# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/416284
#=GF DE RecA protein
#=GF AC 3.40.50.300/FF/416284
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 73.897
#=GS Q0FH22/1-136      AC Q0FH22
#=GS Q0FH22/1-136      OS Pelagibaca bermudensis HTCC2601
#=GS Q0FH22/1-136      DE Recombinase A
#=GS Q0FH22/1-136      DR GENE3D; 83af97af338821fa1428a50cea2e0a4a/1-136; 
#=GS Q0FH22/1-136      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca; Pelagibaca bermudensis; 
#=GS W7VX91/1-143      AC W7VX91
#=GS W7VX91/1-143      OS Micromonospora sp. M42
#=GS W7VX91/1-143      DE Protein RecA
#=GS W7VX91/1-143      DR GENE3D; 1210463eac0d18ccabca76c31a983175/1-143; 
#=GS W7VX91/1-143      DR ORG; Bacteria; Actinobacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora; Micromonospora sp. M42; 
#=GS A0A0U3BGA7/1-156  AC A0A0U3BGA7
#=GS A0A0U3BGA7/1-156  OS Novosphingobium pokkalii
#=GS A0A0U3BGA7/1-156  DE RecA
#=GS A0A0U3BGA7/1-156  DR GENE3D; 1bdd6f96b0c36f692fd0c9f64972345f/1-156; 
#=GS A0A0U3BGA7/1-156  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium; Novosphingobium pokkalii; 
#=GS A0A088C828/1-157  AC A0A088C828
#=GS A0A088C828/1-157  OS Clostridium neonatale
#=GS A0A088C828/1-157  DE RecA protein
#=GS A0A088C828/1-157  DR GENE3D; 351cd38bbd2494e1ac1c4c5ddc718a8c/1-157; 
#=GS A0A088C828/1-157  DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium neonatale; 
#=GS Q70WB3/1-152      AC Q70WB3
#=GS Q70WB3/1-152      OS Komagataeibacter xylinus
#=GS Q70WB3/1-152      DE Recombinase A
#=GS Q70WB3/1-152      DR GENE3D; 4cf2d08787a9e6e5bb997bdc46e34ae6/1-152; 
#=GS Q70WB3/1-152      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter; Komagataeibacter xylinus; 
#=GS I1TFF0/1-156      AC I1TFF0
#=GS I1TFF0/1-156      OS Sphingobium sp. 005
#=GS I1TFF0/1-156      DE Recombinase A
#=GS I1TFF0/1-156      DR GENE3D; 55de6647da5d04a83423983ab271f6ae/1-156; 
#=GS I1TFF0/1-156      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium; Sphingobium sp. 005; 
#=GS Q70WA5/1-152      AC Q70WA5
#=GS Q70WA5/1-152      OS Acetobacter pomorum
#=GS Q70WA5/1-152      DE Recombinase A
#=GS Q70WA5/1-152      DR GENE3D; 56ed4f9c53491d17d7a46e9a74788f23/1-152; 
#=GS Q70WA5/1-152      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter pomorum; 
#=GS I1TFH3/1-156      AC I1TFH3
#=GS I1TFH3/1-156      OS Sphingomonas sp. 277
#=GS I1TFH3/1-156      DE Recombinase A
#=GS I1TFH3/1-156      DR GENE3D; 56f182298ed854963e9e408eee70d03b/1-156; 
#=GS I1TFH3/1-156      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas sp. 277; 
#=GS I1TFF4/1-156      AC I1TFF4
#=GS I1TFF4/1-156      OS Sphingomonas sp. 038
#=GS I1TFF4/1-156      DE Recombinase A
#=GS I1TFF4/1-156      DR GENE3D; 5a26bcb28d7db817ce37f03674c00bd4/1-156; 
#=GS I1TFF4/1-156      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas sp. 038; 
#=GS A0A1J5PXW4/1-139  AC A0A1J5PXW4
#=GS A0A1J5PXW4/1-139  OS mine drainage metagenome
#=GS A0A1J5PXW4/1-139  DE Protein RecA
#=GS A0A1J5PXW4/1-139  DR GENE3D; 5c3d0779b9f187f071f5715d0d507be5/1-139; 
#=GS A0A1J5PXW4/1-139  DR ORG; mine drainage metagenome; 
#=GS Q4ECD9/1-154      AC Q4ECD9
#=GS Q4ECD9/1-154      OS Wolbachia endosymbiont of Drosophila ananassae
#=GS Q4ECD9/1-154      DE RecA protein
#=GS Q4ECD9/1-154      DR GENE3D; 85983d1bf084ef76a43da5c3963cde7c/1-154; 
#=GS Q4ECD9/1-154      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Anaplasmataceae; Wolbachieae; Wolbachia; Wolbachia endosymbiont of Drosophila ananassae; 
#=GS A0A0T7R3W6/1-137  AC A0A0T7R3W6
#=GS A0A0T7R3W6/1-137  OS Bordetella pertussis
#=GS A0A0T7R3W6/1-137  DE Recombinase A
#=GS A0A0T7R3W6/1-137  DR GENE3D; 95c3c27781476d0953ebcfe3d9ef366a/1-137; 
#=GS A0A0T7R3W6/1-137  DR ORG; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella; Bordetella pertussis; 
#=GS Q6Y3G0/1-133      AC Q6Y3G0
#=GS Q6Y3G0/1-133      OS Geobacter grbiciae
#=GS Q6Y3G0/1-133      DE RecA
#=GS Q6Y3G0/1-133      DR GENE3D; ae0af8e88093994b63f05300258cf469/1-133; 
#=GS Q6Y3G0/1-133      DR ORG; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter; Geobacter grbiciae; 
#=GS I1TFG4/1-156      AC I1TFG4
#=GS I1TFG4/1-156      OS Sphingomonas sp. 679
#=GS I1TFG4/1-156      DE Recombinase A
#=GS I1TFG4/1-156      DR GENE3D; bd187362aa28b6f427922109bfe6c003/1-156; 
#=GS I1TFG4/1-156      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas sp. 679; 
#=GS Q08784/1-182      AC Q08784
#=GS Q08784/1-182      OS Acetobacter aceti
#=GS Q08784/1-182      DE Protein RecA
#=GS Q08784/1-182      DR GENE3D; e806eae49f3227cf33d7aa838bebdfbb/1-182; 
#=GS Q08784/1-182      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; Acetobacter subgen. Acetobacter; Acetobacter aceti; 
#=GS I1TFH0/2-156      AC I1TFH0
#=GS I1TFH0/2-156      OS Sphingomonas sp. 201
#=GS I1TFH0/2-156      DE Recombinase A
#=GS I1TFH0/2-156      DR GENE3D; eeb1e04d7b9d181ac9d8a5e05fbb7138/2-156; 
#=GS I1TFH0/2-156      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas; Sphingomonas sp. 201; 
#=GS A0A0F9CNA6/1-124  AC A0A0F9CNA6
#=GS A0A0F9CNA6/1-124  OS marine sediment metagenome
#=GS A0A0F9CNA6/1-124  DE Uncharacterized protein
#=GS A0A0F9CNA6/1-124  DR GENE3D; e26bb9cdbf9a65e5d8043986d37fe386/1-124; 
#=GS A0A0F9CNA6/1-124  DR ORG; marine sediment metagenome; 
#=GS B2Z7V5/1-158      AC B2Z7V5
#=GS B2Z7V5/1-158      OS Clostridium perfringens
#=GS B2Z7V5/1-158      DE Recombinase
#=GS B2Z7V5/1-158      DR GENE3D; fedcb737d08401cf3f70722345c3f08c/1-158; 
#=GS B2Z7V5/1-158      DR ORG; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium perfringens; 
#=GF TC 274.8 1.0E-85
#=GF SQ 18
Q0FH22/1-136              -------------------------------MRSGAVSLVVVDSVAALTPKSELEGDMGDSNVGVQARLMSQAMRKLTGSISRSNCMVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKDRDEVVGNQTRVKVVKNKVAPPFKQVEFDIMYGEGI--------------------------
W7VX91/1-143              ------------------------MEIADMLVRSGAIDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGVLNNTGTTAIFINQLREKIGVMFGSPETTTGGRALKFYASVRLDVRRIESLKDGTDVVGNRTRVKVVKNKVAAPFKQAEFDIMYGKGI--------------------------
A0A0U3BGA7/1-156          VYAKKLGVNIDELIVSQPDTGEQALEIVDTLVRSNAIDILVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSRCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDRDEITGNTTRVKVVKNKVAPPFKQ-------------------------------------
A0A088C828/1-157          ------------LIVSQPDTGEQGLEIAEALVRSGAIDVIVVDSVAALVPKAEIEGEMGDSHIGLQARLMSQALRKLAGTINKTNCVAIFINQLREKVGVMFGSPETTTGGRALKFYASVRLDIRRIDSIKQGDAIIGNRTRVKITKNKVAPPFKQAEFDIMYNEGISR------------------------
Q70WB3/1-152              -------------------------------VRSGAIDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGSVSRSNTMLIFLNQIRLKIGVMFGSPETTTGGNALNFYASVRMDIRRIGSIKDKDKVTGNQTRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGIV----------
I1TFF0/1-156              -----------------------------TLVRSNAIDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSKCMVIFINQVRMKIGVMYGNPETTTGGNALKFYASVRLDIRRTGQIKDRDDIVGNATKVKVVKNKVAPPFKQVEFDIMYGEGISKIRRMLDIGVKAGLVEK--------
Q70WA5/1-152              -------------------------------VRSGAVDVLVVDSVAALVPRAELEGNMGDSHVGLHARLMSQALRKLTGTVARSNTLMIFLNQIRLKIGVMFGNPETTTGGNALKFYSSVRMDIRRIGSIKDKDEVTGNQTRVKVVKNKMAPPFRQVEFDIMLREGISKVGELIDLGVKAGVV----------
I1TFH3/1-156              -----------------------------TLVRSGAVDVLIIDSVAALVPRAELEGEMGDALPGLQARLMSQALRKLTASINKSNTMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIKERDEVVGNSTRVKVVKNKLAPPFKQVEFDIMYGEGVSKLGEILDLGVKAGIVEK--------
I1TFF4/1-156              -----------------------------TLVRSNAVDVLVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKITGSISRSKCLVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRIGAIKDRDEVVGNATRVKVVKNKVAPPFKQVEFDIMYGEGVSKMGELVDLGVKAGFVEK--------
A0A1J5PXW4/1-139          -----------------------------MLVRSGSVDVVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGNIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKKGDEVVGSETRVKVVKNKVAPPFKQAEFDILYGEGIS-------------------------
Q4ECD9/1-154              -------------MISQPDTGEQALHIVEYLVCSGAVDVIVIDSVAALTPRAEIEGDMGDQHMGLQARLLSHGLRKLTSAVSKANCILIFINQIRMKIGVVYGNPETTTGGNALKFYTSVRLDIRKIGVIKDKENITGNETRVKVVKNKVAPPFREAKFDIMYNEGI--------------------------
A0A0T7R3W6/1-137          -------------------------------MRSGSVDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKRTNCMVIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKKGDEVVGNETRVKVVKNKVAPPFKQAEFDIMYGSGIS-------------------------
Q6Y3G0/1-133              -------------------------------ALSGAVDVLVIDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGIISKSNCCVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRKIATLKQGDAVVGSRTKVKVVKNKVAPPFKEVEFDIHYG-----------------------------
I1TFG4/1-156              -----------------------------TLVRSNAVDIIVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGSISRSNCMVIFINQIRMKIGVMYGSPETTTGGNALKFYASVRLDIRRTGQIKAGEDIVGNTTRVKVVKNKVAPPFKQVEFDIMYGEGISKTGELLDLGVKAGLVEK--------
Q08784/1-182              ---------VDNLLISQPDAGEQALEIADTLVRSGAVDVLVVDSVAALVPRAELEGDMGDSHVGLHARLMSQALRKLTGTVARSNTLMIFLNQIRLKIGVMFGNPETTTGGNALKFYSSVRMDIRRIGSIKDKDEVTGNQTRVKVVKNKMAPPFRQVEFDIMYGEGISKVGELIDLGVKAGVVEKSGAWFS--
I1TFH0/2-156              ------------------------------RCAPATVDIVVVDSVAALTPRAEIEGEMGDSLPGLQARLMSQALRKLTASISKSKCIVLFINQIRHKIGVMYGSPETTTGGNALKFYASVRLDIRRTGAIKNRDEVVGNTTRVKVVKNKVAPPFREVIFDIMYGEGISKLGEVIDLGVKAGVIEK--------
A0A0F9CNA6/1-124          -------------------------------------------SVAALIPKAEIEGEMGDSHMGLQARLMSQAMRKLTGAISKSHTCVIFINQIRMKIGVMFGSPETTTGGNALKFYSSVRLDIRRIGAIKDRDEVVGNQTRVKVVKNKVAPPFKQVEFDIMYGEGI--------------------------
B2Z7V5/1-158              -----------------------------------AYDVLVVDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKLTGTINKSNCVVIFINQLREKVGIMFGNPETTPGGRALKFYASVRMDIRRIDSIKQGDGITGNRTRVKIVKNKVAPPFKQAEFDIMYNEGISKEGNIVDVGVKENIVQKSGAWYSYG
#=GC scorecons            0000000000000000000000000000012446465755767999996978979979997659879998988899886475665546897996949898879699998997998996999798986647955757597398998899979899775677766556632011111111111110100000000
#=GC scorecons_70         _________________________________*_*_*__**********************_****************_*_**____*******_*******_*************_**********_**__*_*_**_****************__*****__*___________________________
#=GC scorecons_80         _____________________________________*__*_******_****_*******__***************__________*****_*_*******_*******_*****_********___**__*_*_**_****************__***________________________________
#=GC scorecons_90         ___________________________________________*****_*_**_**_***___**_**********_*__________**_**_*_*****_*_*******_*****_***_****____*______*__*********_****_______________________________________
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