# STOCKHOLM 1.0
#=GF ID 3.30.420.10/FF/35338
#=GF DE Pol polyprotein
#=GF AC 3.30.420.10/FF/35338
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 8.607
#=GS P25059/416-559   AC P25059
#=GS P25059/416-559   OS Bovine leukemia virus (AUSTRALIAN ISOLATE)
#=GS P25059/416-559   DE Pol polyprotein
#=GS P25059/416-559   DR GENE3D; 1229ff5674870bc43cebfdb33fffb093/416-559; 
#=GS P25059/416-559   DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS P25059/416-559   DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS P03361/416-559   AC P03361
#=GS P03361/416-559   OS Bovine leukemia virus (JAPANESE ISOLATE BLV-1)
#=GS P03361/416-559   DE Pol polyprotein
#=GS P03361/416-559   DR GENE3D; 2198b88c9339ebe6ebe12f78aef94c85/416-559; 
#=GS P03361/416-559   DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS P03361/416-559   DR EC; 2.7.7.49; 2.7.7.7; 3.1.26.4; 
#=GS A7KWZ1/981-1124  AC A7KWZ1
#=GS A7KWZ1/981-1124  OS Bovine leukemia virus
#=GS A7KWZ1/981-1124  DE Gag-pro-pol polyprotein
#=GS A7KWZ1/981-1124  DR GENE3D; 1b38411fd5d2dbb632446031a5f7852c/981-1124; 
#=GS A7KWZ1/981-1124  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS O12381/22-166    AC O12381
#=GS O12381/22-166    OS Bovine leukemia virus
#=GS O12381/22-166    DE Pol protein
#=GS O12381/22-166    DR GENE3D; 24b95704d22fe16f9fb43e737e3ae4ea/22-166; 
#=GS O12381/22-166    DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GS L0PI28/981-1124  AC L0PI28
#=GS L0PI28/981-1124  OS Bovine leukemia virus
#=GS L0PI28/981-1124  DE Gag-pro-pol polyprotein
#=GS L0PI28/981-1124  DR GENE3D; 706de6431cc9d34a984d1b49b4226684/981-1124; 
#=GS L0PI28/981-1124  DR ORG; Viruses; Retroviridae; Orthoretrovirinae; Deltaretrovirus; Bovine leukemia virus; 
#=GF TC 325.5 9.4E-102
#=GF SQ 5
P25059/416-559           VTRAEVFLTPQFSPEPIPAALCLFSDGAARRGAYCLWKDHLLDFQAVPAPESAQKGELAGLLAGLAAAPPEPLNIWVDSKYLYSLLRTLVLGAWLQPDPVPSYALLYKSLLRHPAIFVGHVRSHSSASHPIASLNNYVDQLLPL--
P03361/416-559           ITRAEVFLTPQFSPDPIPAALCLFSDGATGRGAYCLWKDHLLDFQAVPAPESAQKGELAGLLAGLAAAPPEPVNIWVDSKYLYSLLRTLVLGAWLQPDPVPSYALLYKSLLRHPAIVVGHVRSHSSASHPIASLNNYVDQLLPL--
A7KWZ1/981-1124          ITRAEVFLTPQFSPDPIPAALCLFSDGATGRGAYCLWKDHLLDFQAVPAPESAQKGELAGLLAGLAAAPPEPVNIWVDSKYLYSLLRTLVLGAWLQPDPVPSYALLYKNLLRHPAIFVGHVRSHSSASHPIASLNNYVDQLLPL--
O12381/22-166            -TRAEVFLTPQFSPEPIPTALCLFSDGATGRGAYCLWKDHLLDFQAVPAPESAQKGELAGLLAGLAAAPPEPLNIWVDSKYLYSLLRTLVLGAWLQPDPLPSYALLYKNLLRHPAIFVGHVRSHSSASHPIASLNNYVDQLLPLET
L0PI28/981-1124          ITRAEVFLTPQFSPDPIPAALCLFSDGATGRGAYCLWKDHLLDFQAVPAPESAQKGELAGLLAGLAAAPPEPVNIWVDSKYLYSLLRTLVLGAWLQPDPVPSYALLYKSLLRHPAIFVGHVRSHSSASHPIASLNNYVDQLLPL--
#=GC scorecons           29999999999999699969999999996699999999999999999999999999999999999999999959999999999999999999999999969999999959999999699999999999999999999999999900
#=GC scorecons_70        _*****************_*****************************************************_**************************_********_***********************************__
#=GC scorecons_80        _*************_***_*********__******************************************_**************************_********_*******_***************************__
#=GC scorecons_90        _*************_***_*********__******************************************_**************************_********_*******_***************************__
//