# STOCKHOLM 1.0
#=GF ID 3.30.450.20/FF/87676
#=GF DE PAS domain-containing serine/threonine-protein kinase
#=GF AC 3.30.450.20/FF/87676
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 24.179
#=GS 1ll8A00/1-114       AC Q96RG2
#=GS 1ll8A00/1-114       OS Homo sapiens
#=GS 1ll8A00/1-114       DE PAS domain-containing serine/threonine-protein kinase
#=GS 1ll8A00/1-114       DR CATH; 1ll8; A:1-114; 
#=GS 1ll8A00/1-114       DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS 1ll8A00/1-114       DR GO; GO:0004674; GO:0005515; GO:0005634; GO:0005737; GO:0005829; GO:0006468; GO:0035091; GO:0043576; GO:0045719; GO:0045727; GO:0046777; GO:0070092; GO:2000505; 
#=GS 1ll8A00/1-114       DR EC; 2.7.11.1; 
#=GS Q96RG2/127-237      AC Q96RG2
#=GS Q96RG2/127-237      OS Homo sapiens
#=GS Q96RG2/127-237      DE PAS domain-containing serine/threonine-protein kinase
#=GS Q96RG2/127-237      DR GENE3D; 306a5f50d2ab1d0b3693279eab13c5a0/127-237; 
#=GS Q96RG2/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS Q96RG2/127-237      DR GO; GO:0004674; GO:0005515; GO:0005634; GO:0005737; GO:0005829; GO:0006468; GO:0035091; GO:0043576; GO:0045719; GO:0045727; GO:0046777; GO:0070092; GO:2000505; 
#=GS Q96RG2/127-237      DR EC; 2.7.11.1; 
#=GS Q8CEE6/125-235      AC Q8CEE6
#=GS Q8CEE6/125-235      OS Mus musculus
#=GS Q8CEE6/125-235      DE PAS domain-containing serine/threonine-protein kinase
#=GS Q8CEE6/125-235      DR GENE3D; e5dde61acf748eb18f588a0e96da883c/125-235; 
#=GS Q8CEE6/125-235      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; 
#=GS Q8CEE6/125-235      DR GO; GO:0004674; GO:0005622; GO:0005634; GO:0005737; GO:0005829; GO:0006468; GO:0035091; GO:0043576; GO:0045719; GO:0046777; GO:0070092; GO:2000505; 
#=GS Q8CEE6/125-235      DR EC; 2.7.11.1; 
#=GS B7Z7R6/127-237      AC B7Z7R6
#=GS B7Z7R6/127-237      OS Homo sapiens
#=GS B7Z7R6/127-237      DE cDNA FLJ60959, highly similar to PAS domain-containing serine/threonine-protein kinase (EC 2.7.11.1)
#=GS B7Z7R6/127-237      DR GENE3D; ac706172acfa1d1ca4a076292b7ffefd/127-237; 
#=GS B7Z7R6/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Homo; Homo sapiens; 
#=GS F7HD96/127-237      AC F7HD96
#=GS F7HD96/127-237      OS Callithrix jacchus
#=GS F7HD96/127-237      DE Uncharacterized protein
#=GS F7HD96/127-237      DR GENE3D; 3674062946e3d2ec8a109248fc43ae5e/127-237; 
#=GS F7HD96/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS H2P964/127-237      AC H2P964
#=GS H2P964/127-237      OS Pongo abelii
#=GS H2P964/127-237      DE Uncharacterized protein
#=GS H2P964/127-237      DR GENE3D; 6067e6bed2f140c27ae3510aa501b40c/127-237; 
#=GS H2P964/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Ponginae; Pongo; Pongo abelii; 
#=GS Q5PQT0/123-233      AC Q5PQT0
#=GS Q5PQT0/123-233      OS Rattus norvegicus
#=GS Q5PQT0/123-233      DE PAS domain containing serine/threonine kinase
#=GS Q5PQT0/123-233      DR GENE3D; 8e412127d124abd2075f1e6747ce0d6f/123-233; 
#=GS Q5PQT0/123-233      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Rattus; Rattus norvegicus; 
#=GS A0A0D9R0L2/138-248  AC A0A0D9R0L2
#=GS A0A0D9R0L2/138-248  OS Chlorocebus sabaeus
#=GS A0A0D9R0L2/138-248  DE Uncharacterized protein
#=GS A0A0D9R0L2/138-248  DR GENE3D; aae7f8dac303b781e4663abe2d2fee06/138-248; 
#=GS A0A0D9R0L2/138-248  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Chlorocebus; Chlorocebus sabaeus; 
#=GS A0A096NEQ0/127-237  AC A0A096NEQ0
#=GS A0A096NEQ0/127-237  OS Papio anubis
#=GS A0A096NEQ0/127-237  DE Uncharacterized protein
#=GS A0A096NEQ0/127-237  DR GENE3D; b0a793ef5aa2a60da9708044080e5c37/127-237; 
#=GS A0A096NEQ0/127-237  DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Papio; Papio anubis; 
#=GS G7PKH1/127-237      AC G7PKH1
#=GS G7PKH1/127-237      OS Macaca fascicularis
#=GS G7PKH1/127-237      DE Putative uncharacterized protein
#=GS G7PKH1/127-237      DR GENE3D; b1165d59b69dbb603cf7a1174fcfb114/127-237; 
#=GS G7PKH1/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca fascicularis; 
#=GS G1RTV9/127-237      AC G1RTV9
#=GS G1RTV9/127-237      OS Nomascus leucogenys
#=GS G1RTV9/127-237      DE Uncharacterized protein
#=GS G1RTV9/127-237      DR GENE3D; b84721fa9bf2eedcabacab9d84441df8/127-237; 
#=GS G1RTV9/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hylobatidae; Nomascus; Nomascus leucogenys; 
#=GS F7H7U3/127-237      AC F7H7U3
#=GS F7H7U3/127-237      OS Callithrix jacchus
#=GS F7H7U3/127-237      DE Uncharacterized protein
#=GS F7H7U3/127-237      DR GENE3D; c0cfa35f8d40037af25eff50ccaecf74/127-237; 
#=GS F7H7U3/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Platyrrhini; Cebidae; Callitrichinae; Callithrix; Callithrix; Callithrix jacchus; 
#=GS H2R2A5/127-237      AC H2R2A5
#=GS H2R2A5/127-237      OS Pan troglodytes
#=GS H2R2A5/127-237      DE Uncharacterized protein
#=GS H2R2A5/127-237      DR GENE3D; ce49bd5e22684dbae1f47a27a0146504/127-237; 
#=GS H2R2A5/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Pan; Pan troglodytes; 
#=GS G3RAL0/127-237      AC G3RAL0
#=GS G3RAL0/127-237      OS Gorilla gorilla gorilla
#=GS G3RAL0/127-237      DE Uncharacterized protein
#=GS G3RAL0/127-237      DR GENE3D; d9d3107d8644dd33c05b2e650442ae50/127-237; 
#=GS G3RAL0/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Hominoidea; Hominidae; Homininae; Gorilla; Gorilla gorilla; Gorilla gorilla gorilla; 
#=GS F7FPL8/127-237      AC F7FPL8
#=GS F7FPL8/127-237      OS Macaca mulatta
#=GS F7FPL8/127-237      DE Uncharacterized protein
#=GS F7FPL8/127-237      DR GENE3D; eea180517467683b4fd18475ed6c2918/127-237; 
#=GS F7FPL8/127-237      DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Primates; Haplorrhini; Simiiformes; Catarrhini; Cercopithecoidea; Cercopithecidae; Cercopithecinae; Macaca; Macaca mulatta; 
#=GF TC 236.4 3.5E-74
#=GF SQ 15
1ll8A00/1-114               GAMDPEFNKAIFTVDAKTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIISRSGEKIPVSVWMKRMRQERRLCCVVVLEPVER
Q96RG2/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIISRSGEKIPVSVWMKRMRQERRLCCVVVLEPVER
Q8CEE6/125-235              -VCNP--NKAVFTVDAKTTEILVANDKACSLLGYSSHDLIGQKLAQFFLKSDSEVVEALSEEHVEADGHAAVVFGTVVDIVSRIGEKIPVSVWIKRLQQDRGLCCVVVLEPVER
B7Z7R6/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIISRSGEKIPVSVWMKRMRQERRLCCVVVLEPVER
F7HD96/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIVSRSGEKIPVSVWMKKMRQEHRLCCVVVLEPVER
H2P964/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLMQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIISRSGEKIPVSVWMKRMQQEHRLCCVVVLEPVER
Q5PQT0/123-233              -VCNP--NKAVFTVDAKTTEILVANDKACSLLGYSSHDLIGQKLTQFFLKSDSEVVEALSEEHVEADGHAAVVFGTVVDIVSRSGEKIPVSVWIKRLQQDRGLCCVVVLEPVER
A0A0D9R0L2/138-248          -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLTQFFLRSDSHVVEALSEEHMEADGHAAVVFGTVVDVISRSGEKIPVSVWMKRMRQEHRLCCVVVLEPVER
A0A096NEQ0/127-237          -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDVISRSGEKIPVSVWMKRMRQEHRLCCVVVLEPVER
G7PKH1/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDVISRSGEKIPVSVWMKRMRQEHRLCCVVVLEPVER
G1RTV9/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIISRSGEKIPVSVWMKRMRQEHRLCCVVVLEPVER
F7H7U3/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIVSRSGEKIPVSVWMKKMRQEHRLCCVVVLEPVER
H2R2A5/127-237              -VCNP--NKAIFTVDAKTTEILVTNDKACRLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDIISRSGEKIPVSVWMKRMRQEHRLCCVVVLEPVER
G3RAL0/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVCGTVVDIISRSGEKIPVSVWMKRMRQEHRLCCVVVLEPVER
F7FPL8/127-237              -VCNP--NKAIFTVDAKTTEILVANDKACRLLGYSSQDLIGQKLTQFFLRSDSDVVEALSEEHMEADGHAAVVFGTVVDVISRSGEKIPVSVWMKRMRQEHRLCCVVVLEPVER
#=GC scorecons              077790099979999999999998999994999999799999997999979996999999999699999999989999977997999999999798769766999999999999
#=GC scorecons_70           _****__**********************_************************************************************************************
#=GC scorecons_80           _*_**__**********************_******_*******_********_*********_****************_**_*********_**__**__************
#=GC scorecons_90           ____*__***_******************_******_*******_****_***_*********_***************__**_*********_**__*___************
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