# STOCKHOLM 1.0 #=GF ID 3.40.50.300/FF/225514 #=GF DE DNA repair protein XRCC2 homolog #=GF AC 3.40.50.300/FF/225514 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 83.931 #=GS Q682D3/36-335 AC Q682D3 #=GS Q682D3/36-335 OS Arabidopsis thaliana #=GS Q682D3/36-335 DE DNA repair protein XRCC2 homolog #=GS Q682D3/36-335 DR GENE3D; 8680dfef3ad06aed48d867fe52940def/36-335; #=GS Q682D3/36-335 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q682D3/36-335 DR GO; GO:0000724; GO:0007131; #=GS A0A178UIJ5/36-335 AC A0A178UIJ5 #=GS A0A178UIJ5/36-335 OS Arabidopsis thaliana #=GS A0A178UIJ5/36-335 DE XRCC2 #=GS A0A178UIJ5/36-335 DR GENE3D; 8680dfef3ad06aed48d867fe52940def/36-335; #=GS A0A178UIJ5/36-335 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS F4KDQ6/36-317 AC F4KDQ6 #=GS F4KDQ6/36-317 OS Arabidopsis thaliana #=GS F4KDQ6/36-317 DE DNA repair protein XRCC2-like protein #=GS F4KDQ6/36-317 DR GENE3D; ec837cffc4417c7c784f295ccbe0eb36/36-317; #=GS F4KDQ6/36-317 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS A0A178UJL6/36-317 AC A0A178UJL6 #=GS A0A178UJL6/36-317 OS Arabidopsis thaliana #=GS A0A178UJL6/36-317 DE XRCC2 #=GS A0A178UJL6/36-317 DR GENE3D; 76c3b9f06e0de144cc40c67df0667754/36-317; #=GS A0A178UJL6/36-317 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS W1PLM3/38-253 AC W1PLM3 #=GS W1PLM3/38-253 OS Amborella trichopoda #=GS W1PLM3/38-253 DE Uncharacterized protein #=GS W1PLM3/38-253 DR GENE3D; 6f8f1960779cef1fc0bdc54fe7f0103e/38-253; #=GS W1PLM3/38-253 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Amborellales; Amborellaceae; Amborella; Amborella trichopoda; #=GS D7SWK6/19-321 AC D7SWK6 #=GS D7SWK6/19-321 OS Vitis vinifera #=GS D7SWK6/19-321 DE Putative uncharacterized protein #=GS D7SWK6/19-321 DR GENE3D; 72b446e921c67cfcb16bfa3ed9392fc0/19-321; #=GS D7SWK6/19-321 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Vitales; Vitaceae; Vitis; Vitis vinifera; #=GS A0A0K9QTC3/13-327 AC A0A0K9QTC3 #=GS A0A0K9QTC3/13-327 OS Spinacia oleracea #=GS A0A0K9QTC3/13-327 DE Uncharacterized protein #=GS A0A0K9QTC3/13-327 DR GENE3D; 079042a25b0dc0a7ec48ae4ab3d38e3d/13-327; #=GS A0A0K9QTC3/13-327 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Caryophyllales; Chenopodiaceae; Chenopodioideae; Anserineae; Spinacia; Spinacia oleracea; #=GS D7MRU9/37-112_148-316 AC D7MRU9 #=GS D7MRU9/37-112_148-316 OS Arabidopsis lyrata subsp. lyrata #=GS D7MRU9/37-112_148-316 DE Predicted protein #=GS D7MRU9/37-112_148-316 DR GENE3D; 28ff405cdcd75b72f73d517add08d338/37-112_148-316; #=GS D7MRU9/37-112_148-316 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS A0A0J8B6A9/35-334 AC A0A0J8B6A9 #=GS A0A0J8B6A9/35-334 OS Beta vulgaris subsp. vulgaris #=GS A0A0J8B6A9/35-334 DE Uncharacterized protein #=GS A0A0J8B6A9/35-334 DR GENE3D; ee33eef2b7e7419b780cc386d8157b7b/35-334; #=GS A0A0J8B6A9/35-334 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Caryophyllales; Chenopodiaceae; Betoideae; Beta; Beta vulgaris; Beta vulgaris subsp. vulgaris; #=GS V4K0P3/37-299 AC V4K0P3 #=GS V4K0P3/37-299 OS Eutrema salsugineum #=GS V4K0P3/37-299 DE Uncharacterized protein #=GS V4K0P3/37-299 DR GENE3D; 7949b4d5fa8d719e944b551e5ffb13de/37-299; #=GS V4K0P3/37-299 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A103Y2T3/36-321 AC A0A103Y2T3 #=GS A0A103Y2T3/36-321 OS Cynara cardunculus var. scolymus #=GS A0A103Y2T3/36-321 DE Uncharacterized protein #=GS A0A103Y2T3/36-321 DR GENE3D; b4a0688d17e1344bee061df009216ac5/36-321; #=GS A0A103Y2T3/36-321 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Asterales; Asteraceae; Carduoideae; Cardueae; Carduinae; Cynara; Cynara cardunculus; Cynara cardunculus subsp. cardunculus; Cynara cardunculus var. scolymus; #=GS A0A1J6K2T8/37-329 AC A0A1J6K2T8 #=GS A0A1J6K2T8/37-329 OS Nicotiana attenuata #=GS A0A1J6K2T8/37-329 DE Dna repair protein xrcc2-like protein #=GS A0A1J6K2T8/37-329 DR GENE3D; b58dea8916b007b1d8260e65078e0b5c/37-329; #=GS A0A1J6K2T8/37-329 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana; Nicotiana attenuata; #=GS A0A068VDW2/37-305 AC A0A068VDW2 #=GS A0A068VDW2/37-305 OS Coffea canephora #=GS A0A068VDW2/37-305 DE Uncharacterized protein #=GS A0A068VDW2/37-305 DR GENE3D; bbfdf13fcdcf0805bc28c5dfc61aa8c6/37-305; #=GS A0A068VDW2/37-305 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; asterids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea; Coffea canephora; #=GS M4F9L5/19-94_126-303 AC M4F9L5 #=GS M4F9L5/19-94_126-303 OS Brassica rapa subsp. pekinensis #=GS M4F9L5/19-94_126-303 DE Uncharacterized protein #=GS M4F9L5/19-94_126-303 DR GENE3D; ef9a440c3e46ab64d826d03e17d22ffa/19-94_126-303; #=GS M4F9L5/19-94_126-303 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GF TC 475.8 8.7E-147 #=GF SQ 14 Q682D3/36-335 --------------------HRVPLRAGNVVEITGASTSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGTIYEEKYPANENNR---KVSSNDHFSG-NVASKAQQPPFREFMPSSWQAFVTHKIIIRKSAD---YQSLQTGQQNLLAYSLEWLQPQLSRIDRFIVDD------ A0A178UIJ5/36-335 --------------------HRVPLRAGNVVEITGASTSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGTIYEEKYPANENNR---KVSSNDHFSG-NVASKAQQPPFREFMPSSWQAFVTHKIIIRKSAD---YQSLQTGQQNLLAYSLEWLQPQLSRIDRFIVDD------ F4KDQ6/36-317 --------------------HRVPLRAGNVVEITGASTSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGTIYEEKYPANENNR---KVSSNDHFSG-NVASKAQQPPFREFMPSSWQAFVTHKIIIRKSAD---YQSLQTGQQNLLAYS------------------------ A0A178UJL6/36-317 --------------------HRVPLRAGNVVEITGASTSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQANWLGNGAWWQLEESNVKSCKSAEEKTKTVFDEELYASCMKRFLYVRCYDSLELLSSLKTLHYRIQ-QQEACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVETIVQELKKLLLVHSLVVLATKGTIYEEKYPANENNR---KVSSNDHFSG-NVASKAQQPPFREFMPSSWQAFVTHKIIIRKSAD---YQSLQTGQQNLLAYS------------------------ W1PLM3/38-253 -----------------------PLCAGNVVEIVGPSPSAKSYILLQAAINCILPKEWNGIHYGGLERLVMYFDLDCRFDVSYLSQSLKRRIVRAQGPD---------------SHSLVEQDTHLDEVLFLACLKRFLYIRCYNSLEFLAALKTIRPQLQTESEGHGIGVHFLMFDSISAYYWIDRAYKPLSSAISNRKPFSLQSITEAVVQELRQLLQFHPMLVLATKPALLGLEFSACHITR---KQSSSPSATG----------------------------------------------------------------------------- D7SWK6/19-321 ---------------------RVPLRLGNVVEIAGPSPSAKTQILIQAAVYCILPKEWRGVHYGGLEHLVMFIDLDCRFDILCLSQSLKHRLMETSGSGNKVNW---EQNDDPWGSGTEEPNIGYDEELFAACMRRFLYIRCYDSFEFLATLKTLRYRLQRARETHGVTAHFLMIDSIGAFYWVDRASTSLHLESNSRKRLSLQSISETVVEEIRKLLLVHPMLVLATKATILGDTYSTNEVKRTSMKLSSNDPSNLRTVTGGPQKLSYREFMPLVWQSFVTHRILVRAADDDPANSK----YQSRSIFLSEWLMPSLNFSDKFIVRDAGV--- A0A0K9QTC3/13-327 AETYLSRVSTTRLPLLLPPLHRLPLRPGNVVEIVGPSPSGKTHILLQVAINCILPKEWKGVSYGGLEQSVMFIDLDCRFDILRLLQLLKLRIYSVCQVS---------------NDLGDAGNWTCDEELIHKCLERFLYVRCYDSLEFLATLKTLSYQLQT-RKEFASKVYFMMIDSIGAYYWVDRASTSMPLGSNNRKIFSLQSVTEAVVREIKKFLRVQPMLVLATKATVFADKSVPNDIKRPFRKWSSEDAAGQHTMESSPENALHREYMPLAWQSFVTHRISVRPSSQEYRASNC---TTDEQVYLGQWLLPSLGFKDKFVIRDVGIIAV D7MRU9/37-112_148-316 ---------------------RVPLRAGNVVEITGASPSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFLDLDCRFDVLRLSQMLKHRLLQAN-----------------------------------RCMKRFLYVRCYDSLELLSSLKTLHYRIR-QQEACGSQVGVLMIDSIGAFHWTDRLSSSLALETHNRKSLSLTNVVEMIVQELKKLLQVHSLVVLATKATIYEEKYPAIENNR---KFSSNDDFPG-NAASKAQQPLIREFMPSSWQAFVTHKIIIRKSAD---HRSLQTGQQNLSAY------------------------- A0A0J8B6A9/35-334 ----------------------FPLHSGNVVEIVGPSSSAKTHILLQVAVHSILPKEWNGVSYGGLEKSVMFVDLDCRFDVLRLRRLLQLRIFSVHQLSRGVK-----------NELHDARDWTCDQELINKCLERFLYVRCYDSLEFLAMLKTLSYQLQTKRQELASKVYFMMIDSIGAYYWVDRASTSVPLGSNNRKIFSLQSVTEAVVREIQNFLHVQPMLVLATKATIFGDKSATNDIKRTFRKWSSEDASGHHTTESSPEK-VHREYMPSAWQSFVTHRISVRPSSPESCATNCLNNTTDEQVYLAQWLLPSLGFKDKFVINDAGISIV V4K0P3/37-299 ---------------------RVPLRAGNVVEITGASPSAKTQILIQAAISCILPKTWNGIHYGGLGKLVLFVDLDCRFDVLRLSEMLKHRLLQAN----------------------HKSKTLFDEDLYVSCMKRFLYLRCYDSLELLSSLKTLHYRIR-QQEACGSQVGVLMIDSIGAFHWTDRLSSSLALETNNRKSLSLTNVVETIVQEMKKLLQVHSLVVIATKTTIYEEKYSTNENSR---KFSSNDDLSG-NSSSRAHQPPFREFMPSTWQAFVTHKIIIRKSGD---HQSLQTGKQSLSAYSLEWL-------------------- A0A103Y2T3/36-321 -----------------------PLVVSNIVEIVGPSPSAKTEILLQVAVSCILPKSWNGVQYGGLEHSVLFLDLDCRLDIFRLSHCLKLRITEANRLHKITKK---QKGFDVSNHIPEHQCKYDDMDLFTECMKRFSYTRCYDSFEFLAALKVLHHKLEKERNMDGSGVHVLMIDNIGAFYWINRGFSSLPQGNPNRKNFSLQSVFETVVPEIKKLLLLHPMLVLATKMVTYQVKSSYS-------SWVSGVASEVNIG-----KGTYREYMPSIWQSFVTHRILVRASDD---KRK----LQDRVCYLAEWLLPALNLTDEFVVGDAGI--- A0A1J6K2T8/37-329 ---------------------RIPLRAGNVVEIVGPSPSSKTRILIQAAINCILPKAWKGINYGGLERLVMFVDLDCRFDVLGLSQSLKQRIIKANGHDVVHKL---NKVDDSLDV-----HSEYDQELFAVSMRRFLYIRCYDSSEFLATLKTMHFQLQKEKEAHGTGVYLLMIDSIGAFYWMDRASPSIPPGSINRKSLSLQSVSESVVQEIQRILLVHPMLVLTTKATSLQDKYTTREVRNIG-QLSVEGTLDSKTIRSSASVQLYREYMPSVWQSFVSHRILVRPSDD---SSK----YQKQPIYLSEWLLPSLKISDKFTFNDDG---- A0A068VDW2/37-305 ---------------------KLPLRPGNVVEVAGPPSSGKTHILMQAAISCILPKQWKGVQFGGMERLAVFVDLDCRFDVLRFSRLLKHKLIQANSNDMKS-------------------QTQYDKELFAECMRRFLYIRCYNSLEFLATLKTMNKQLQKQKDIQGVGVHLLVLDSIGAFYWMDRALPSLLVGGSNRKSLSLQIVMENVVQDLQKLLLVHPLLVLATKNSISGDKSTADELMR---NTSS------------GPRPKHREYMPSVWQSFVTHRIHVAASEH---NGN----HQRQHTYLTEWILPSVNFSDRFVINEDGV--- M4F9L5/19-94_126-303 ---------------------RVPLRAGNVVEITGSSPTAKTQILIQAAITCILPKTWNGVHYGGLEKLVLFLDLDCRFDVLRLSDMLKHRLLEAY-----------------------------------RCMKRFLYLRCYDSLELLSTLKTLHYRIR-LQEACGSQVGVLMIDSIGAFHWTDRLSSSLALEKNNRKSLSLTNVVETIVQEMKKLMQVHSLVVIATKATIYEDKYPTNENNR---NISSHSDLLG-NPSSKAQQPPFREFMPSSWQAFVTHKIFIRKSGVECTARVYESGEGQITSCRLE--------KKK----------- #=GC scorecons 0000000000000000000004399558989985958586975996969748999949697589986568685999998976686549848644652221111000010001102111221222364464338769979599979696964998755666135643754845787989797794894547745544899469955749579686666847766697899465545754545336000627834332303224233333477577537747767573563634000233111124322363133312121113221112010000 #=GC scorecons_70 _______________________**__******_*_*_****_**_****_*****_*_**_*****__***_*********_**__**_**__*______________________________*__*___**_****_*********__****___**______*__*__***********_**___**_____***_***__*_*_**_*_****_**_*******_*____*_______*_____**__________________**_**__**_****_*__*_*____________________________________________ #=GC scorecons_80 _______________________**__******_*_*_*_**_**_*_**_*****_*_*__****___*_*_********__*___**_*_________________________________________**_****_*****_*_*__***____________*__*__**_******_*_**___*______***__**__*_*__*_*____*__*___*****____________________**__________________**_**__**_**_*_*_________________________________________________ #=GC scorecons_90 _______________________**__******_*_*_*_*__**_*_*__*****_*_*__****___*_*_*******___*___**_*_________________________________________*__**_*_***_*_*_*__**________________*___*_***_*__*_**__________***__**____*__*_*____*______*_***_________________________________________________________________________________________________________ //