# STOCKHOLM 1.0 #=GF ID 3.30.420.10/FF/27207 #=GF DE Crossover junction endodeoxyribonuclease RuvC #=GF AC 3.30.420.10/FF/27207 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 54.262 #=GS C8PSB6/11-163 AC C8PSB6 #=GS C8PSB6/11-163 OS Treponema vincentii ATCC 35580 #=GS C8PSB6/11-163 DE Crossover junction endodeoxyribonuclease RuvC #=GS C8PSB6/11-163 DR GENE3D; 136f222d0a35e74aec9739fad7080d56/11-163; #=GS C8PSB6/11-163 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema vincentii; #=GS C8PSB6/11-163 DR EC; 3.1.22.4; #=GS A0A0E2E8G2/16-170 AC A0A0E2E8G2 #=GS A0A0E2E8G2/16-170 OS Treponema denticola AL-2 #=GS A0A0E2E8G2/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS A0A0E2E8G2/16-170 DR GENE3D; 1abee0ab3fe4e738581cf7396ffe6acb/16-170; #=GS A0A0E2E8G2/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS A0A0E2E8G2/16-170 DR EC; 3.1.22.4; #=GS M2CE54/16-170 AC M2CE54 #=GS M2CE54/16-170 OS Treponema denticola ATCC 35404 #=GS M2CE54/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS M2CE54/16-170 DR GENE3D; 292687b3aa3334d71ea3748e0e260e31/16-170; #=GS M2CE54/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS M2CE54/16-170 DR EC; 3.1.22.4; #=GS Q73LJ8/16-170 AC Q73LJ8 #=GS Q73LJ8/16-170 OS Treponema denticola ATCC 35405 #=GS Q73LJ8/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS Q73LJ8/16-170 DR GENE3D; 292687b3aa3334d71ea3748e0e260e31/16-170; #=GS Q73LJ8/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS Q73LJ8/16-170 DR EC; 3.1.22.4; #=GS E9S3T8/1-94 AC E9S3T8 #=GS E9S3T8/1-94 OS Treponema denticola F0402 #=GS E9S3T8/1-94 DE Crossover junction endodeoxyribonuclease RuvC #=GS E9S3T8/1-94 DR GENE3D; 7a9ee899c54c8a297edba8c9f1785618/1-94; #=GS E9S3T8/1-94 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS E9S3T8/1-94 DR EC; 3.1.22.4; #=GS M2SI31/16-170 AC M2SI31 #=GS M2SI31/16-170 OS Treponema denticola US-Trep #=GS M2SI31/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS M2SI31/16-170 DR GENE3D; 89bdf565eed2ec42f000a153592f7660/16-170; #=GS M2SI31/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS M2SI31/16-170 DR EC; 3.1.22.4; #=GS A0A0F6MSK3/16-170 AC A0A0F6MSK3 #=GS A0A0F6MSK3/16-170 OS Treponema denticola OTK #=GS A0A0F6MSK3/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS A0A0F6MSK3/16-170 DR GENE3D; 8bdff1e41537eb76c9fb74bd05031992/16-170; #=GS A0A0F6MSK3/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS A0A0F6MSK3/16-170 DR EC; 3.1.22.4; #=GS A0A088RFA5/16-170 AC A0A088RFA5 #=GS A0A088RFA5/16-170 OS Treponema putidum #=GS A0A088RFA5/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS A0A088RFA5/16-170 DR GENE3D; 9cae220619dd5a6408a7623130535469/16-170; #=GS A0A088RFA5/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema putidum; #=GS A0A088RFA5/16-170 DR EC; 3.1.22.4; #=GS A0A0E2E8F6/16-170 AC A0A0E2E8F6 #=GS A0A0E2E8F6/16-170 OS Treponema denticola H-22 #=GS A0A0E2E8F6/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS A0A0E2E8F6/16-170 DR GENE3D; acd877bb1d23ccd8aad6d11f89d333c6/16-170; #=GS A0A0E2E8F6/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS A0A0E2E8F6/16-170 DR EC; 3.1.22.4; #=GS S3K8L8/11-165 AC S3K8L8 #=GS S3K8L8/11-165 OS Treponema medium ATCC 700293 #=GS S3K8L8/11-165 DE Crossover junction endodeoxyribonuclease RuvC #=GS S3K8L8/11-165 DR GENE3D; ae9727623f5abec63da5ad38ef276486/11-165; #=GS S3K8L8/11-165 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema medium; #=GS S3K8L8/11-165 DR EC; 3.1.22.4; #=GS M2BD76/16-170 AC M2BD76 #=GS M2BD76/16-170 OS Treponema denticola SP33 #=GS M2BD76/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS M2BD76/16-170 DR GENE3D; b04b33f3991ec7a7215961d762d3c86d/16-170; #=GS M2BD76/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS M2BD76/16-170 DR EC; 3.1.22.4; #=GS S3KP01/16-170 AC S3KP01 #=GS S3KP01/16-170 OS Treponema denticola SP23 #=GS S3KP01/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS S3KP01/16-170 DR GENE3D; c89c9a938020842be7aa8d5eb4b3d69c/16-170; #=GS S3KP01/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS S3KP01/16-170 DR EC; 3.1.22.4; #=GS M2BK38/16-170 AC M2BK38 #=GS M2BK38/16-170 OS Treponema denticola H1-T #=GS M2BK38/16-170 DE Crossover junction endodeoxyribonuclease RuvC #=GS M2BK38/16-170 DR GENE3D; cce3a79263345cd4bfb779b63e15d044/16-170; #=GS M2BK38/16-170 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema denticola; #=GS M2BK38/16-170 DR EC; 3.1.22.4; #=GS A0A0A0X1Z2/11-164 AC A0A0A0X1Z2 #=GS A0A0A0X1Z2/11-164 OS Treponema sp. OMZ 838 #=GS A0A0A0X1Z2/11-164 DE Crossover junction endodeoxyribonuclease RuvC #=GS A0A0A0X1Z2/11-164 DR GENE3D; d4e12332063b3dc95267bced2c134d02/11-164; #=GS A0A0A0X1Z2/11-164 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema sp. OMZ 838; #=GS A0A0A0X1Z2/11-164 DR EC; 3.1.22.4; #=GS S5ZK09/9-163 AC S5ZK09 #=GS S5ZK09/9-163 OS Treponema pedis str. T A4 #=GS S5ZK09/9-163 DE Crossover junction endodeoxyribonuclease RuvC #=GS S5ZK09/9-163 DR GENE3D; da0f18f143067b7f62363b40aca468f0/9-163; #=GS S5ZK09/9-163 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema pedis; #=GS S5ZK09/9-163 DR EC; 3.1.22.4; #=GS S3LEZ0/1-151 AC S3LEZ0 #=GS S3LEZ0/1-151 OS Treponema vincentii F0403 #=GS S3LEZ0/1-151 DE Crossover junction endodeoxyribonuclease RuvC #=GS S3LEZ0/1-151 DR GENE3D; eaddc91b79fac6e5e53a74444595073a/1-151; #=GS S3LEZ0/1-151 DR ORG; Bacteria; Spirochaetes; Spirochaetia; Spirochaetales; Spirochaetaceae; Treponema; Treponema vincentii; #=GS S3LEZ0/1-151 DR EC; 3.1.22.4; #=GF TC 177.5 1.3E-55 #=GF SQ 16 C8PSB6/11-163 VIMGIDPGLASTGYGIIAVTGSRMRCIDYGVIQTEAGQIQGNRLLIVFDRLTELIRAYHPIAAGIETLYFAKNVTSALSVSEARGVTLLALAQAGVPVFQYAPNAIKKAVTGIAQAEKQQVQLTVQLLLGLKTIPKPDHAADALAAAITYVNN-- A0A0E2E8G2/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLLQGERLLKIFDRVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD M2CE54/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLLQGERLLKIFDKVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD Q73LJ8/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLLQGERLLKIFDKVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD E9S3T8/1-94 --------MANTGYGIISFSNNRFECIEYGSISTEPHLLQGERLLKIFDRVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGG--------------------GEGRRVC--------------------------------- M2SI31/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLVQGERLLKIFDRVAALIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD A0A0F6MSK3/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLVQGERLLKIFDKVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD A0A088RFA5/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLLQGERLLKIFDRVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD A0A0E2E8F6/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLLQGERLLKIFDRVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD S3K8L8/11-165 IIMGIDPGLASTGYGIIAVSGSRMRCIEYGVIQTEAGQVQGNRLLIVFDRLTELIRTYQPAAAGIETLYFAKNVTSALSVSEARGVTLLALAQAGVPVFQYAPNAIKKAVTGIAQAEKQQVQLTVQLLLGLKAIPKPDHAADALAAAITYVNTVP M2BD76/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLLQGERLLKIFDKVSALIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD S3KP01/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTESHLLQGERLLKIFDKVSALIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD M2BK38/16-170 CVIGIDPGLANTGYGIISFSNNRFECIEYGSISTEPHLLQGERLLKIFDRVSELIEKYRPKEAGIETLYFAKNATSAMSVSEARGVVLLALAQGGVRVGEYAPNSIKKAVTGIAQAEKRQVQEAVKLILGLKEIPRPDHAADALAAAITKINLGD A0A0A0X1Z2/11-164 IIMGIDPGLASTGYGIITVSGSRMRCIDYGVIQTEAGQVQGDRLLIVFDRLTELIRTYQPAAAGIETLYFAKNVTSALSVSEARGVTLLALAQAGVPVFQYAPNAIKKAVTGIAQAEKQQVQLTVQLLLGLKTIPKPDHAADALAAAITYVNTV- S5ZK09/9-163 CVIGIDPGLANTGYGIIKFSQNKFKCIEYGSITTASNMPQGERLLIIFNKISELVKKYKPAEAGIETVYFAKNVTSAITVSEAKGVVLLALAQNGISVSEYAPNAIKKAVTGIAQAEKAQVQNAVKIILGLAAVPKPDHAADALAAAITKINLGD S3LEZ0/1-151 --MGIDPGLASTGYGIIAVTGSRMRCIDYGVIQTEAGQIQGNRLLIVFDRLTELIRAYHPIAAGIETLYFAKNVTSALSVSEARGVTLLALAQAGVPVFQYAPNAIKKAVTGIAQAEKQQVQLTVQLLLGLKTIPKPDHAADALAAAITYVNN-- #=GC scorecons 23455555796999999567568659979959597555599699947987667985596945999998999996999689999899699999959535245555355555555557965796245454555535545555555555555345322 #=GC scorecons_70 ________*********__*_**__*****_*_**____******_*****_***__*_*__***********_************_******_*____________________***_***_________________________________ #=GC scorecons_80 ________**_******__*__*__*****_*_**____**_***_****__***__*_*__***********_***_********_******_*_____________________*__**__________________________________ #=GC scorecons_90 _________*_******_____*__**_**_*_*_____**_***__**____**__*_*__***********_***_********_******_*_____________________*___*__________________________________ //