# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/622341
#=GF DE Transcriptional regulatory protein PvdS
#=GF AC 3.40.50.300/FF/622341
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 31.480
#=GS O05877/4-274      AC O05877
#=GS O05877/4-274      OS Mycobacterium tuberculosis H37Rv
#=GS O05877/4-274      DE Polyphosphate kinase 2
#=GS O05877/4-274      DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS O05877/4-274      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS O05877/4-274      DR GO; GO:0005515; GO:0005525; GO:0005886; GO:0006183; GO:0008976; GO:0030808; GO:0044121; GO:0046777; 
#=GS Q5LX16/16-291     AC Q5LX16
#=GS Q5LX16/16-291     OS Ruegeria pomeroyi DSS-3
#=GS Q5LX16/16-291     DE Polyphosphate kinase, putative
#=GS Q5LX16/16-291     DR GENE3D; dbe8379a908da0090d3f18e3217b0cf1/16-291; 
#=GS Q5LX16/16-291     DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria; Ruegeria pomeroyi; 
#=GS Q5LX16/16-291     DR GO; GO:0006793; GO:0008976; 
#=GS A0A045IA66/4-274  AC A0A045IA66
#=GS A0A045IA66/4-274  OS Mycobacterium tuberculosis
#=GS A0A045IA66/4-274  DE Transcriptional regulator PVDS ( RNA polymerase sigma factor)
#=GS A0A045IA66/4-274  DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS A0A045IA66/4-274  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS F8M6E7/4-274      AC F8M6E7
#=GS F8M6E7/4-274      OS Mycobacterium africanum GM041182
#=GS F8M6E7/4-274      DE Putative transcriptional regulatory protein PVDS (Putative RNA polymerase sigma factor)
#=GS F8M6E7/4-274      DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS F8M6E7/4-274      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium africanum; 
#=GS A0A0H3LL75/4-274  AC A0A0H3LL75
#=GS A0A0H3LL75/4-274  OS Mycobacterium tuberculosis str. Erdman = ATCC 35801
#=GS A0A0H3LL75/4-274  DE Transcriptional regulator
#=GS A0A0H3LL75/4-274  DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS A0A0H3LL75/4-274  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A5U7Q6/4-274      AC A5U7Q6
#=GS A5U7Q6/4-274      OS Mycobacterium tuberculosis H37Ra
#=GS A5U7Q6/4-274      DE Putative RNA polymerase sigma factor
#=GS A5U7Q6/4-274      DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS A5U7Q6/4-274      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS R4MIE3/4-274      AC R4MIE3
#=GS R4MIE3/4-274      OS Mycobacterium tuberculosis CAS/NITR204
#=GS R4MIE3/4-274      DE Transcriptional regulator
#=GS R4MIE3/4-274      DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS R4MIE3/4-274      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0C7DM53/4-274  AC A0A0C7DM53
#=GS A0A0C7DM53/4-274  OS Mycobacterium bovis
#=GS A0A0C7DM53/4-274  DE Polyphosphate kinase
#=GS A0A0C7DM53/4-274  DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS A0A0C7DM53/4-274  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium bovis; 
#=GS L7N5M0/4-274      AC L7N5M0
#=GS L7N5M0/4-274      OS Mycobacterium tuberculosis CDC1551
#=GS L7N5M0/4-274      DE RNA polymerase sigma factor, putative
#=GS L7N5M0/4-274      DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS L7N5M0/4-274      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium tuberculosis; 
#=GS A0A0H3MEA0/4-274  AC A0A0H3MEA0
#=GS A0A0H3MEA0/4-274  OS Mycobacterium bovis BCG str. Pasteur 1173P2
#=GS A0A0H3MEA0/4-274  DE Possible transcriptional regulatory protein pvdS
#=GS A0A0H3MEA0/4-274  DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS A0A0H3MEA0/4-274  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium bovis; 
#=GS A0A0H3P5G3/4-274  AC A0A0H3P5G3
#=GS A0A0H3P5G3/4-274  OS Mycobacterium bovis AF2122/97
#=GS A0A0H3P5G3/4-274  DE Polyphosphate kinase ppk2 (Polyphosphoric acid kinase)
#=GS A0A0H3P5G3/4-274  DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS A0A0H3P5G3/4-274  DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium bovis; 
#=GS M8D1T9/4-274      AC M8D1T9
#=GS M8D1T9/4-274      OS Mycobacterium orygis 112400015
#=GS M8D1T9/4-274      DE Transcriptional regulatory protein PvdS
#=GS M8D1T9/4-274      DR GENE3D; 2c68177b777e66737e4c642c7bf49aad/4-274; 
#=GS M8D1T9/4-274      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex; Mycobacterium orygis; 
#=GF TC 554.5 3.6E-171
#=GF SQ 12
O05877/4-274              ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
Q5LX16/16-291             ELEDSLDEDFEIEFSEPMLSMEIRRIYKDQRPDLLDRQVYFRNLLRLQAELIKLQDWVQHTNSKVLIIMEGRDAAGKGGVIKRITQRLNPRIARVVALPAPSRREQSQWYFQRYVPYLPSGGEMVLFDRSWYNRAGVERVMGFATEDQVEQFFQDVPEFERMLVRSGIILLKYWFSITDEEQQLRFLMRVHDPMKQWKLSPMDLESRIRWEQYTKAKEQMFSRTNIPEAPWYIVEGNDKKRERLNCIEHLLSKIPYEDIPHEKVTLPDRRYNPDYE
A0A045IA66/4-274          ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
F8M6E7/4-274              ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
A0A0H3LL75/4-274          ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
A5U7Q6/4-274              ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
R4MIE3/4-274              ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
A0A0C7DM53/4-274          ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
L7N5M0/4-274              ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
A0A0H3MEA0/4-274          ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
A0A0H3P5G3/4-274          ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
M8D1T9/4-274              ---PSVDVSTATNDGASSRAKGHRSAAPGRRK--ISDAVYQAELFRLQTEFVKLQEWARHSGARLVVIFEGRDGAGKGGAIKRITEYLNPRVARIAALPAPTDRERGQWYYQRYIAHLPAKGEIVLFDRSWYNRAGVEKVMGFCTPQEYVLFLRQTPIFEQMLIDDGILLRKYWFSVSDAEQLRRFKARRNDPVRQWKLSPMDLESVYRWEDYSRAKDEMMVHTDTPVSPWYVVESDIKKHARLNMMAHLLSTIDYADVEKPKVKLPPRPLVSGNY
#=GC scorecons            000495944445525454354539443455940054449934595999595699969559545655694999959999959999954999969965999995499559996999656995499699999999999999699994944534495544939959964499593999996594994399349359956999999999993499949569965944595594599969955399549994649999494949645499499494445543
#=GC scorecons_70         ____*_*________________*______*_______**___*_***_*_******__*___*__**_****_*****_*****__********_*****__**__********_***__**_*******************_*______*____*_**_***__**_*_******_*_**__**__*__**_************__***_*_****_*___*__*__******___**__***___****_*_*_**___**_**_*_______
#=GC scorecons_80         ____*_*________________*______*_______**___*_***_*__***_*__*_______*_****_*****_*****__****_**__*****__**__***_***___**__**_**************_****_*______*____*_**_**___**_*_*****__*_**__**__*__**__***********__***_*__**__*___*__*__***_**___**__***___****_*_*_*____**_**_*_______
#=GC scorecons_90         ____*_*________________*______*_______**___*_***_*__***_*__*_______*_****_*****_*****__****_**__*****__**__***_***___**__**_**************_****_*______*____*_**_**___**_*_*****__*_**__**__*__**__***********__***_*__**__*___*__*__***_**___**__***___****_*_*_*____**_**_*_______
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