# STOCKHOLM 1.0
#=GF ID 3.40.50.300/FF/243580
#=GF DE CRISPR-associated helicase cas3
#=GF AC 3.40.50.300/FF/243580
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 3.818
#=GS P38036/286-499      AC P38036
#=GS P38036/286-499      OS Escherichia coli K-12
#=GS P38036/286-499      DE CRISPR-associated endonuclease/helicase Cas3
#=GS P38036/286-499      DR GENE3D; 82fdcef673701e4a19d8eebbf7a5ad8e/286-499; 
#=GS P38036/286-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS P38036/286-499      DR GO; GO:0000014; GO:0000287; GO:0000737; GO:0000738; GO:0003690; GO:0008296; GO:0033680; GO:0051607; GO:0097098; 
#=GS A0A125WZG5/286-499  AC A0A125WZG5
#=GS A0A125WZG5/286-499  OS Escherichia coli 1-110-08_S3_C1
#=GS A0A125WZG5/286-499  DE CRISPR-associated endonuclease Cas3-HD
#=GS A0A125WZG5/286-499  DR GENE3D; 09975c5d70e1c2cf9562086d081cf6e7/286-499; 
#=GS A0A125WZG5/286-499  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS L3KEK5/286-499      AC L3KEK5
#=GS L3KEK5/286-499      OS Escherichia coli KTE51
#=GS L3KEK5/286-499      DE CRISPR-associated helicase cas3
#=GS L3KEK5/286-499      DR GENE3D; 09975c5d70e1c2cf9562086d081cf6e7/286-499; 
#=GS L3KEK5/286-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A069XF18/286-499  AC A0A069XF18
#=GS A0A069XF18/286-499  OS Escherichia coli 3-373-03_S4_C2
#=GS A0A069XF18/286-499  DE CRISPR-associated endonuclease Cas3-HD
#=GS A0A069XF18/286-499  DR GENE3D; 09975c5d70e1c2cf9562086d081cf6e7/286-499; 
#=GS A0A069XF18/286-499  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A167CUS8/286-499  AC A0A167CUS8
#=GS A0A167CUS8/286-499  OS Escherichia coli
#=GS A0A167CUS8/286-499  DE CRISPR-associated helicase Cas3/CRISPR-associated endonuclease Cas3-HD
#=GS A0A167CUS8/286-499  DR GENE3D; 09975c5d70e1c2cf9562086d081cf6e7/286-499; 
#=GS A0A167CUS8/286-499  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS N4N4N6/287-499      AC N4N4N6
#=GS N4N4N6/287-499      OS Escherichia coli P0301867.3
#=GS N4N4N6/287-499      DE CRISPR-associated endonuclease Cas3-HD
#=GS N4N4N6/287-499      DR GENE3D; 0917e0d515786210e0ff25610669ee57/287-499; 
#=GS N4N4N6/287-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS M9JM28/287-499      AC M9JM28
#=GS M9JM28/287-499      OS Escherichia coli 2719100
#=GS M9JM28/287-499      DE CRISPR-associated endonuclease Cas3-HD
#=GS M9JM28/287-499      DR GENE3D; 0917e0d515786210e0ff25610669ee57/287-499; 
#=GS M9JM28/287-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A080F396/287-499  AC A0A080F396
#=GS A0A080F396/287-499  OS Escherichia coli 6-537-08_S1_C3
#=GS A0A080F396/287-499  DE CRISPR-associated endonuclease Cas3-HD
#=GS A0A080F396/287-499  DR GENE3D; 0917e0d515786210e0ff25610669ee57/287-499; 
#=GS A0A080F396/287-499  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS N4PHW4/287-499      AC N4PHW4
#=GS N4PHW4/287-499      OS Escherichia coli P0301867.7
#=GS N4PHW4/287-499      DE CRISPR-associated endonuclease Cas3-HD
#=GS N4PHW4/287-499      DR GENE3D; 0917e0d515786210e0ff25610669ee57/287-499; 
#=GS N4PHW4/287-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS N3NEA0/287-499      AC N3NEA0
#=GS N3NEA0/287-499      OS Escherichia coli P0301867.13
#=GS N3NEA0/287-499      DE CRISPR-associated endonuclease Cas3-HD
#=GS N3NEA0/287-499      DR GENE3D; 0917e0d515786210e0ff25610669ee57/287-499; 
#=GS N3NEA0/287-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS M9G6K0/287-499      AC M9G6K0
#=GS M9G6K0/287-499      OS Escherichia coli P0301867.1
#=GS M9G6K0/287-499      DE CRISPR-associated endonuclease Cas3-HD
#=GS M9G6K0/287-499      DR GENE3D; 0917e0d515786210e0ff25610669ee57/287-499; 
#=GS M9G6K0/287-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS N2JR62/287-499      AC N2JR62
#=GS N2JR62/287-499      OS Escherichia coli P0301867.4
#=GS N2JR62/287-499      DE CRISPR-associated endonuclease Cas3-HD
#=GS N2JR62/287-499      DR GENE3D; 0917e0d515786210e0ff25610669ee57/287-499; 
#=GS N2JR62/287-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS N4NIG1/287-499      AC N4NIG1
#=GS N4NIG1/287-499      OS Escherichia coli P0301867.5
#=GS N4NIG1/287-499      DE CRISPR-associated endonuclease Cas3-HD
#=GS N4NIG1/287-499      DR GENE3D; 0917e0d515786210e0ff25610669ee57/287-499; 
#=GS N4NIG1/287-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A1L6AVE9/286-499  AC A0A1L6AVE9
#=GS A0A1L6AVE9/286-499  OS Escherichia coli
#=GS A0A1L6AVE9/286-499  DE CRISPR-associated endonuclease/helicase Cas3
#=GS A0A1L6AVE9/286-499  DR GENE3D; 82fdcef673701e4a19d8eebbf7a5ad8e/286-499; 
#=GS A0A1L6AVE9/286-499  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS A0A1J0HET3/286-499  AC A0A1J0HET3
#=GS A0A1J0HET3/286-499  OS Escherichia coli str. K-12 substr. W3110
#=GS A0A1J0HET3/286-499  DE CRISPR-associated helicase/endonuclease Cas3
#=GS A0A1J0HET3/286-499  DR GENE3D; 82fdcef673701e4a19d8eebbf7a5ad8e/286-499; 
#=GS A0A1J0HET3/286-499  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GS N2JY15/287-499      AC N2JY15
#=GS N2JY15/287-499      OS Escherichia coli P0301867.2
#=GS N2JY15/287-499      DE CRISPR-associated endonuclease Cas3-HD
#=GS N2JY15/287-499      DR GENE3D; 5ac41d9a3288cc1a0f4c63175b364f1f/287-499; 
#=GS N2JY15/287-499      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; 
#=GF TC 497.8 5.8E-154
#=GF SQ 16
P38036/286-499              LLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
A0A125WZG5/286-499          LLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
L3KEK5/286-499              LLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
A0A069XF18/286-499          LLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
A0A167CUS8/286-499          LLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
N4N4N6/287-499              -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
M9JM28/287-499              -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
A0A080F396/287-499          -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
N4PHW4/287-499              -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
N3NEA0/287-499              -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
M9G6K0/287-499              -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
N2JR62/287-499              -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
N4NIG1/287-499              -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
A0A1L6AVE9/286-499          LLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
A0A1J0HET3/286-499          LLDNGYQPRQLQVLVDALPVAPGLTVIEAPTGSGKTETALAYAWKLIDQQIADSVIFALPTQATANAMLTRMEASASHLFSSPNLILAHGNSRFNHLFQSIKSRAITEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
N2JY15/287-499              -LDNGYQPRQLQVLVDALPAAPGLTVIEAPTGSGKTETALAYAWKLIDQQLADSVIFALPTQATANAMLSRMEANASRLFTSPNLILAHGNSRFNHLFQSIKSRAFTEQGQEEAWVQCCQWLSQSNKKVFLGQIGVCTIDQVLISVLPVKHRFIRGLGIGRSVLIVDEVHAYDTYMNGLLEAVLKAQADVGGSVILLSATLPMKQKQKLLDTYG
#=GC scorecons              2999999999999999999699999999999999999999999999999969999999999999999996999969969969999999999999999999999995999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999999
#=GC scorecons_70           _******************_*************************************************_****_*****_************************_************************************************************************************************************
#=GC scorecons_80           _******************_******************************_******************_****_**_**_************************_************************************************************************************************************
#=GC scorecons_90           _******************_******************************_******************_****_**_**_************************_************************************************************************************************************
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