# STOCKHOLM 1.0 #=GF ID 2.60.40.10/FF/137387 #=GF DE Protein VERNALIZATION INSENSITIVE 3 #=GF AC 2.60.40.10/FF/137387 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 81.860 #=GS Q9FIE3/308-412 AC Q9FIE3 #=GS Q9FIE3/308-412 OS Arabidopsis thaliana #=GS Q9FIE3/308-412 DE Protein VERNALIZATION INSENSITIVE 3 #=GS Q9FIE3/308-412 DR GENE3D; 4a94aa7dcd048ca51af9c7fdd1f8d443/308-412; #=GS Q9FIE3/308-412 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9FIE3/308-412 DR GO; GO:0001666; GO:0005515; GO:0005634; GO:0005677; GO:0009409; GO:0010048; GO:0016607; GO:0045814; GO:0051571; GO:0061087; GO:0070417; #=GS Q9SUM4/356-462 AC Q9SUM4 #=GS Q9SUM4/356-462 OS Arabidopsis thaliana #=GS Q9SUM4/356-462 DE VIN3-like protein 2 #=GS Q9SUM4/356-462 DR GENE3D; e2c6b18d4451f725c1558c522ab7e05e/356-462; #=GS Q9SUM4/356-462 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q9SUM4/356-462 DR GO; GO:0005515; GO:0005677; GO:0009409; GO:0009506; GO:0031519; GO:0032922; GO:0035064; GO:0042802; GO:0048587; GO:1900111; #=GS Q5BPT4/307-433 AC Q5BPT4 #=GS Q5BPT4/307-433 OS Arabidopsis thaliana #=GS Q5BPT4/307-433 DE VIN3-like protein 3 #=GS Q5BPT4/307-433 DR GENE3D; a40c25fadd306a980e1e4d2a3731426d/307-433; #=GS Q5BPT4/307-433 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS Q5BPT4/307-433 DR GO; GO:0009409; GO:0070417; #=GS A0A178UF19/308-412 AC A0A178UF19 #=GS A0A178UF19/308-412 OS Arabidopsis thaliana #=GS A0A178UF19/308-412 DE VIN3 #=GS A0A178UF19/308-412 DR GENE3D; 4a94aa7dcd048ca51af9c7fdd1f8d443/308-412; #=GS A0A178UF19/308-412 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; #=GS V4MFZ7/351-460 AC V4MFZ7 #=GS V4MFZ7/351-460 OS Eutrema salsugineum #=GS V4MFZ7/351-460 DE Uncharacterized protein #=GS V4MFZ7/351-460 DR GENE3D; 10db4501751b761cfd1f653ed89a65fe/351-460; #=GS V4MFZ7/351-460 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; #=GS A0A078IQI3/318-422 AC A0A078IQI3 #=GS A0A078IQI3/318-422 OS Brassica napus #=GS A0A078IQI3/318-422 DE BnaAnng10940D protein #=GS A0A078IQI3/318-422 DR GENE3D; 14a30141feea2c0ad17100adee31ac37/318-422; #=GS A0A078IQI3/318-422 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078C0H7/315-427 AC A0A078C0H7 #=GS A0A078C0H7/315-427 OS Brassica napus #=GS A0A078C0H7/315-427 DE BnaC01g08200D protein #=GS A0A078C0H7/315-427 DR GENE3D; 2bdafa03a23ea1757f8759a609d9b132/315-427; #=GS A0A078C0H7/315-427 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078FMT5/285-397 AC A0A078FMT5 #=GS A0A078FMT5/285-397 OS Brassica napus #=GS A0A078FMT5/285-397 DE BnaA08g13150D protein #=GS A0A078FMT5/285-397 DR GENE3D; 39b5d62cfcfde2c42127e86586741f4c/285-397; #=GS A0A078FMT5/285-397 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A078ESB9/305-416 AC A0A078ESB9 #=GS A0A078ESB9/305-416 OS Brassica napus #=GS A0A078ESB9/305-416 DE BnaC03g68030D protein #=GS A0A078ESB9/305-416 DR GENE3D; 4e97535d7316c888d3703daa5058fd9a/305-416; #=GS A0A078ESB9/305-416 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS M4E5P3/323-430 AC M4E5P3 #=GS M4E5P3/323-430 OS Brassica rapa subsp. pekinensis #=GS M4E5P3/323-430 DE Uncharacterized protein #=GS M4E5P3/323-430 DR GENE3D; 69b974eca0e1eaeace8fa1b938e5ca1e/323-430; #=GS M4E5P3/323-430 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS M4D1E8/321-433 AC M4D1E8 #=GS M4D1E8/321-433 OS Brassica rapa subsp. pekinensis #=GS M4D1E8/321-433 DE Uncharacterized protein #=GS M4D1E8/321-433 DR GENE3D; 8d83bd6c3ae8c01834b54fdc12833312/321-433; #=GS M4D1E8/321-433 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A078C5V9/321-431 AC A0A078C5V9 #=GS A0A078C5V9/321-431 OS Brassica napus #=GS A0A078C5V9/321-431 DE BnaC07g42420D protein #=GS A0A078C5V9/321-431 DR GENE3D; 8edb13bbc6ba1316f5fa3f4c8ec42cbb/321-431; #=GS A0A078C5V9/321-431 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A0D3A369/345-456 AC A0A0D3A369 #=GS A0A0D3A369/345-456 OS Brassica oleracea var. oleracea #=GS A0A0D3A369/345-456 DE Uncharacterized protein #=GS A0A0D3A369/345-456 DR GENE3D; ad4cd245b18f992bc76f313cf91e007e/345-456; #=GS A0A0D3A369/345-456 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS A0A087GI83/330-436 AC A0A087GI83 #=GS A0A087GI83/330-436 OS Arabis alpina #=GS A0A087GI83/330-436 DE Vernalization5 vin3-like protein #=GS A0A087GI83/330-436 DR GENE3D; b936682ba33adedab6d9a53ab38d08ba/330-436; #=GS A0A087GI83/330-436 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; #=GS D7MC72/358-467 AC D7MC72 #=GS D7MC72/358-467 OS Arabidopsis lyrata subsp. lyrata #=GS D7MC72/358-467 DE Putative uncharacterized protein #=GS D7MC72/358-467 DR GENE3D; b959c3cb8014232bae9fa09bb31946e0/358-467; #=GS D7MC72/358-467 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; #=GS M4D3W9/327-437 AC M4D3W9 #=GS M4D3W9/327-437 OS Brassica rapa subsp. pekinensis #=GS M4D3W9/327-437 DE Uncharacterized protein #=GS M4D3W9/327-437 DR GENE3D; b9aa023a11d27584141f84a5d5f203e2/327-437; #=GS M4D3W9/327-437 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; #=GS A0A1J3IG04/349-459 AC A0A1J3IG04 #=GS A0A1J3IG04/349-459 OS Noccaea caerulescens #=GS A0A1J3IG04/349-459 DE VIN3-like protein 2 #=GS A0A1J3IG04/349-459 DR GENE3D; bf413131809b038ec116d757e250f376/349-459; #=GS A0A1J3IG04/349-459 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Coluteocarpeae; Noccaea; Noccaea caerulescens; #=GS R0F403/355-461 AC R0F403 #=GS R0F403/355-461 OS Capsella rubella #=GS R0F403/355-461 DE Uncharacterized protein #=GS R0F403/355-461 DR GENE3D; c13084b0efee704615092e9f5eb449bc/355-461; #=GS R0F403/355-461 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS R0GV01/342-449 AC R0GV01 #=GS R0GV01/342-449 OS Capsella rubella #=GS R0GV01/342-449 DE Uncharacterized protein #=GS R0GV01/342-449 DR GENE3D; d99ba83ff86f46c8fc0486e3e527c1ac/342-449; #=GS R0GV01/342-449 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; #=GS A0A0D3DGY3/321-431 AC A0A0D3DGY3 #=GS A0A0D3DGY3/321-431 OS Brassica oleracea var. oleracea #=GS A0A0D3DGY3/321-431 DE Uncharacterized protein #=GS A0A0D3DGY3/321-431 DR GENE3D; db1dff54cd3dcb89e9fa13180e362e6c/321-431; #=GS A0A0D3DGY3/321-431 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GS A0A078GU42/327-437 AC A0A078GU42 #=GS A0A078GU42/327-437 OS Brassica napus #=GS A0A078GU42/327-437 DE BnaA01g06810D protein #=GS A0A078GU42/327-437 DR GENE3D; e4a80fb6c32f824b3ba559b71f2517ee/327-437; #=GS A0A078GU42/327-437 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; #=GS A0A0D3BM80/338-448 AC A0A0D3BM80 #=GS A0A0D3BM80/338-448 OS Brassica oleracea var. oleracea #=GS A0A0D3BM80/338-448 DE Uncharacterized protein #=GS A0A0D3BM80/338-448 DR GENE3D; f14cd7a356b03c0e4d0a3ccf52efade2/338-448; #=GS A0A0D3BM80/338-448 DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica oleracea; Brassica oleracea var. oleracea; #=GF TC 140.8 1.7E-44 #=GF SQ 22 Q9FIE3/308-412 --------SVSGQGDKMTVRVEEIQARSVTVRVDSEEPSSSTQNKITGFRLFCRKSKDEECSSQGNCVVYLPET--TSAIQGLEPDTEFCLRVVSFNEEGDLDESELRFTT--LKDD--------------------- Q9SUM4/356-462 ---NEISADTATTGS-TKIRFEDVNATSLTVVLASNEIPSPP--NIVHYSIWHRKVPEKDYPEKSTCTLFIPNT--RFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAE----------------------- Q5BPT4/307-433 --------PSTIQGS-MKIRIESVLATSVTFDIEAEESFSWG--DTNHYRMVYRKVSEKHSSKDLTRELFSTSSHQRFTVMELTPATEYWFKIVSFSGVEELSVDEFIVSTKTLQDEEVAAVLLNMSNCNNANKMEKS A0A178UF19/308-412 --------SVSGQGDKMTVRVEEIQARSVTVRVDSEEPSSSTQNKITGFRLFCRKSKDEECSSQGNCVVYLPET--TSAIQGLEPDTEFCLRVVSFNEEGDLDESELRFTT--LKDD--------------------- V4MFZ7/351-460 ---NEISADTATTVS-TKIRFEDVNATSLTVVLASNEVGSPA--NIVHYSIWHRKVTEKDYPEKSTCTLFTPNT--RFVVSGLAPASEYCFKVVSFSGTREVSVDEINVLTRSSPEEG-------------------- A0A078IQI3/318-422 --------DTA---P-TKIRFEDVNATSLTVILASNDLTSPA--NIVHYSIWHRKVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSFSGTREVGVDEINVLTRSSPEEVVER----------------- A0A078C0H7/315-427 --SSKMQHDTATTVS-TKIRFEDVNATSLTVILASNEVTSPS--NIVHYSIWHRMVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSYSGTRELGVDEISVLTRNEEERSES------------------ A0A078FMT5/285-397 ------SADTATTVPPTKIRFEDVNATSLTVILASNEVDSPA--NIVHYSIWHRKVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSFSGTRELGVDVINVVTRSPEERSESPL---------------T A0A078ESB9/305-416 ------SADTATTVPPTKIRFEDVNATSLTVILASNEVASPA--NIVHYSIWHRKVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSFSGTRELGVDVINVLTRGPEERSESPL---------------- M4E5P3/323-430 -----VSADTA---P-TKIRFEDVNATSLTVILASNDLTSPA--NIVHYSIWHRKVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSFSGTREVGVDEINVLTRSSPEEVVER----------------- M4D1E8/321-433 ------SADTATTVPPTKIRFEDVNATSLTVILASNEVDSPA--NIVHYSIWHRKVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSFSGTREMGVDVINVMTRGPEERSESPL---------------T A0A078C5V9/321-431 -LSNEVSVDT----P-TKIRFEDVNATSLTVILASNDLTSPA--NIVHYSIWHRKVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSFSGTREVGVDEINVLTRSSPEEVVER----------------- A0A0D3A369/345-456 ---NEVSADTATTVS-TKIRFEDVNATSLTVILASNEVTSPS--NIVHYSIWHRMVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSYSGTRELGVDEISVLTRNEEERSES------------------ A0A087GI83/330-436 ---NEISADTATTVS-TKIRFEDVNTTSLTVILASNEVASPA--NIVHYSIWHRKVSEKEYQEKSTCTLFTPNT--RFVVSGLAPASEYCFKVVSFSGTREMGIDEISVMTRSPE----------------------- D7MC72/358-467 ------SADTATTGS-TKIRFEDVNATSLTVVLASNEIPSPP--NIVHYSIWHRKVPEKDYPEKSTCTLFTPNT--RFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAEEGANCS----------------- M4D3W9/327-437 ---NEVSADTATTVS-TKIRFEDVNATSLTVILASNEVTSPG--NIVHYSIWHRKATEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSYSGTRELGVDEINVLTRNEEERSE------------------- A0A1J3IG04/349-459 GLSNEISADTATTVSTTKIRFEDVNATSLTVVLASNEVASPA--NIVHYSIWHRKASEKDYPEKSTCTLFTPNT--RFVVSGLAPASEYCFKVVSFSGTRELGVDEINVLTRSPE----------------------- R0F403/355-461 ---NEISADTATTGS-TKIRFEDVNATSLTVVLASNNIPSPP--NIVHYSIWHRKVPEKDYPEKSTCTLFTPNT--RFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAE----------------------- R0GV01/342-449 --SSKMQQDTATTGS-TKIRFEDVNATSLTVVLASNNIPSPP--NIVHYSIWHRKVPEKDYPEKSTCTLFTPNT--RFVVSGLAPASEYCFKVVSYSGTREMGVDEINVLTRSAE----------------------- A0A0D3DGY3/321-431 -LSNEVSVDT----P-TKIRFEDVNATSLTVILASNDLTSPA--NIVHYSIWHRKVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSFSGTREVGVDEINVLTRSSPEEVVER----------------- A0A078GU42/327-437 ---NEVSADTATTVS-TKIRFEDVNATSLTVILASNEVTSPG--NIVHYSIWHRKATEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSYSGTRELGVDEINVLTRNEEERSE------------------- A0A0D3BM80/338-448 ------SADTATTVPPTKIRFEDVNATSLTVILASSEVASPA--NIVHYSIWHRKVTEKEYQEKSTCTLFTPNA--RFVVSGLAPASEYCFKVVSFSGTRELGVDVIKVLTRGPEERSESP----------------- #=GC scorecons 000111325653435066796967586969746576743954006756766569764776645657757757650066675796966977778997775676666764659533443111000000000000000000 #=GC scorecons_70 ________________****_***_******_*_***__*____**_**_*_***__****__*_**_**_**___****_**_**************__*__****_*_*___________________________ #=GC scorecons_80 __________________**_*_*_*_*_**___*_*__*_____*__*____**__*________*_**_*_______*_**_*__*********____*_________*___________________________ #=GC scorecons_90 ___________________*_*___*_*_*_________*_____________*____________________________*_*__*____***_______________*___________________________ //