# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/616636
#=GF DE ATP-dependent helicase/nuclease subunit A
#=GF AC 3.40.50.300/FF/616636
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 22.110
#=GS U4QDY0/466-605_765-802_828-905      AC U4QDY0
#=GS U4QDY0/466-605_765-802_828-905      OS Lactobacillus helveticus CIRM-BIA 953
#=GS U4QDY0/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS U4QDY0/466-605_765-802_828-905      DR GENE3D; 05ba1fca6828b0f118112f9181d97d6c/466-605_765-802_828-905; 
#=GS U4QDY0/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS U4QDY0/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS A0A0R2MVA8/466-605_765-802_828-905  AC A0A0R2MVA8
#=GS A0A0R2MVA8/466-605_765-802_828-905  OS Lactobacillus helveticus
#=GS A0A0R2MVA8/466-605_765-802_828-905  DE ATP-dependent helicase/nuclease subunit A
#=GS A0A0R2MVA8/466-605_765-802_828-905  DR GENE3D; 125081d1cee292d645ce160b95ab42cb/466-605_765-802_828-905; 
#=GS A0A0R2MVA8/466-605_765-802_828-905  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS A0A0R2MVA8/466-605_765-802_828-905  DR EC; 3.6.4.12; 
#=GS J4BQH3/466-605_765-802_828-905      AC J4BQH3
#=GS J4BQH3/466-605_765-802_828-905      OS Lactobacillus helveticus R0052
#=GS J4BQH3/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS J4BQH3/466-605_765-802_828-905      DR GENE3D; 125081d1cee292d645ce160b95ab42cb/466-605_765-802_828-905; 
#=GS J4BQH3/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS J4BQH3/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS U6FLV9/466-605_765-802_828-905      AC U6FLV9
#=GS U6FLV9/466-605_765-802_828-905      OS Lactobacillus helveticus CIRM-BIA 103
#=GS U6FLV9/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS U6FLV9/466-605_765-802_828-905      DR GENE3D; 28f5527df0a83db443c8870cc4ed49dd/466-605_765-802_828-905; 
#=GS U6FLV9/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS U6FLV9/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS U6FM92/466-605_765-802_828-905      AC U6FM92
#=GS U6FM92/466-605_765-802_828-905      OS Lactobacillus helveticus CIRM-BIA 101
#=GS U6FM92/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS U6FM92/466-605_765-802_828-905      DR GENE3D; 28f5527df0a83db443c8870cc4ed49dd/466-605_765-802_828-905; 
#=GS U6FM92/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS U6FM92/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS A0A0D5MJD9/466-605_765-802_828-905  AC A0A0D5MJD9
#=GS A0A0D5MJD9/466-605_765-802_828-905  OS Lactobacillus helveticus
#=GS A0A0D5MJD9/466-605_765-802_828-905  DE ATP-dependent helicase/nuclease subunit A
#=GS A0A0D5MJD9/466-605_765-802_828-905  DR GENE3D; 385d6b48e35228da9c59c55cc841ac11/466-605_765-802_828-905; 
#=GS A0A0D5MJD9/466-605_765-802_828-905  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS A0A0D5MJD9/466-605_765-802_828-905  DR EC; 3.6.4.12; 
#=GS W5XG79/466-605_765-802_828-905      AC W5XG79
#=GS W5XG79/466-605_765-802_828-905      OS Lactobacillus helveticus H9
#=GS W5XG79/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS W5XG79/466-605_765-802_828-905      DR GENE3D; 3982ce1a04723fb2b4d514958454843c/466-605_765-802_828-905; 
#=GS W5XG79/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS W5XG79/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS U6FBN7/466-605_765-802_828-905      AC U6FBN7
#=GS U6FBN7/466-605_765-802_828-905      OS Lactobacillus helveticus CIRM-BIA 104
#=GS U6FBN7/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS U6FBN7/466-605_765-802_828-905      DR GENE3D; 41b0ef82e1b681231a46b8426dc77dd7/466-605_765-802_828-905; 
#=GS U6FBN7/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS U6FBN7/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS A0A0R1NNJ2/466-605_765-802_828-905  AC A0A0R1NNJ2
#=GS A0A0R1NNJ2/466-605_765-802_828-905  OS Lactobacillus gallinarum DSM 10532 = JCM 2011
#=GS A0A0R1NNJ2/466-605_765-802_828-905  DE ATP-dependent helicase/nuclease subunit A
#=GS A0A0R1NNJ2/466-605_765-802_828-905  DR GENE3D; ab517002faed62c4100722294450de36/466-605_765-802_828-905; 
#=GS A0A0R1NNJ2/466-605_765-802_828-905  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus gallinarum; 
#=GS A0A0R1NNJ2/466-605_765-802_828-905  DR EC; 3.6.4.12; 
#=GS A0A0P0DU66/466-605_765-802_828-905  AC A0A0P0DU66
#=GS A0A0P0DU66/466-605_765-802_828-905  OS Lactobacillus gallinarum
#=GS A0A0P0DU66/466-605_765-802_828-905  DE ATP-dependent helicase/nuclease subunit A
#=GS A0A0P0DU66/466-605_765-802_828-905  DR GENE3D; ae7a36be53ce37e9fa3981c87de71e85/466-605_765-802_828-905; 
#=GS A0A0P0DU66/466-605_765-802_828-905  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus gallinarum; 
#=GS A0A0P0DU66/466-605_765-802_828-905  DR EC; 3.6.4.12; 
#=GS F0NSL7/466-605_765-802_828-905      AC F0NSL7
#=GS F0NSL7/466-605_765-802_828-905      OS Lactobacillus helveticus H10
#=GS F0NSL7/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS F0NSL7/466-605_765-802_828-905      DR GENE3D; c8829799bc0eb2cca8d6b60e3b630a49/466-605_765-802_828-905; 
#=GS F0NSL7/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS F0NSL7/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS U6F5Y9/466-605_765-802_828-905      AC U6F5Y9
#=GS U6F5Y9/466-605_765-802_828-905      OS Lactobacillus helveticus CIRM-BIA 951
#=GS U6F5Y9/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS U6F5Y9/466-605_765-802_828-905      DR GENE3D; c97ac2f739f70397f5001bc7d8c493f2/466-605_765-802_828-905; 
#=GS U6F5Y9/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS U6F5Y9/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS A8YVK0/466-605_765-802_828-905      AC A8YVK0
#=GS A8YVK0/466-605_765-802_828-905      OS Lactobacillus helveticus DPC 4571
#=GS A8YVK0/466-605_765-802_828-905      DE ATP-dependent helicase/nuclease subunit A
#=GS A8YVK0/466-605_765-802_828-905      DR GENE3D; c97ac2f739f70397f5001bc7d8c493f2/466-605_765-802_828-905; 
#=GS A8YVK0/466-605_765-802_828-905      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS A8YVK0/466-605_765-802_828-905      DR EC; 3.6.4.12; 
#=GS A0A1B2IPW0/466-605_765-802_828-905  AC A0A1B2IPW0
#=GS A0A1B2IPW0/466-605_765-802_828-905  OS Lactobacillus helveticus
#=GS A0A1B2IPW0/466-605_765-802_828-905  DE ATP-dependent helicase/nuclease subunit A
#=GS A0A1B2IPW0/466-605_765-802_828-905  DR GENE3D; e98b807cfab34d84934534556f10fd68/466-605_765-802_828-905; 
#=GS A0A1B2IPW0/466-605_765-802_828-905  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus helveticus; 
#=GS A0A1B2IPW0/466-605_765-802_828-905  DR EC; 3.6.4.12; 
#=GS Q5FJX0/466-605_765-802_828-906      AC Q5FJX0
#=GS Q5FJX0/466-605_765-802_828-906      OS Lactobacillus acidophilus NCFM
#=GS Q5FJX0/466-605_765-802_828-906      DE ATP-dependent helicase/nuclease subunit A
#=GS Q5FJX0/466-605_765-802_828-906      DR GENE3D; 3ee1b44b91fa96ee3aef509c50c40cb3/466-605_765-802_828-906; 
#=GS Q5FJX0/466-605_765-802_828-906      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus acidophilus; 
#=GS Q5FJX0/466-605_765-802_828-906      DR EC; 3.6.4.12; 
#=GF TC 531.0 1.7E-163
#=GF SQ 15
U4QDY0/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSENEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLNFIGPSL-
A0A0R2MVA8/466-605_765-802_828-905          SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSENEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
J4BQH3/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSENEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
U6FLV9/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSKNEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
U6FM92/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSKNEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
A0A0D5MJD9/466-605_765-802_828-905          SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSKNEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
W5XG79/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSKNEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
U6FBN7/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSKNEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
A0A0R1NNJ2/466-605_765-802_828-905          SDNFRSTEPVTETVNLVFKSILSTDFGGIDYQKEGQLVFGAKYYPKSLPQASEVIIHEKKNGTNKDESEIDFSEIQMVLARIKQLEEEHVQVFDSNTGKMRDMQYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
A0A0P0DU66/466-605_765-802_828-905          SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSENEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKRQLLEEEARILYVALTRAKQKLILVGDVPSFNKQVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
F0NSL7/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSENEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
U6F5Y9/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSENEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
A8YVK0/466-605_765-802_828-905              SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSENEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
A0A1B2IPW0/466-605_765-802_828-905          SDNFRSTEPVTQTVNAVFKSILSTDFGGIDYQKEGQLIFGAKYYPKSLPQASEVIVHEKKNNNEKSKNEIDFSEIQMVLARIKQLEDEHVQIFDSNTGKMRDMEYSDIAILTRSRSDNLEIMQEFAKQDIPLFVTDAENYLTKEAGNAVRLMTIHGSKGLEFPIVFYVGMQHHYQMRDLVKAMGNITKKQQLLEEEARILYVALTRAKQKLILVGDVPSFNKKVKEWSTELNHAGQLPLINKLSATSPLSFIGPSL-
Q5FJX0/466-605_765-802_828-906              SDNFRSTEPVTKTVNQLFKSILSSDFGGIDYSKEGQLIFGAKYYPDALPKASEIIVHKKQKDIDNDNNGIDFSEVEMVLARIKQLKKEHFQVLDSTTGEVRALKYSDIAILTRSHGDNLEIMQEFAKRDIPLFITDAENYLSKEAGNAVRLMTIHGSKGLEFPVVFYLGMQHQYQLRDLVKAIGNVTKKRQLLEEEARVLYVALTRAKQKLILVGDIANLDKKVQDWSIELDQSGQLSLADKLSVTNPLGFMGPALA
#=GC scorecons                              99999999999599946999999599999995999998999999955996999698959655465547599999669999999995599596699599569565999999999965999999999996999996999999959999999999999999999996999699996996999999699699969999999969999999999999999965566989669959966599959569995959959699590
#=GC scorecons_70                           ***********_***__******_*******_*************__**_*******_*________*_******_*********__**_**_**_**__*_*_**********__***********_*************_*************************_*********************_***************************____***_***_**_*_***_*__***_*_**_****_*_
#=GC scorecons_80                           ***********_***__******_*******_*************__**_***_***_*________*_*****__*********__**_*__**_**__*___**********__***********_*****_*******_*********************_***_****_**_******_**_***_********_*****************_____***__**_**___***_*__***_*_**_*_**_*_
#=GC scorecons_90                           ***********_***__******_*******_*************__**_***_***_*__________*****__*********__**_*__**_**__*___**********__***********_*****_*******_*********************_***_****_**_******_**_***_********_*****************_____***__**_**___***_*__***_*_**_*_**_*_
//