# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/385683
#=GF DE Fis family transcriptional regulator
#=GF AC 3.40.50.300/FF/385683
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 27.096
#=GS A0A010SH92/128-313  AC A0A010SH92
#=GS A0A010SH92/128-313  OS Pseudomonas fluorescens HK44
#=GS A0A010SH92/128-313  DE Fis family transcriptional regulator
#=GS A0A010SH92/128-313  DR GENE3D; 0760afafe45a90e0b0ae79a9333ba0a3/128-313; 
#=GS A0A010SH92/128-313  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS I4MZN9/128-314      AC I4MZN9
#=GS I4MZN9/128-314      OS Pseudomonas sp. M47T1
#=GS I4MZN9/128-314      DE Fis family transcriptional regulator
#=GS I4MZN9/128-314      DR GENE3D; 277f638fb1d04dd0e52b3b50a6991581/128-314; 
#=GS I4MZN9/128-314      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. M47T1; 
#=GS A0A0N0E658/129-314  AC A0A0N0E658
#=GS A0A0N0E658/129-314  OS Pseudomonas fuscovaginae
#=GS A0A0N0E658/129-314  DE Bacterial regulatory protein
#=GS A0A0N0E658/129-314  DR GENE3D; 299c7483a3a40264dc335bacf5303089/129-314; 
#=GS A0A0N0E658/129-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas fuscovaginae; 
#=GS A0A0C2HX35/129-314  AC A0A0C2HX35
#=GS A0A0C2HX35/129-314  OS Pseudomonas batumici
#=GS A0A0C2HX35/129-314  DE Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake
#=GS A0A0C2HX35/129-314  DR GENE3D; 59a3c9e693af4b7522acba683792ff13/129-314; 
#=GS A0A0C2HX35/129-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas batumici; 
#=GS S6IP99/128-313      AC S6IP99
#=GS S6IP99/128-313      OS Pseudomonas sp. CF161
#=GS S6IP99/128-313      DE Sigma-54 dependent DNA-binding response regulator
#=GS S6IP99/128-313      DR GENE3D; ad84adafb87477ec27078caa39c17012/128-313; 
#=GS S6IP99/128-313      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. CF161; 
#=GS A0A0W0P9T0/135-313  AC A0A0W0P9T0
#=GS A0A0W0P9T0/135-313  OS Pseudomonas fluorescens ABAC62
#=GS A0A0W0P9T0/135-313  DE Fis family transcriptional regulator
#=GS A0A0W0P9T0/135-313  DR GENE3D; e8b59a0f55019871cf5a06010bbd9e49/135-313; 
#=GS A0A0W0P9T0/135-313  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS C3KAM0/134-313      AC C3KAM0
#=GS C3KAM0/134-313      OS Pseudomonas fluorescens SBW25
#=GS C3KAM0/134-313      DE Putative two-component system, response regulator
#=GS C3KAM0/134-313      DR GENE3D; 0e3c31de3eaf30bd11d5ee1eaa52d831/134-313; 
#=GS C3KAM0/134-313      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS A0A177X410/134-313  AC A0A177X410
#=GS A0A177X410/134-313  OS Pseudomonas marginalis
#=GS A0A177X410/134-313  DE Fis family transcriptional regulator
#=GS A0A177X410/134-313  DR GENE3D; 0e3c31de3eaf30bd11d5ee1eaa52d831/134-313; 
#=GS A0A177X410/134-313  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas marginalis; 
#=GS K0WX27/128-314      AC K0WX27
#=GS K0WX27/128-314      OS Pseudomonas fluorescens R124
#=GS K0WX27/128-314      DE Response regulator
#=GS K0WX27/128-314      DR GENE3D; 0f7f2a4818e46289f80011ab91da80e0/128-314; 
#=GS K0WX27/128-314      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS A0A176VDK0/134-314  AC A0A176VDK0
#=GS A0A176VDK0/134-314  OS Pseudomonas brenneri
#=GS A0A176VDK0/134-314  DE Sigma-54-dependent Fis family transcriptional regulator
#=GS A0A176VDK0/134-314  DR GENE3D; 5305594f62157f91d06b95e845ac64c1/134-314; 
#=GS A0A176VDK0/134-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas brenneri; 
#=GS A0A0S4HY94/128-314  AC A0A0S4HY94
#=GS A0A0S4HY94/128-314  OS Pseudomonas sp. URMO17WK12:I11
#=GS A0A0S4HY94/128-314  DE Transcriptional regulatory protein ZraR
#=GS A0A0S4HY94/128-314  DR GENE3D; 9d2d4d09c01a349c6c0de7682d1e43f8/128-314; 
#=GS A0A0S4HY94/128-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. URMO17WK12:I11; 
#=GS A0A120G8V9/134-314  AC A0A120G8V9
#=GS A0A120G8V9/134-314  OS Pseudomonas fluorescens
#=GS A0A120G8V9/134-314  DE Transcriptional regulatory protein ZraR
#=GS A0A120G8V9/134-314  DR GENE3D; ecad9d0db693a168bfd810a2e53b4b48/134-314; 
#=GS A0A120G8V9/134-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens; 
#=GS A0A1K2B3C9/134-314  AC A0A1K2B3C9
#=GS A0A1K2B3C9/134-314  OS Pseudomonas sp. NFPP02
#=GS A0A1K2B3C9/134-314  DE DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains
#=GS A0A1K2B3C9/134-314  DR GENE3D; ecad9d0db693a168bfd810a2e53b4b48/134-314; 
#=GS A0A1K2B3C9/134-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. NFPP02; 
#=GS A0A0R3CEA0/134-314  AC A0A0R3CEA0
#=GS A0A0R3CEA0/134-314  OS Pseudomonas sp. DSM 28142
#=GS A0A0R3CEA0/134-314  DE Fis family transcriptional regulator
#=GS A0A0R3CEA0/134-314  DR GENE3D; ecad9d0db693a168bfd810a2e53b4b48/134-314; 
#=GS A0A0R3CEA0/134-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. DSM 28142; 
#=GS A0A105T4L6/134-314  AC A0A105T4L6
#=GS A0A105T4L6/134-314  OS Pseudomonas sp. TAD18
#=GS A0A105T4L6/134-314  DE Transcriptional regulatory protein ZraR
#=GS A0A105T4L6/134-314  DR GENE3D; e7c8e85d96a6ccdf85fb0f9e9dabc970/134-314; 
#=GS A0A105T4L6/134-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. TAD18; 
#=GS A0A0X8EUG4/135-314  AC A0A0X8EUG4
#=GS A0A0X8EUG4/135-314  OS Pseudomonas fragi
#=GS A0A0X8EUG4/135-314  DE Fis family transcriptional regulator
#=GS A0A0X8EUG4/135-314  DR GENE3D; cd3c3442ecc2cddfa2365a5099f3408f/135-314; 
#=GS A0A0X8EUG4/135-314  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas chlororaphis group; Pseudomonas fragi; 
#=GS M5QGV4/135-314      AC M5QGV4
#=GS M5QGV4/135-314      OS Pseudomonas sp. Lz4W
#=GS M5QGV4/135-314      DE Fis family transcriptional regulator
#=GS M5QGV4/135-314      DR GENE3D; cd3c3442ecc2cddfa2365a5099f3408f/135-314; 
#=GS M5QGV4/135-314      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas sp. Lz4W; 
#=GS Q4K714/128-313      AC Q4K714
#=GS Q4K714/128-313      OS Pseudomonas protegens Pf-5
#=GS Q4K714/128-313      DE Sigma-54 dependent DNA-binding response regulator
#=GS Q4K714/128-313      DR GENE3D; edebe56f0f5d8f3baa8aef4aaad57ca8/128-313; 
#=GS Q4K714/128-313      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas protegens; 
#=GF TC 400.8 3.8E-124
#=GF SQ 18
A0A010SH92/128-313          QRMRAELEEHQQIDSLVGDSPTFRRVLQAVDSVRESNATILLTGESGTGKEMVARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVTDRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPA-
I4MZN9/128-314              ARMRAELNQHQQFDSLVGESPAFRRVLQAIDSVRESSATILLTGESGTGKEMVARAIHQHGNRADQPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVSDRIGRFQQADKGTLFLDEVGDMPLALQAKILRALQERLIEPVGDTRERKVDVRVIAATHKNLVEAVARKEFREDLYYRLNVFPIPLPAL
A0A0N0E658/129-314          -RMRAELDEHRQIDSLVGDSPTFRRVLQAIDSVRESSATILLTGESGTGKEMVARAIHQHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVSDRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPAL
A0A0C2HX35/129-314          -RMRAELDEHQQIDSLVGDSPTFRRVLQAVDSVRESNATILLTGESGTGKEMVARAIHKHGNRADMPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVSDRVGRFLQADKGTLFLDEIGDMPLALQAKILRALQERIIEPVGDPRERKVDVRVIAATNKNLLQAVADKEFREDLYYRLNVFPIPLPAL
S6IP99/128-313              QRMRAELDEHQQIDSLVGDSPTFRRVLQAVDSVRESSATILLTGESGTGKEMVARAIHKHGNRAGRPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPA-
A0A0W0P9T0/135-313          -------DEHAQFDSLVGDSPAFRTVLQAVDSVRDSSATILLTGESGTGKEMVARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADQGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPA-
C3KAM0/134-313              ------LDEHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEMVARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPA-
A0A177X410/134-313          ------LDEHAQFDSLVGDSPAFRKVLQAVDSVRDSSATILLTGESGTGKEMVARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPA-
K0WX27/128-314              QRMRAELDEHQQIDSLIGDSPSFRSVLQAVDSVRESAATVLLSGESGTGKEMVARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRIGRFQQADKGTLFLDEIGEMPLALQAKILRALQERVIEPVGDTKERKVDVRVIAATNKDLLQAVANKEFREDLYYRLNVFPIPLPAL
A0A176VDK0/134-314          ------LDEHAQFDSLVGESPAFRRVLQAVDSVRESNATILLTGESGTGKEMVARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPAL
A0A0S4HY94/128-314          QRMRAELDEHQQIDSLIGDSPNFRRVLHAIDSVRESNATILLTGESGTGKEMVARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLFLDEIGEMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPAL
A0A120G8V9/134-314          ------LDEHAQFDSLVGDSPAFRQVLQAVDSVRDSNATILLTGESGTGKEMVARAIHKHGSRADQPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVAAKEFREDLYYRLNVFPIPLPSL
A0A1K2B3C9/134-314          ------LDEHAQFDSLVGDSPAFRQVLQAVDSVRDSNATILLTGESGTGKEMVARAIHKHGSRADQPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVAAKEFREDLYYRLNVFPIPLPSL
A0A0R3CEA0/134-314          ------LDEHAQFDSLVGDSPAFRQVLQAVDSVRDSNATILLTGESGTGKEMVARAIHKHGSRADQPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLDAVAAKEFREDLYYRLNVFPIPLPSL
A0A105T4L6/134-314          ------LDQHQPFDNLIGDSPSFRRVLQAIDSVRDSSATILLTGESGTGKEMVARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVTDRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATHKNLLEAVANKEFREDLYYRLNVFPIQLPAL
A0A0X8EUG4/135-314          -------DEHWHIESLIGDSPSFRRVLQAIDSVRDSNATILLTGESGTGKEMVARAIHNHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPAL
M5QGV4/135-314              -------DEHWHIESLIGDSPSFRRVLQAIDSVRDSNATILLTGESGTGKEMVARAIHNHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPAL
Q4K714/128-313              QRMRAELAEHQQIDSLVGDSPAFRRVLQAVDSVRESNATILLTGESGTGKEMVARAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFQQADKGTLFLDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLYYRLNVFPIPLPA-
#=GC scorecons              0111116779475889798995995998979999795998998999999999999999699699869999999999999999999999999999999699899959998999999979899999999999999997999999789999999999997989869996999999999999999989974
#=GC scorecons_70           _______***_*_********_**_***********_************************_***_**************************************_************************************************************_********************_
#=GC scorecons_80           _______***_*_********_**_*********_*_*********************_**_***_*******************************_******_********************************************************_***_********************_
#=GC scorecons_90           _________*___***_****_**_****_****_*_*********************_**_***_*******************************_**_***_***********_******************_******_*************_****_***_*******************__
//