# STOCKHOLM 1.0 #=GF ID 3.40.50.300/FF/540292 #=GF DE DEAD/DEAH box helicase factory #=GF AC 3.40.50.300/FF/540292 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 39.912 #=GS Q8LMR2/330-436 AC Q8LMR2 #=GS Q8LMR2/330-436 OS Oryza sativa Japonica Group #=GS Q8LMR2/330-436 DE Endoribonuclease Dicer homolog 1 #=GS Q8LMR2/330-436 DR GENE3D; 7b2dc04f119aec6b617e27feb83db263/330-436; #=GS Q8LMR2/330-436 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS Q8LMR2/330-436 DR GO; GO:0007275; GO:0035196; #=GS A0A0E0NNY5/330-436 AC A0A0E0NNY5 #=GS A0A0E0NNY5/330-436 OS Oryza rufipogon #=GS A0A0E0NNY5/330-436 DE Uncharacterized protein #=GS A0A0E0NNY5/330-436 DR GENE3D; 19a007bb52d58359515918a8f51b488d/330-436; #=GS A0A0E0NNY5/330-436 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; #=GS A0A0D9VNU2/343-451 AC A0A0D9VNU2 #=GS A0A0D9VNU2/343-451 OS Leersia perrieri #=GS A0A0D9VNU2/343-451 DE Uncharacterized protein #=GS A0A0D9VNU2/343-451 DR GENE3D; 1b92c44ab39a673dde65cbf31e158495/343-451; #=GS A0A0D9VNU2/343-451 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A1D6JLT9/6-126 AC A0A1D6JLT9 #=GS A0A1D6JLT9/6-126 OS Zea mays #=GS A0A1D6JLT9/6-126 DE Uncharacterized protein #=GS A0A1D6JLT9/6-126 DR GENE3D; 1f523ba8a95f660d4dd029b9672a5c4b/6-126; #=GS A0A1D6JLT9/6-126 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Andropogoneae; Tripsacinae; Zea; Zea mays; #=GS A0A1E5VVL6/289-395 AC A0A1E5VVL6 #=GS A0A1E5VVL6/289-395 OS Dichanthelium oligosanthes #=GS A0A1E5VVL6/289-395 DE Endoribonuclease Dicer-like protein 1 #=GS A0A1E5VVL6/289-395 DR GENE3D; 2312183b27ddd658eb4221980e1763bd/289-395; #=GS A0A1E5VVL6/289-395 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Panicoideae; Paniceae; Dichantheliinae; Dichanthelium; Dichanthelium oligosanthes; #=GS A0A078FQR9/278-384 AC A0A078FQR9 #=GS A0A078FQR9/278-384 OS Brassica napus #=GS A0A078FQR9/278-384 DE BnaC05g00860D protein #=GS A0A078FQR9/278-384 DR GENE3D; 694d5e20e5be6dd3a6e10a96d8e18723/278-384; #=GS A0A078FQR9/278-384 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A0D9VNU3/333-439 AC A0A0D9VNU3 #=GS A0A0D9VNU3/333-439 OS Leersia perrieri #=GS A0A0D9VNU3/333-439 DE Uncharacterized protein #=GS A0A0D9VNU3/333-439 DR GENE3D; 892c6ab8254b4f4e45475876b47edfb2/333-439; #=GS A0A0D9VNU3/333-439 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS M0VIK6/6-126 AC M0VIK6 #=GS M0VIK6/6-126 OS Hordeum vulgare subsp. vulgare #=GS M0VIK6/6-126 DE Uncharacterized protein #=GS M0VIK6/6-126 DR GENE3D; 93f1df9d542ba1670e07e113f739066d/6-126; #=GS M0VIK6/6-126 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A2XBW0/330-436 AC A2XBW0 #=GS A2XBW0/330-436 OS Oryza sativa Indica Group #=GS A2XBW0/330-436 DE Putative uncharacterized protein #=GS A2XBW0/330-436 DR GENE3D; 99661baf91d621d69bacb52bc647152b/330-436; #=GS A2XBW0/330-436 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; #=GS A0A0D9VNU4/333-400 AC A0A0D9VNU4 #=GS A0A0D9VNU4/333-400 OS Leersia perrieri #=GS A0A0D9VNU4/333-400 DE Uncharacterized protein #=GS A0A0D9VNU4/333-400 DR GENE3D; 9b52e98ba73591bea9860cf5f84898c9/333-400; #=GS A0A0D9VNU4/333-400 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A078DM66/280-387 AC A0A078DM66 #=GS A0A078DM66/280-387 OS Brassica napus #=GS A0A078DM66/280-387 DE BnaA10g00800D protein #=GS A0A078DM66/280-387 DR GENE3D; a64189ef410780e542c24305b429f890/280-387; #=GS A0A078DM66/280-387 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS I1P702/329-435 AC I1P702 #=GS I1P702/329-435 OS Oryza glaberrima #=GS I1P702/329-435 DE Uncharacterized protein #=GS I1P702/329-435 DR GENE3D; bc75289d87c7e29c890f08ac76a34700/329-435; #=GS I1P702/329-435 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; #=GS A0A0D9VNT9/333-439 AC A0A0D9VNT9 #=GS A0A0D9VNT9/333-439 OS Leersia perrieri #=GS A0A0D9VNT9/333-439 DE Uncharacterized protein #=GS A0A0D9VNT9/333-439 DR GENE3D; d1e6443928944515d81667fea514eddc/333-439; #=GS A0A0D9VNT9/333-439 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS M0VIK8/6-126 AC M0VIK8 #=GS M0VIK8/6-126 OS Hordeum vulgare subsp. vulgare #=GS M0VIK8/6-126 DE Uncharacterized protein #=GS M0VIK8/6-126 DR GENE3D; dfed83c9450d968c86c2b119d1efe3fb/6-126; #=GS M0VIK8/6-126 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Triticeae; Hordeinae; Hordeum; Hordeum vulgare; Hordeum vulgare subsp. vulgare; #=GS A0A0D9Z1C5/330-436 AC A0A0D9Z1C5 #=GS A0A0D9Z1C5/330-436 OS Oryza glumipatula #=GS A0A0D9Z1C5/330-436 DE Uncharacterized protein #=GS A0A0D9Z1C5/330-436 DR GENE3D; f71802c7929d9d71fed6de97891b9ef0/330-436; #=GS A0A0D9Z1C5/330-436 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glumipatula; #=GS A0A0E0GB96/330-436 AC A0A0E0GB96 #=GS A0A0E0GB96/330-436 OS Oryza nivara #=GS A0A0E0GB96/330-436 DE Uncharacterized protein #=GS A0A0E0GB96/330-436 DR GENE3D; 1c9695600cf759c6a2ba93073248ec5f/330-436; #=GS A0A0E0GB96/330-436 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza nivara; #=GS A0A0D3FD50/329-435 AC A0A0D3FD50 #=GS A0A0D3FD50/329-435 OS Oryza barthii #=GS A0A0D3FD50/329-435 DE Uncharacterized protein #=GS A0A0D3FD50/329-435 DR GENE3D; 423d501ba6dd2473144137e6f13b71c3/329-435; #=GS A0A0D3FD50/329-435 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; #=GS Q6V8T4/1-70 AC Q6V8T4 #=GS Q6V8T4/1-70 OS Malus domestica #=GS Q6V8T4/1-70 DE DEAD/DEAH box helicase factory #=GS Q6V8T4/1-70 DR GENE3D; 5e12349b1e0ad0733e3f5f66315128fe/1-70; #=GS Q6V8T4/1-70 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Rosales; Rosaceae; Maloideae; Maleae; Malus; Malus domestica; #=GS I1HAD8/333-439 AC I1HAD8 #=GS I1HAD8/333-439 OS Brachypodium distachyon #=GS I1HAD8/333-439 DE Uncharacterized protein #=GS I1HAD8/333-439 DR GENE3D; 98635045bd154c940238a56eb77be961/333-439; #=GS I1HAD8/333-439 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Pooideae; Brachypodieae; Brachypodium; Brachypodium distachyon; #=GS A0A0E0CUD0/333-439 AC A0A0E0CUD0 #=GS A0A0E0CUD0/333-439 OS Oryza meridionalis #=GS A0A0E0CUD0/333-439 DE Uncharacterized protein #=GS A0A0E0CUD0/333-439 DR GENE3D; d648cf4ee9beb98269b801185c38b81d/333-439; #=GS A0A0E0CUD0/333-439 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; #=GS A0A0D9VNU0/317-428 AC A0A0D9VNU0 #=GS A0A0D9VNU0/317-428 OS Leersia perrieri #=GS A0A0D9VNU0/317-428 DE Uncharacterized protein #=GS A0A0D9VNU0/317-428 DR GENE3D; 2e0df11adc45befe15d5ef2ece4ae056/317-428; #=GS A0A0D9VNU0/317-428 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GS A0A0D9VNU1/343-454 AC A0A0D9VNU1 #=GS A0A0D9VNU1/343-454 OS Leersia perrieri #=GS A0A0D9VNU1/343-454 DE Uncharacterized protein #=GS A0A0D9VNU1/343-454 DR GENE3D; d0ff577f34eeedb479dee50e68c17171/343-454; #=GS A0A0D9VNU1/343-454 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Leersia; Leersia perrieri; #=GF TC 169.7 1.6E-54 #=GF SQ 22 Q8LMR2/330-436 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0E0NNY5/330-436 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0D9VNU2/343-451 ------------YRVLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A1D6JLT9/6-126 WDSRKWQREFESKQVLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPSVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDCIVCTIKDRKELEKHVP------------------------------ A0A1E5VVL6/289-395 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPVVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDCVVSTIKDRKELEKHVP------------------------------ A0A078FQR9/278-384 --------------VLVMTAQILLNILRHSIIRMESINLLILDECHHAVKKHPYSLVMSEFYHTTSKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVP------------------------------ A0A0D9VNU3/333-439 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ M0VIK6/6-126 WDARKWQREFDSKQVLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPVVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A2XBW0/330-436 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0D9VNU4/333-400 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVA--------------------------------------------------------------------- A0A078DM66/280-387 -------------QVLVMTAQILLNILRHSIIRMESINLLILDECHHAVKKHPYSLVMSEFYHTTSKDKRPAIFGMTASPVNLKGVSSQVDCAIKIRNLETKLDSTVCTIKDRKELEKHVP------------------------------ I1P702/329-435 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0D9VNT9/333-439 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ M0VIK8/6-126 WDARKWQREFDSKQVLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPVVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0D9Z1C5/330-436 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0E0GB96/330-436 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0D3FD50/329-435 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ Q6V8T4/1-70 ----------DTKQVLVMTAQILLNILRHSIIKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPSVFGMTASP----------------------------------------------------------------------- I1HAD8/333-439 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKDKRPVVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0E0CUD0/333-439 --------------VLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNLKGVTSQEDCAIKIRNLESKLDSVVCTIKDRKELEKHVP------------------------------ A0A0D9VNU0/317-428 ------------YRVLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNL---------------------------KDRKELEKHVPMPSEVVVQYDKAATLWSLHEQIKQMEGTVE A0A0D9VNU1/343-454 ------------YRVLVMTAQILLNILRHSIIKMDAIHLLILDECHHAVKKHPYSLVMSEFYHTTPKEKRPAVFGMTASPVNL---------------------------KDRKELEKHVPMPSEVVVQYDKAATLWSLHEQIKQMEGTVE #=GC scorecons 0000000000000199999999999999999989789799999999999999999999999999989799968999999976533323323333333333233322323355555555555000000000000000000000000000000 #=GC scorecons_70 ______________*********************************************************_*********______________________________________________________________________ #=GC scorecons_80 ______________*********************************************************_********_______________________________________________________________________ #=GC scorecons_90 ______________********************_**_*****************************_***_********_______________________________________________________________________ //