# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/352811
#=GF DE FTSH protease 12 isoform 2
#=GF AC 3.40.50.300/FF/352811
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 21.889
#=GS B9RHY7/470-652      AC B9RHY7
#=GS B9RHY7/470-652      OS Ricinus communis
#=GS B9RHY7/470-652      DE Cell division protein ftsH, putative
#=GS B9RHY7/470-652      DR GENE3D; be57c4ed465342a45bcfd8008a861fe2/470-652; 
#=GS B9RHY7/470-652      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus; Ricinus communis; 
#=GS B9RHY7/470-652      DR EC; 3.6.4.3; 
#=GS Q9SAJ3/484-667      AC Q9SAJ3
#=GS Q9SAJ3/484-667      OS Arabidopsis thaliana
#=GS Q9SAJ3/484-667      DE ATP-dependent zinc metalloprotease FTSH 12, chloroplastic
#=GS Q9SAJ3/484-667      DR GENE3D; 549d3a3eb8c89266b3944d2bcfe2c128/484-667; 
#=GS Q9SAJ3/484-667      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9SAJ3/484-667      DR GO; GO:0004176; GO:0005739; GO:0009507; GO:0009536; GO:0009941; 
#=GS B9DHQ6/484-667      AC B9DHQ6
#=GS B9DHQ6/484-667      OS Arabidopsis thaliana
#=GS B9DHQ6/484-667      DE AT1G79560 protein
#=GS B9DHQ6/484-667      DR GENE3D; 549d3a3eb8c89266b3944d2bcfe2c128/484-667; 
#=GS B9DHQ6/484-667      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS F6H9V4/485-669      AC F6H9V4
#=GS F6H9V4/485-669      OS Vitis vinifera
#=GS F6H9V4/485-669      DE Putative uncharacterized protein
#=GS F6H9V4/485-669      DR GENE3D; e10b85cbf50ce0d57a07066a0300a4ac/485-669; 
#=GS F6H9V4/485-669      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Vitales; Vitaceae; Vitis; Vitis vinifera; 
#=GS K4B9C4/474-656      AC K4B9C4
#=GS K4B9C4/474-656      OS Solanum lycopersicum
#=GS K4B9C4/474-656      DE Uncharacterized protein
#=GS K4B9C4/474-656      DR GENE3D; fd686eb5fe17187a44fb734d3e9cf118/474-656; 
#=GS K4B9C4/474-656      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Lycopersicon; Solanum lycopersicum; 
#=GS A0A0D2VFD4/467-649  AC A0A0D2VFD4
#=GS A0A0D2VFD4/467-649  OS Gossypium raimondii
#=GS A0A0D2VFD4/467-649  DE Uncharacterized protein
#=GS A0A0D2VFD4/467-649  DR GENE3D; 123746336802829d6e93e9d3507b5d46/467-649; 
#=GS A0A0D2VFD4/467-649  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malvales; Malvaceae; Malvoideae; Gossypium; Gossypium raimondii; 
#=GS V4KBQ2/484-667      AC V4KBQ2
#=GS V4KBQ2/484-667      OS Eutrema salsugineum
#=GS V4KBQ2/484-667      DE Uncharacterized protein
#=GS V4KBQ2/484-667      DR GENE3D; 1fabbb41d060f148d6a62bc1a56b29b5/484-667; 
#=GS V4KBQ2/484-667      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS A0A067FEA0/161-345  AC A0A067FEA0
#=GS A0A067FEA0/161-345  OS Citrus sinensis
#=GS A0A067FEA0/161-345  DE Uncharacterized protein
#=GS A0A067FEA0/161-345  DR GENE3D; 2c5ea51b0374e8fac5592e3e186f504c/161-345; 
#=GS A0A067FEA0/161-345  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Sapindales; Rutaceae; Aurantioideae; Citrus; Citrus sinensis; 
#=GS A0A0D2U1D6/467-649  AC A0A0D2U1D6
#=GS A0A0D2U1D6/467-649  OS Gossypium raimondii
#=GS A0A0D2U1D6/467-649  DE Uncharacterized protein
#=GS A0A0D2U1D6/467-649  DR GENE3D; 469cbae5e02a9063fc319c3a15be28b2/467-649; 
#=GS A0A0D2U1D6/467-649  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malvales; Malvaceae; Malvoideae; Gossypium; Gossypium raimondii; 
#=GS A0A087HJQ4/476-659  AC A0A087HJQ4
#=GS A0A087HJQ4/476-659  OS Arabis alpina
#=GS A0A087HJQ4/476-659  DE Uncharacterized protein
#=GS A0A087HJQ4/476-659  DR GENE3D; 4a451d15db435e063baf5df87f371cd4/476-659; 
#=GS A0A087HJQ4/476-659  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS D7KWJ2/480-663      AC D7KWJ2
#=GS D7KWJ2/480-663      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KWJ2/480-663      DE EMB1047/FTSH12
#=GS D7KWJ2/480-663      DR GENE3D; 54fa3730737cfbb41f3ae9d52e5f2927/480-663; 
#=GS D7KWJ2/480-663      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A067FDL5/161-345  AC A0A067FDL5
#=GS A0A067FDL5/161-345  OS Citrus sinensis
#=GS A0A067FDL5/161-345  DE Uncharacterized protein
#=GS A0A067FDL5/161-345  DR GENE3D; 617953f0b002a95a62e439e7be828e00/161-345; 
#=GS A0A067FDL5/161-345  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Sapindales; Rutaceae; Aurantioideae; Citrus; Citrus sinensis; 
#=GS M4CHC1/484-667      AC M4CHC1
#=GS M4CHC1/484-667      OS Brassica rapa subsp. pekinensis
#=GS M4CHC1/484-667      DE Uncharacterized protein
#=GS M4CHC1/484-667      DR GENE3D; 6e96065c4bc4926e9c846152acb3def3/484-667; 
#=GS M4CHC1/484-667      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A061F9W7/475-657  AC A0A061F9W7
#=GS A0A061F9W7/475-657  OS Theobroma cacao
#=GS A0A061F9W7/475-657  DE FTSH protease 12 isoform 1
#=GS A0A061F9W7/475-657  DR GENE3D; 6e21ad5218f4a90fbaaae81e1084ae5a/475-657; 
#=GS A0A061F9W7/475-657  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malvales; Malvaceae; Byttnerioideae; Theobroma; Theobroma cacao; 
#=GS R0I1D8/477-660      AC R0I1D8
#=GS R0I1D8/477-660      OS Capsella rubella
#=GS R0I1D8/477-660      DE Uncharacterized protein
#=GS R0I1D8/477-660      DR GENE3D; 7fa2c2bb62a5d5881d84d7666daa96c5/477-660; 
#=GS R0I1D8/477-660      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS V7AKM4/452-634      AC V7AKM4
#=GS V7AKM4/452-634      OS Phaseolus vulgaris
#=GS V7AKM4/452-634      DE Uncharacterized protein
#=GS V7AKM4/452-634      DR GENE3D; 9c461022037e928666dc958e92a2aeb1/452-634; 
#=GS V7AKM4/452-634      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus; Phaseolus vulgaris; 
#=GS A0A059BZI5/472-654  AC A0A059BZI5
#=GS A0A059BZI5/472-654  OS Eucalyptus grandis
#=GS A0A059BZI5/472-654  DE Uncharacterized protein
#=GS A0A059BZI5/472-654  DR GENE3D; 9f5c3bf0888fe419e11a001cd3d2870c/472-654; 
#=GS A0A059BZI5/472-654  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Myrtales; Myrtaceae; Myrtoideae; Eucalypteae; Eucalyptus; Eucalyptus grandis; 
#=GS K7L8H2/459-641      AC K7L8H2
#=GS K7L8H2/459-641      OS Glycine max
#=GS K7L8H2/459-641      DE Uncharacterized protein
#=GS K7L8H2/459-641      DR GENE3D; a6e9499736b1477b7b9e22331238ef4e/459-641; 
#=GS K7L8H2/459-641      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Glycine; Soja; Glycine max; 
#=GS A0A0D3CVS8/484-667  AC A0A0D3CVS8
#=GS A0A0D3CVS8/484-667  OS Brassica oleracea var. oleracea
#=GS A0A0D3CVS8/484-667  DE Uncharacterized protein
#=GS A0A0D3CVS8/484-667  DR GENE3D; c3278a73e817753edff6348eb1f8b5cf/484-667; 
#=GS A0A0D3CVS8/484-667  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; 
#=GS V4S575/475-659      AC V4S575
#=GS V4S575/475-659      OS Citrus clementina
#=GS V4S575/475-659      DE Uncharacterized protein
#=GS V4S575/475-659      DR GENE3D; d55a2533f495d8cf003132efddc0026e/475-659; 
#=GS V4S575/475-659      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Sapindales; Rutaceae; Aurantioideae; Citrus; Citrus clementina; 
#=GS A0A067JZU9/478-659  AC A0A067JZU9
#=GS A0A067JZU9/478-659  OS Jatropha curcas
#=GS A0A067JZU9/478-659  DE Uncharacterized protein
#=GS A0A067JZU9/478-659  DR GENE3D; ee32ad0e0bcc707af180a16d2d2f7a7f/478-659; 
#=GS A0A067JZU9/478-659  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha; Jatropha curcas; 
#=GS A0A067F5Y7/161-345  AC A0A067F5Y7
#=GS A0A067F5Y7/161-345  OS Citrus sinensis
#=GS A0A067F5Y7/161-345  DE Uncharacterized protein
#=GS A0A067F5Y7/161-345  DR GENE3D; fcf9a5913af9f1048b1dc144c7ad59d2/161-345; 
#=GS A0A067F5Y7/161-345  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Sapindales; Rutaceae; Aurantioideae; Citrus; Citrus sinensis; 
#=GS A0A061FBQ4/255-437  AC A0A061FBQ4
#=GS A0A061FBQ4/255-437  OS Theobroma cacao
#=GS A0A061FBQ4/255-437  DE FTSH protease 12 isoform 2
#=GS A0A061FBQ4/255-437  DR GENE3D; ff27af6f40f72f71a4a99839e14e9e0d/255-437; 
#=GS A0A061FBQ4/255-437  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Malvales; Malvaceae; Byttnerioideae; Theobroma; Theobroma cacao; 
#=GF TC 404.1 7.2E-125
#=GF SQ 23
B9RHY7/470-652              --VGETKSMYKEVVLGGDVWDLLDEIMIYMGNPMQYYERGVKFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKDKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
Q9SAJ3/484-667              -DVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
B9DHQ6/484-667              -DVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
F6H9V4/485-669              VGDGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVPFVRGVLLSGPPGTGKTLFARTLAKESGMPFVFASGAEFTDSEKSGAARINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRKATFEALIAQLEGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
K4B9C4/474-656              --VGETKSMYKEIVLGGDVWDLLDELMIYMGNPMQYYEKDVKFVRGVLLSGPPGTGKTLFARTLAKESGMPFVFASGAEFTDSEKSGAARINEMFSVARRNAPAFVFIDEIDAIAGRHARKDPRRKATFEALISQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRVYIGLP
A0A0D2VFD4/467-649          --VGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
V4KBQ2/484-667              -DVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERNVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSVARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
A0A067FEA0/161-345          GYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
A0A0D2U1D6/467-649          --VGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
A0A087HJQ4/476-659          -DVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYFEKDVPFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSVARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
D7KWJ2/480-663              -DVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
A0A067FDL5/161-345          GYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
M4CHC1/484-667              -DVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVPFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSVARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
A0A061F9W7/475-657          --VGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
R0I1D8/477-660              -DVSETKSMYKDVVLGGDVWDLLDELMIYMGNPMHYYEKDVAFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
V7AKM4/452-634              --VGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQFYERDVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSERSGASRINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRVSLRQAIIFICATNRPDELDLEFVRPGRIDRRLYIGLP
A0A059BZI5/472-654          --VGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPSFVFVDEVDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
K7L8H2/459-641              --VGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQFYERDVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRVSLRQAIIFICATNRPDELDLEFVRAGRIDRRLYIGLP
A0A0D3CVS8/484-667          -DVSETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKDVPFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAAKINEMFSVARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGIDRFSLRQAVIFICATNRPDELDLEFVRSGRIDRRLYIGLP
V4S575/475-659              GYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
A0A067JZU9/478-659          ---GETKSMHKEVVLGGDVWDLLDEIMIYMGNPMQYYERGVKFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPCFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKDKTGVDRFSLRQAVIFLCATNRPDELDLEFVRPGRIDRRLYIGLP
A0A067F5Y7/161-345          GYVSDTKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYERGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGDKERTGIDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
A0A061FBQ4/255-437          --VGETKSMYKEVVLGGDVWDLLDELMIYMGNPMQYYEKGVQFVRGVLLSGPPGTGKTLFARTLAKESGLPFVFASGAEFTDSEKSGAARINEMFSIARRNAPAFVFVDEIDAIAGRHARKDPRRRATFEALIAQLDGEKEKTGVDRFSLRQAVIFICATNRPDELDLEFVRPGRIDRRLYIGLP
#=GC scorecons              01767999989889999999999998999999998889759499999999999999999999999999989999999999999989998799999979999995999899899999999999999899999998998979879979979999989989999999999999996999999899999
#=GC scorecons_70           __*_***********************************_*_*************************************************************_********************************************************************_************
#=GC scorecons_80           ____**********************************__*_*************************************************************_****************************************_***************************_************
#=GC scorecons_90           _____********************_************__*_***************************_*******************_******_******_**********************************_**_**_**_************************_************
//