIDIGPHAGKNGGTITFQGTYDALLKSDTLTG K8E2J9/8-92_337-437 -LNGARENNLKNISLAIPKRKITIFTGVSGSGKSSIVFGTIATESQRQLNETYSAYLRNFLPKYQQPDADSIENLSTSVIIDQKRLSGGESQRVKMVRHLSSSLTDLLYIFDEPSVGLHPKDVHRLNELLVKLRDKGNTVLVVEHDPDVIKIADHIVDVGPLAGKKGGEIMFEGSYADLLTSDTLTG A0A0R2ILC8/8-92_337-437 -LNGARENNLKNISLAIPKRKITIFTGVSGSGKSSIVFGTIATESQRQLNETYSAYLRNFLPKYQQPDADSIENLSTSVIIDQKRLSGGESQRVKMVRHLSSSLTDLLYIFDEPSVGLHPKDVHRLNELLVKLRDKGNTVLVVEHDPDVIKIADHIVDVGPLAGKKGGEIMFEGSYADLLTSDTLTG A0A1E5G8V1/7-91_332-432 -INGARENNLKNVSVKIPKRKITVFTGVSGSGKSSIVFETIANESQRQLNETFSAFIQNFLPKYQQPDVDSIENLSTSVVINQKRLSGGESQRVKMVKHLNNSLVDLIYIFDEPSIGLHPRDVHRLNELLFKLRDKGNTVIVIEHDPDVIKIADHVIEVGPQAGKHGGNIMFEGTYQELLASDTLTG W7DC25/7-92_337-437 EIKGARENNLKNVSVRIPKRKITIFTGVSGSGKSSIVFGTVATESQRQLNETHSAFVRGFLPKYREPDTDGISGLGASIIIDQKRISGGESQRVKMVRHLNSSLTDMIYIFDEPSIGLHPRDVHRLNELLEKLRDKGNTVLVVEHDPDVIRIADHIIDIGPHAGKNGGTITFQGTYDALLKSDTLTG W7CYJ5/8-92_337-437 -LVGARENNLKNVSLRIPKRKITIFTGVSGSGKSSIVFGTIATESQRQLNETYSSFIRTFLPKYRQPDADKIENLSTSVIIDQKRLSGGESQRVKMVRHLTSSLTDLLYIFDEPSVGLHPRDVHRLNELLQKLRDKGNTVIVVEHDPDVIKIADHIVDVGPHAGKQGGEIMFEGSFENLLKSDTLTG A0A1E5GGP2/7-91_332-432 -INGARENNLKNVSVKIPKRKITVFTGVSGSGKSSIVFETIANESQRQLNETFSAFIQNFLPKYQHPDVDSIENLSTSVVINQKRLSGGESQRVKMVKHLNNSLVDLIYIFDEPSIGLHPRDVHRLNELLFKLRDKGNTVIVIEHDPDVIKIADHVIEVGPQAGKHGGNIMFEGTYKDLLESDTLTG A0AKF6/8-92_337-437 -LRGARENNLQNISLDIPKRKITIFTGVSGSGKSSIVFETIATESQRQLNETYSAYLRNFLPKYAQPDADSIENLSTSVIIDQKRLSGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLIKLRDKGNTILVVEHDPDVIKIADHIVDVGPEAGKNGGEIQFVGSYEDLLKSDTLTG W7BQP4/8-92_337-437 -LIGARENNLKNVSIQVPKRKITIFTGVSGSGKSSIVFGTIATESQRQLNETYSNYIRNFLPKYRQPDADKIENLSTSVIIDQKRLSGGESQRIKMVRHLNSSLTDLLYIFDEPSVGLHPRDVHRLNELLQKLRDKGNTVIVVEHDPDVIQIADHIIDVGPGAGKQGGEIMFEGDFDGLLKSDTLTG A0A022NAH9/6-91_335-435 KIHNARQNNLKGFDLQIPKRKITIFTGVSGSGKSSIVFDTIAQEAGRQLNENFSKFVQNFLPKYSQPEADAIDNLSMAVVVDQSRLSGGESQRVKMVRHLSSSLNDVIYIFDEPSIGLHPRDVHRLNELLIKLRDKGNTVIVVEHDPDVIKVADHIIDVGPKAGKNGGYITYEGSYEGLLSSDTLTG A0A0E1Y1D3/5-105 --------------------------------------------------------------------------------------SGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTILVVEHDPDVIKIADYIVDVGPHAGKHGGEIQFVGSYTDLLKSDTLTG #=GC scorecons 0324554555443432555555445555555555555535453544555554353434355555235535253454344444545499999998997799679969669999999799998999999999499999999769899999997799777889949985994948496835995989999 #=GC scorecons_70 ______________________________________________________________________________________**************_******_**********************_******************************_***_**_*_*_*_*__**_****** #=GC scorecons_80 ______________________________________________________________________________________**********_***_***_*__**********************_********__***************_****_***_**_*_*_*_*__**_****** #=GC scorecons_90 ______________________________________________________________________________________**********__**__**_*__*******_**************_********__*********__**___*_**_**__**_*_*_*_*__**_****** //