# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/366888
#=GF DE Origin of replication complex subunit 1A
#=GF AC 3.40.50.300/FF/366888
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 17.525
#=GS Q9SU24/419-619      AC Q9SU24
#=GS Q9SU24/419-619      OS Arabidopsis thaliana
#=GS Q9SU24/419-619      DE Origin of replication complex subunit 1B
#=GS Q9SU24/419-619      DR GENE3D; 910e11c71f610653a8f8442fa77ad3bc/419-619; 
#=GS Q9SU24/419-619      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9SU24/419-619      DR GO; GO:0000808; GO:0005515; GO:0006260; GO:0006355; GO:0009567; GO:0010385; 
#=GS Q710E8/414-614      AC Q710E8
#=GS Q710E8/414-614      OS Arabidopsis thaliana
#=GS Q710E8/414-614      DE Origin of replication complex subunit 1A
#=GS Q710E8/414-614      DR GENE3D; 8293053b37e4a9e20785d6430ef9c3f8/414-614; 
#=GS Q710E8/414-614      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q710E8/414-614      DR GO; GO:0000808; GO:0005515; GO:0006260; GO:0006355; GO:0010385; 
#=GS A0A178UTR9/419-619  AC A0A178UTR9
#=GS A0A178UTR9/419-619  OS Arabidopsis thaliana
#=GS A0A178UTR9/419-619  DE UNE13
#=GS A0A178UTR9/419-619  DR GENE3D; 910e11c71f610653a8f8442fa77ad3bc/419-619; 
#=GS A0A178UTR9/419-619  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS M4EL04/419-618      AC M4EL04
#=GS M4EL04/419-618      OS Brassica rapa subsp. pekinensis
#=GS M4EL04/419-618      DE Uncharacterized protein
#=GS M4EL04/419-618      DR GENE3D; 1056fc57d8a506845cdbdeebd063b6e5/419-618; 
#=GS M4EL04/419-618      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A078J711/422-621  AC A0A078J711
#=GS A0A078J711/422-621  OS Brassica napus
#=GS A0A078J711/422-621  DE BnaCnng40110D protein
#=GS A0A078J711/422-621  DR GENE3D; 52c63220bab21c362b6dc73eeb2713b1/422-621; 
#=GS A0A078J711/422-621  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS A0A0D3E8D0/422-621  AC A0A0D3E8D0
#=GS A0A0D3E8D0/422-621  OS Brassica oleracea var. oleracea
#=GS A0A0D3E8D0/422-621  DE Uncharacterized protein
#=GS A0A0D3E8D0/422-621  DR GENE3D; 52c63220bab21c362b6dc73eeb2713b1/422-621; 
#=GS A0A0D3E8D0/422-621  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS D7M142/422-621      AC D7M142
#=GS D7M142/422-621      OS Arabidopsis lyrata subsp. lyrata
#=GS D7M142/422-621      DE ATORC1B/ORC1B/UNE13
#=GS D7M142/422-621      DR GENE3D; 5d82564e2f5d69d7cb04772bf0f4e736/422-621; 
#=GS D7M142/422-621      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS D7MGX5/282-482      AC D7MGX5
#=GS D7MGX5/282-482      OS Arabidopsis lyrata subsp. lyrata
#=GS D7MGX5/282-482      DE Putative uncharacterized protein
#=GS D7MGX5/282-482      DR GENE3D; 7e783109827deb5d392f102b50274754/282-482; 
#=GS D7MGX5/282-482      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS R0FDP1/438-638      AC R0FDP1
#=GS R0FDP1/438-638      OS Capsella rubella
#=GS R0FDP1/438-638      DE Uncharacterized protein
#=GS R0FDP1/438-638      DR GENE3D; 859ac76760a5e36cfefb377a19a85e95/438-638; 
#=GS R0FDP1/438-638      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS V4L770/444-644      AC V4L770
#=GS V4L770/444-644      OS Eutrema salsugineum
#=GS V4L770/444-644      DE Uncharacterized protein
#=GS V4L770/444-644      DR GENE3D; 1a759700e87478ab5ff7d44954664e2d/444-644; 
#=GS V4L770/444-644      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A1J3GN99/80-279   AC A0A1J3GN99
#=GS A0A1J3GN99/80-279   OS Noccaea caerulescens
#=GS A0A1J3GN99/80-279   DE Origin of replication complex subunit 1A
#=GS A0A1J3GN99/80-279   DR GENE3D; 57bfa8d91bb3af005fd727655a4ae767/80-279; 
#=GS A0A1J3GN99/80-279   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS A0A1J3IIA3/212-411  AC A0A1J3IIA3
#=GS A0A1J3IIA3/212-411  OS Noccaea caerulescens
#=GS A0A1J3IIA3/212-411  DE Origin of replication complex subunit 1A
#=GS A0A1J3IIA3/212-411  DR GENE3D; 9e70c85a7a053ad710148132faf46b6c/212-411; 
#=GS A0A1J3IIA3/212-411  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; 
#=GS A0A078FV76/415-615  AC A0A078FV76
#=GS A0A078FV76/415-615  OS Brassica napus
#=GS A0A078FV76/415-615  DE BnaA09g20750D protein
#=GS A0A078FV76/415-615  DR GENE3D; d6849db7d9321e2f27e018953998a5d0/415-615; 
#=GS A0A078FV76/415-615  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GF TC 451.8 9.1E-140
#=GF SQ 13
Q9SU24/419-619              KQSELEKAKATLLLATRPKSLPCRSKEMEEITSFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEEGSVSPYCFVEINGLKLASPENIYSVIYEALSGHRVGWKKALQCLNERFAEGKRIGKEDEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLVVLGIANTMDLPEKLLPRISSRMGIQRLCFG
Q710E8/414-614              KQSELEKAKATLLLATRPKSLPCRSKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEAGSVSPYCFVEINGLKLASPENIYSVIYEGLSGHRVGWKKALQSLNERFAEGKKIGKENEKPCILLIDELDVLVTRNQSVLYNILDWPTKPNSKLVVLGIANTMDLPEKLLPRISSRMGIQRLCFG
A0A178UTR9/419-619          KQSELEKAKATLLLATRPKSLPCRSKEMEEITSFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEEGSVSPYCFVEINGLKLASPENIYSVIYEALSGHRVGWKKALQCLNERFAEGKRIGKEDEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLVVLGIANTMDLPEKLLPRISSRMGIQRLCFG
M4EL04/419-618              KQSELEKAKATLLLATRPKSLPCRNKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTVSVLSVMKNLKAEVEAGIVSPYCFVEINGLKLASPEKIYTVIYEALSGHRVGWKKALHSLNERFSEGKRIGKEEEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCF-
A0A078J711/422-621          KQSELEKAKATLLLATRPKSLPCRNKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTVSVLSVMKNLKAEVEAGIVSPYCFVEINGLKLASPEKIYTVIYEALSGHRVGWKKALHSLNERFSEGKRIGKEDEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCF-
A0A0D3E8D0/422-621          KQSELEKAKATLLLATRPKSLPCRNKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTVSVLSVMKNLKAEVEAGIVSPYCFVEINGLKLASPEKIYTVIYEALSGHRVGWKKALHSLNERFSEGKRIGKEDEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCF-
D7M142/422-621              KQTELEKAKATLLLATRPKSLPCRSKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEEGSVSPYCFVEINGLKLASPENIYSVIYEALSGHRVSWKKALQSLNERFAEGKRIGKEDEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLVVLGIANTMDLPEKLLPRISSRMGIQRLCF-
D7MGX5/282-482              KKNELEKAKATLLLATSPKSLPCRSKEMEEITAFIKGSILDDQCLGRCMYIHGVPGTGKTITVLSVMKNLKAEVEAGSVSPYCFVEINGLKLASPENIYSFIYEALSGHRVSWKKALQSLNERFAEGKRIGKENEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSRLVVLGIANTMDLPEKVLPRISSQMGIQRLCFG
R0FDP1/438-638              KQTELEKAKATLLLATRPKSLPCRNREMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEAGNVSPYCFVEINGLKLASPENIYSVIYEALSGHRIGWKKALHSLNERFAEGKKIGKEDDKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCFG
V4L770/444-644              KQTELEKAKATLLLATRPKSLPCRNKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEAGSVNPYCFVEINGLKLASPENIYTVIYEALSGHRVSWKKALHSLNERFAEGKKIGKEDDKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCFG
A0A1J3GN99/80-279           KQTELEKAKATLLLATRPKSLPCRSKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEAGSVSPYCFVEINGLKLASPEHIYTVIYEALSGHRVSWKKALRSLNERFAEGKRIAKEEEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCF-
A0A1J3IIA3/212-411          KQTELEKAKATLLLATRPKSLPCRSKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTISVLSVMKNLKAEVEAGSVSPYCFVEINGLKLASPEHIYTVIYEALSGHRVSWKKALRSLNERFAEGKRIAKEEEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCF-
A0A078FV76/415-615          KQSELEKAKATLLLATRPKSLPCRNKEMEEITAFIKGSISDDQCLGRCMYIHGVPGTGKTVSVLSVMKNLKAEVEAGIVSPYCFVEINGLKLASPEKIYTVIYEALSGHRVGWKKALHSLNERFSEGKRIGKEEEKPCILLIDELDLLVTRNQSVLYNILDWPTKPNSKLIVLGIANTMDLPEKLLPRISSRMGIQRLCFG
#=GC scorecons              975999999999999979999999689999997999999799999999999999999999779999999999999695989999999999999999599679998999998699999679999969997979967999999999998999999999999999999999897999999999999979999997999999992
#=GC scorecons_70           **_*********************_****************************************************_******************_**_***********_*****_***************_******************************************************************_
#=GC scorecons_80           **_*********************_**************************************************_*_******************_**_***********_*****_******_********_************************************_*****************************_
#=GC scorecons_90           *__*************_*******_*******_******_********************__*************_*_******************_**__**********_*****__*****_***_*_**__***********************************_*************_******_********_
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