# STOCKHOLM 1.0
#=GF ID 3.30.420.10/FF/45240
#=GF DE Small RNA degrading nuclease 3
#=GF AC 3.30.420.10/FF/45240
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 52.709
#=GS A3KPE8/135-311      AC A3KPE8
#=GS A3KPE8/135-311      OS Arabidopsis thaliana
#=GS A3KPE8/135-311      DE Small RNA degrading nuclease 1
#=GS A3KPE8/135-311      DR GENE3D; 0160232d1bf4c2bc4ca8d8bc09520c55/135-311; 
#=GS A3KPE8/135-311      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A3KPE8/135-311      DR GO; GO:0008408; GO:0010587; 
#=GS Q8RXK2/140-318      AC Q8RXK2
#=GS Q8RXK2/140-318      OS Arabidopsis thaliana
#=GS Q8RXK2/140-318      DE Small RNA degrading nuclease 3
#=GS Q8RXK2/140-318      DR GENE3D; c9b1f8975e692bf3591c0fdc2a3fd0a0/140-318; 
#=GS Q8RXK2/140-318      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q8RXK2/140-318      DR GO; GO:0016592; 
#=GS C0J1J0/135-311      AC C0J1J0
#=GS C0J1J0/135-311      OS Arabidopsis thaliana
#=GS C0J1J0/135-311      DE Small RNA-degrading nuclease 1
#=GS C0J1J0/135-311      DR GENE3D; 0160232d1bf4c2bc4ca8d8bc09520c55/135-311; 
#=GS C0J1J0/135-311      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS Q9FFG1/138-317      AC Q9FFG1
#=GS Q9FFG1/138-317      OS Arabidopsis thaliana
#=GS Q9FFG1/138-317      DE Small RNA degrading nuclease 2
#=GS Q9FFG1/138-317      DR GENE3D; 441136a46c6d9edb7b0d9f84c6255a31/138-317; 
#=GS Q9FFG1/138-317      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A1I9LRJ2/38-214   AC A0A1I9LRJ2
#=GS A0A1I9LRJ2/38-214   OS Arabidopsis thaliana
#=GS A0A1I9LRJ2/38-214   DE Small RNA degrading nuclease 1
#=GS A0A1I9LRJ2/38-214   DR GENE3D; d5d3cd4fa18c8537fc2e0ccb5ccbba6a/38-214; 
#=GS A0A1I9LRJ2/38-214   DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS A0A178UGK8/140-318  AC A0A178UGK8
#=GS A0A178UGK8/140-318  OS Arabidopsis thaliana
#=GS A0A178UGK8/140-318  DE SDN3
#=GS A0A178UGK8/140-318  DR GENE3D; c9b1f8975e692bf3591c0fdc2a3fd0a0/140-318; 
#=GS A0A178UGK8/140-318  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS R0FF86/138-314      AC R0FF86
#=GS R0FF86/138-314      OS Capsella rubella
#=GS R0FF86/138-314      DE Uncharacterized protein
#=GS R0FF86/138-314      DR GENE3D; 0a930c61ae2317fd6672588e3c88c3a9/138-314; 
#=GS R0FF86/138-314      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GS D7LYY2/138-316      AC D7LYY2
#=GS D7LYY2/138-316      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LYY2/138-316      DE Exonuclease family protein
#=GS D7LYY2/138-316      DR GENE3D; b2939a50a250bca422c9c61934992625/138-316; 
#=GS D7LYY2/138-316      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS D7LT27/135-311      AC D7LT27
#=GS D7LT27/135-311      OS Arabidopsis lyrata subsp. lyrata
#=GS D7LT27/135-311      DE At3g50100
#=GS D7LT27/135-311      DR GENE3D; fb3cf030d50b9c2b03920f2fadebf39c/135-311; 
#=GS D7LT27/135-311      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GF TC 321.9 2.9E-100
#=GF SQ 9
A3KPE8/135-311              MESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKY-----PNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEKRVDTTIKPSKEML--E
Q8RXK2/140-318              IKSTRMLSIDCEMVTCEDGSQALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGVTAEDLERATLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEF-----VDAPKTQRPSLNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKLVLAAVEKGAATLIQPTEEMMVAE
C0J1J0/135-311              MESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKY-----PNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEKRVDTTIKPSKEML--E
Q9FFG1/138-317              -TKIEMIAIDCEMVLCEDGSEAVVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATISVVDIQEKLLMFISEDTILVGQSLNHDLKVLKVDHARVIDTSLVFKYNYDGTRRPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNGAETSVPLSKEML---
A0A1I9LRJ2/38-214           MESTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILDEFVKPNKPVVDYRTDITGITAEDIENASLSVVDIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFKY-----PNTRKLRRPSLNNLCKSILGYEVRKTGVPHDCVHDASAAMKLALAVVEKRVDTTIKPSKEML--E
A0A178UGK8/140-318          IKSTRMLSIDCEMVTCEDGSQALVRVGAVDRDLKVVLDKFVKPDKPVIDYKTDITGVTAEDLERATLSVADIQKKLRRFLSVGTILVGHGLHNDLQVLRIDHARVIDTSYVFEF-----VDAPKTQRPSLNNLCKSVLGQEVRMDGAAHNCVHDAAAAMKLVLAAVEKGAATLIQPTEEMMVAE
R0FF86/138-314              -TKIEMIAIDCEMVLCGDGSEAVVRVAAVDRDLKVILDEFVKPHQPVVDYRTFVTGLTSKDLEKATLSVVDIQEKLQMFLSEDTILVGQSLNNDLKVLKMDHARVIDTSLVFKYNYGGTRKPLRLKRPSLNYLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILDNGVETSVPLSK------
D7LYY2/138-316              -TKIEMIAIDCEMVLCEDGSEALVRVAAVDRDLKVILDEFVKPNQPVVDYRTFITGLTAQDLEKATLSVVDIQEKLLMFLSEDTILVGQSLNHDLKVLKMDHARVIDTSLVFKYNYDGTRRPLRLKRPSLNHLCKCILGYEVQKEGVPHNCVHDAEAAMKLVLAILENGVETSVPLSKEM----
D7LT27/135-311              MKSTNMVAVDCEMVLCEDGTEGLVRVGVVDRDLKVILYEFVKPDKHIVDYRTDITGITAEDIENATLSVADIQETLQPFLSTGTILVGHSLNRDLEVLKIDHPKVIDTALVFRY-----SNTRKLRRPSLNNLCKSILGYEVRKTGVPHNCVHDAEAAMKLALAVVEKRVDTTIKPSKEML--E
#=GC scorecons              2456495679999969799666699966999999979769999567879979489959769695967996999659439794699999669649959976996799996699670000034537659999959996799699654966969999949999969956765659474566663003
#=GC scorecons_70           _____*_*******_****_*_****__***************_********_***_**_***_*****_****_*__***__*********_**_******_*****__**_*_________*__*****_***_***_***__**********_*****_**_**____*_*__****____
#=GC scorecons_80           _____*___*****_****____***__**********_****__*******_***_**_*_*_*_***_***__*__***__*****__*__**_***_**__****__**_*____________*****_***_***_**___*__*_*****_*****_**__*____*____________
#=GC scorecons_90           _____*___*****_*_**____***__*******_*__****___*_**_*__**_*__*_*_*__**_***__*__*_*__*****__*__**_**__**__****__**______________*****_***__**_**___*__*_*****_*****_**_______*____________
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