# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/423582
#=GF DE Transcription-repair-coupling factor
#=GF AC 3.40.50.300/FF/423582
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 8.266
#=GS O51568/458-461_761-967      AC O51568
#=GS O51568/458-461_761-967      OS Borrelia burgdorferi B31
#=GS O51568/458-461_761-967      DE Transcription-repair-coupling factor
#=GS O51568/458-461_761-967      DR GENE3D; 72f9642650098ce2f760412ebb602496/458-461_761-967; 
#=GS O51568/458-461_761-967      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella burgdorferi; 
#=GS D6RYA8/458-461_761-967      AC D6RYA8
#=GS D6RYA8/458-461_761-967      OS Borreliella valaisiana VS116
#=GS D6RYA8/458-461_761-967      DE Transcription-repair-coupling factor
#=GS D6RYA8/458-461_761-967      DR GENE3D; 087dcd65564d731f1f803283a653327f/458-461_761-967; 
#=GS D6RYA8/458-461_761-967      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella valaisiana; 
#=GS C0AM97/459-461_761-967      AC C0AM97
#=GS C0AM97/459-461_761-967      OS Borreliella finlandensis
#=GS C0AM97/459-461_761-967      DE Transcription-repair-coupling factor
#=GS C0AM97/459-461_761-967      DR GENE3D; 12aab5f07e0169f8ac5ff2700f3f4443/459-461_761-967; 
#=GS C0AM97/459-461_761-967      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella finlandensis; 
#=GS G0AM64/458-461_761-967      AC G0AM64
#=GS G0AM64/458-461_761-967      OS Borreliella bissettii DN127
#=GS G0AM64/458-461_761-967      DE Transcription-repair-coupling factor
#=GS G0AM64/458-461_761-967      DR GENE3D; 2ab6881633dfd9ff514e08dd2be96a75/458-461_761-967; 
#=GS G0AM64/458-461_761-967      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella bissettii; 
#=GS Q660P9/458-461_761-967      AC Q660P9
#=GS Q660P9/458-461_761-967      OS Borreliella bavariensis PBi
#=GS Q660P9/458-461_761-967      DE Transcription-repair-coupling factor
#=GS Q660P9/458-461_761-967      DR GENE3D; 6bf8ad9b06b2c934333982b45fab6e43/458-461_761-967; 
#=GS Q660P9/458-461_761-967      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella bavariensis; 
#=GS A0A0H3C3Y8/458-461_761-967  AC A0A0H3C3Y8
#=GS A0A0H3C3Y8/458-461_761-967  OS Borrelia burgdorferi ZS7
#=GS A0A0H3C3Y8/458-461_761-967  DE Transcription-repair-coupling factor
#=GS A0A0H3C3Y8/458-461_761-967  DR GENE3D; 8792de45ae7fc5488dde5169b7d74c7c/458-461_761-967; 
#=GS A0A0H3C3Y8/458-461_761-967  DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella burgdorferi; 
#=GS A0A0E1U7N0/458-461_761-967  AC A0A0E1U7N0
#=GS A0A0E1U7N0/458-461_761-967  OS Borrelia burgdorferi 64b
#=GS A0A0E1U7N0/458-461_761-967  DE Transcription-repair-coupling factor
#=GS A0A0E1U7N0/458-461_761-967  DR GENE3D; bb0602272aeb1bc747239fcbd3608272/458-461_761-967; 
#=GS A0A0E1U7N0/458-461_761-967  DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella burgdorferi; 
#=GS B7XS14/458-461_761-967      AC B7XS14
#=GS B7XS14/458-461_761-967      OS Borrelia garinii PBr
#=GS B7XS14/458-461_761-967      DE Transcription-repair-coupling factor
#=GS B7XS14/458-461_761-967      DR GENE3D; 5a6a1c8fe339bf36ec8220be8240d3ce/458-461_761-967; 
#=GS B7XS14/458-461_761-967      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella garinii; 
#=GS B9X7Q4/458-461_761-967      AC B9X7Q4
#=GS B9X7Q4/458-461_761-967      OS Borreliella spielmanii A14S
#=GS B9X7Q4/458-461_761-967      DE Transcription-repair-coupling factor
#=GS B9X7Q4/458-461_761-967      DR GENE3D; bfca2bf855f73879f3bd99ad34675060/458-461_761-967; 
#=GS B9X7Q4/458-461_761-967      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella spielmanii; 
#=GS Q0SMN2/458-461_761-967      AC Q0SMN2
#=GS Q0SMN2/458-461_761-967      OS Borrelia afzelii PKo
#=GS Q0SMN2/458-461_761-967      DE Transcription-repair-coupling factor
#=GS Q0SMN2/458-461_761-967      DR GENE3D; 96e563236ab8550e81e5f8d1a1126bd6/458-461_761-967; 
#=GS Q0SMN2/458-461_761-967      DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Borreliaceae; Borreliella; Borreliella afzelii; 
#=GF TC 474.8 1.6E-146
#=GF SQ 10
O51568/458-461_761-967              EIEKPPQNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELYYLKTLIERLTPYARIAIIHGKLTGEEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSQKAYAYFLYQDSEKLNERSIERLRAITEFSELGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEK
D6RYA8/458-461_761-967              EIEKPPKNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELHYLKTLIEKLTPYARIAIIHGKLTGDEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQDSEKLNERSIERLRAITEFSDLGSGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDCYLTMLNKAIEK
C0AM97/459-461_761-967              -IEKPPQNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELYYLKTLIEKLTPYARIAIIHGKLTGEEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSQKAYAYFLYQDSEKLNERSIERLRAITEFSELGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEK
G0AM64/458-461_761-967              EIEKPPKNRVKIETYLESFSELLIKHAIESELSRDGQVFLVNHNIEELHYLKTLIEKLTPYARIAIIHGKLTGDEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQDSEKLNECSIERLRAITEFSDLGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEK
Q660P9/458-461_761-967              EIEKPPKNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELHYLKTLIEKLTPYARIAIIHGKLTGDEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQDSEKLNERSIERLRAITEFSDLGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDCYLTMLNKAIEK
A0A0H3C3Y8/458-461_761-967          EIEKPPQNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELYYLKTLIERLTPYARIAIIHGKLTGEEIENIMHNFIKKAYQILLATTIIENGIDIPNVNTIIINNANKFGLAQLYQLKGRVGRGSQKAYAYFLYQDSEKLNERSIERLRAITEFSELGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEK
A0A0E1U7N0/458-461_761-967          EIEKPPQNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELYYLKTLIERLTPYARIAIIHGKLTGEEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSQKAYAYFLYQDSEKLNERSIERLRAITEFSELGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEK
B7XS14/458-461_761-967              EIEKPPKNRVKIEAYLESFSELLIKHAIESELSRDGQVFLVNHNIEELHYLKTLIEKLTPYARIAIIHGKLTGDEIENIMHNFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQDSEKLNESSIERLRAITEFSDLGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDCYLTMLNKAIEK
B9X7Q4/458-461_761-967              EIEKPPKNRIKIEAYLESFSELLIKHAIENELSRDGQVFLVNHNIEELYYLKTLIEKLTPYARIAIIHGKLTGIEIENIMHDFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQDSEKLNERSIERLRAITEFSDLGAGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEK
Q0SMN2/458-461_761-967              EIEKPPKNRVKIEAYLESFSELLIKHAIENELSRDGQVFLVNHNIEELHYLKTLIEKLTPYARIAIIHGKLTGIEIENIMHDFIKKAYQILLATTIIENGIDIPNANTIIINNANKFGLAQLYQLKGRVGRGSKKAYAYFLYQDSEKLNERSIERLRAITEFSDLGSGFKIAMKDMEIRGVGNLLGREQHGEIESIGLDYYLTMLNKAIEK
#=GC scorecons                      7999996998999899999999999999969999999999999999996999999979999999999999999499999997999999999999999999999997999999999999999999999999999699999999999999996999999999999799699999999999999999999999999999999699999999999
#=GC scorecons_70                   *************************************************************************_*****************************************************************************************************************************************
#=GC scorecons_80                   _*****_**********************_******************_************************_*******_***************************************************_****************_************_**_********************************_***********
#=GC scorecons_90                   _*****_******_***************_******************_*******_****************_*******_***********************_***************************_****************_************_**_********************************_***********
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