# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/392190
#=GF DE Replication factor C subunit 4
#=GF AC 3.40.50.300/FF/392190
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 22.628
#=GS P53016/9-176   AC P53016
#=GS P53016/9-176   OS Caenorhabditis elegans
#=GS P53016/9-176   DE Replication factor C subunit 4
#=GS P53016/9-176   DR GENE3D; e7b8d58c0c706406ab1f1c5baa7ac72b/9-176; 
#=GS P53016/9-176   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans; 
#=GS P53016/9-176   DR GO; GO:0005515; GO:0006260; 
#=GS A8XPC1/9-177   AC A8XPC1
#=GS A8XPC1/9-177   OS Caenorhabditis briggsae
#=GS A8XPC1/9-177   DE Protein CBR-RFC-4.1
#=GS A8XPC1/9-177   DR GENE3D; 1b8f4b999c6271f871d28216fad84b5d/9-177; 
#=GS A8XPC1/9-177   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS G0MER9/27-195  AC G0MER9
#=GS G0MER9/27-195  OS Caenorhabditis brenneri
#=GS G0MER9/27-195  DE Putative uncharacterized protein
#=GS G0MER9/27-195  DR GENE3D; 3b57937d2337b963c4492668b362b996/27-195; 
#=GS G0MER9/27-195  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis brenneri; 
#=GS A8WKZ7/9-177   AC A8WKZ7
#=GS A8WKZ7/9-177   OS Caenorhabditis briggsae
#=GS A8WKZ7/9-177   DE Protein CBR-RFC-4.2
#=GS A8WKZ7/9-177   DR GENE3D; 2c25791fdbd9fc5d3ca12f38b9c095aa/9-177; 
#=GS A8WKZ7/9-177   DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis briggsae; 
#=GS E3MCH9/16-190  AC E3MCH9
#=GS E3MCH9/16-190  OS Caenorhabditis remanei
#=GS E3MCH9/16-190  DE CRE-RFC-4 protein
#=GS E3MCH9/16-190  DR GENE3D; 9cd0a73af2f20850a4a44bf585d49987/16-190; 
#=GS E3MCH9/16-190  DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis remanei; 
#=GF TC 359.2 6.7E-112
#=GF SQ 5
P53016/9-176           -NKRPKVLTWTEKYRPKTLDDIAYQDEVVTMLKGALQGRDLPHLLFYGPPGTGKTSAALAFCRQLFPKNIFHDRVLDLNASDERGIAVVRQK--------------IQSFSKSSLGHSHREDVLKLKIIILDEVDAMTREAQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKS
A8XPC1/9-177           SSKKQKVLTWTEKYRPKTLDDIAHQEEVVTMLKGALQGKDLPHLLFYGPPGTGKTSTALAFCRQLFPSSIFRDRVLDLNASDERGISVVRQK--------------IQAFSKTTLGSSNKEDVLRLKIIILDEVDAMTREAQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKS
G0MER9/27-195          DNKKSRVLTWTEKYRPKTLDDIAHQDEVVTMLKGALQGRDLPHLLFYGPPGTGKTSTALAFCHQLFPKSIFHDRVLDLNASDERGISVVRQK--------------VQAFSKTSLGSGGKEDVLKLKIIILDEVDAMTREAQSAMRRVIEDYSKTTRFILICNYVSRLIPPVVSRCAKFRFKS
A8WKZ7/9-177           SSKKQKVLTWTEKYRPKTLDDIAHQEEVVTMLKGALQGKDLPHLLFYGPPGTGKTSTALAFCRQLFPSSIFRDRVLDLNASDERGISVVRQK--------------IQAFSKTTLGSSNKEDVLRLKIIILDEVDAMTREAQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKS
E3MCH9/16-190          --------TWTEKYRPKTLDDIAHQDEVVTMLKGALQGKDLPHLLFYGPPGTGKTSTALAFCRQLFPRNIFQDRVLDLNASDERGISVVRQKVSRFIVLLSNHSLQIQSFSKTTLSTNCKEDVLKLKIIILDEVDAMTREAQAAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKS
#=GC scorecons         023212339999999999999997979999999999996999999999999999997999997999945995999999999999996999990000000000000079599965954437999979999999999999999969999999979999999999999999999999999999999
#=GC scorecons_70      ________***********************************************************__**_********************______________**_****_*____****************************************************************
#=GC scorecons_80      ________*****************_************_*****************_*****_****__**_**************_*****______________**_***__*____*****_*****************_****************************************
#=GC scorecons_90      ________***************_*_************_*****************_*****_****__**_**************_*****_______________*_***__*_____****_*****************_********_*******************************
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