# STOCKHOLM 1.0 #=GF ID 3.40.50.300/FF/380628 #=GF DE Genome polyprotein #=GF AC 3.40.50.300/FF/380628 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 27.270 #=GS Q66914/439-610 AC Q66914 #=GS Q66914/439-610 OS Feline calicivirus (strain Urbana) #=GS Q66914/439-610 DE Genome polyprotein #=GS Q66914/439-610 DR GENE3D; 95beae8d31f917df5c3c736774eb09c5/439-610; #=GS Q66914/439-610 DR ORG; Viruses; Caliciviridae; Vesivirus; Feline calicivirus; #=GS Q66914/439-610 DR EC; 2.7.7.48; 3.4.22.66; 3.6.1.15; #=GS P27409/433-598 AC P27409 #=GS P27409/433-598 OS Feline calicivirus strain F9 #=GS P27409/433-598 DE Genome polyprotein #=GS P27409/433-598 DR GENE3D; aace2be129d749a0c48b99d47bf0191a/433-598; #=GS P27409/433-598 DR ORG; Viruses; Caliciviridae; Vesivirus; Feline calicivirus; #=GS P27409/433-598 DR EC; 2.7.7.48; 3.4.22.66; 3.6.1.15; #=GS P27407/428-565 AC P27407 #=GS P27407/428-565 OS Feline calicivirus strain CFI/68 FIV #=GS P27407/428-565 DE Genome polyprotein #=GS P27407/428-565 DR GENE3D; 495c402c4e862216c3f3ffc18c8d6dd1/428-565; #=GS P27407/428-565 DR ORG; Viruses; Caliciviridae; Vesivirus; Feline calicivirus; #=GS P27407/428-565 DR EC; 2.7.7.48; 3.4.22.66; 3.6.1.15; #=GS P27408/429-599 AC P27408 #=GS P27408/429-599 OS Feline calicivirus strain Japanese F4 #=GS P27408/429-599 DE Genome polyprotein #=GS P27408/429-599 DR GENE3D; 85967efbd95dcf33a0ea5bbffffab880/429-599; #=GS P27408/429-599 DR ORG; Viruses; Caliciviridae; Vesivirus; Feline calicivirus; #=GS P27408/429-599 DR EC; 2.7.7.48; 3.4.22.66; 3.6.1.15; #=GS D2KI48/429-586 AC D2KI48 #=GS D2KI48/429-586 OS Feline calicivirus #=GS D2KI48/429-586 DE Non-structural polyprotein #=GS D2KI48/429-586 DR GENE3D; 263340a62758aa89a504a50edd88482e/429-586; #=GS D2KI48/429-586 DR ORG; Viruses; Caliciviridae; Vesivirus; Feline calicivirus; #=GF TC 324.0 4.6E-101 #=GF SQ 5 Q66914/439-610 -----------LNPIMQSYNPILRNLMSTLDGVITSCNKRKAIAKKRPVPVCYILTGPPGCGKTTAALALAKKLSDQEPSVINLDVDHHDTYTGNEVCIVDEFDSSDKVDYANFVIGMVNSAPMVLNCDMLENKGKLFTSKYIIMTSNSETPVKPSSRRAGAFYRRVTIIDVANPLAESHKRA P27409/433-598 -----EIKIHTLNPIMQSYNPILRNLMSTLDGVITSCNKRKAIARKRQVPVCYILTGPPGCGKTTAAQALAKKLSDQEPSVINLDVDHHDTYTGNEVCIIDEFDSSDKVDYANFVIGMVNSAPMVLNCDMLENKGKLFTSKYIIMTSNSETPVKPSSKRAGAFYRRVTIID------------ P27407/428-565 KILHEEIKVHTLNPIMQSYNLILRNLMSTLDGVITCCNKRKAIARKRQVPVCYILTGPPGCGKTTAAQALAKKLSDQEPSVINLDVDHHDTYTGNEVCIIDEFDSSDKVDYANFVIGMVNSAPMVLNCDMLENKGKLF--------------------------------------------- P27408/429-599 -ILHEEIKVHTLNPIMQSYNPILRNLMSTLDGVITSCNKRKAIARKRQVPVCYILTGPPGCGKTTAAQALAKKLSDQEPSVINLDVDHHDTYTGNEVCIIDEFDSSDKVDYANFVIGMVNSAPMVLNCDMLENKGKLFTSKYIIMTSNSETPVKPSSKRAGAFYRRVTIIDV----------- D2KI48/429-586 -ILHEEIKVYTLNPIMQSYNPILRNLMSTLDGVITSCNKRKAVARKRQVPVCYILTGPPGCGKTTAAHALAKKLSDQDPSIINLDVDHHDTYTGNEVCIVDEFDSSDKVDYANFVIGMVNSAPMILNCDMLENKGKLFTSKYIIMTSNSETPVKPSSKR------------------------ #=GC scorecons 022224443349999999995999999999999996999999797996999999999999999999949999999997997999999999999999999699999999999999999999999979999999999999444444444444444444434222222222222000000000000 #=GC scorecons_70 ___________*********_**************_***********_*******************_**********************************************************************_____________________________________________ #=GC scorecons_80 ___________*********_**************_***********_*******************_*******************************_**************************************_____________________________________________ #=GC scorecons_90 ___________*********_**************_******_*_**_*******************_*********_**_******************_************************_*************_____________________________________________ //