# STOCKHOLM 1.0 #=GF ID 2.60.40.10/FF/137346 #=GF DE Oncorhynchus mykiss genomic scaffold, scaffold_597 #=GF AC 2.60.40.10/FF/137346 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 90.489 #=GS B1B0C7/1860-1950 AC B1B0C7 #=GS B1B0C7/1860-1950 OS Mus musculus #=GS B1B0C7/1860-1950 DE Basement membrane-specific heparan sulfate proteoglycan core protein #=GS B1B0C7/1860-1950 DR GENE3D; 92b352412a0687598d12665f63e58f6c/1860-1950; #=GS B1B0C7/1860-1950 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS E9PZ16/1860-1950 AC E9PZ16 #=GS E9PZ16/1860-1950 OS Mus musculus #=GS E9PZ16/1860-1950 DE Basement membrane-specific heparan sulfate proteoglycan core protein #=GS E9PZ16/1860-1950 DR GENE3D; cf829b97a496fa6948bf02b59efcf83d/1860-1950; #=GS E9PZ16/1860-1950 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Mammalia; Euarchontoglires; Rodentia; Myomorpha; Muridae; Murinae; Mus; Mus; Mus musculus; #=GS A4JYL6/16-117 AC A4JYL6 #=GS A4JYL6/16-117 OS Danio rerio #=GS A4JYL6/16-117 DE Sid4 #=GS A4JYL6/16-117 DR GENE3D; 093dca57a46ef8d3660cabd0683fd7bb/16-117; #=GS A4JYL6/16-117 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Cypriniphysae; Cypriniformes; Cyprinoidea; Cyprinidae; Danio; Danio rerio; #=GS A4JYL6/16-117 DR GO; GO:0005515; GO:0009653; GO:0042802; GO:0050840; #=GS A0A0B4J1A7/17-113 AC A0A0B4J1A7 #=GS A0A0B4J1A7/17-113 OS Danio rerio #=GS A0A0B4J1A7/17-113 DE Secreted immunoglobulin domain 4 #=GS A0A0B4J1A7/17-113 DR GENE3D; e29abb8f7dfd3ab718681e16eba4de77/17-113; #=GS A0A0B4J1A7/17-113 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Cypriniphysae; Cypriniformes; Cyprinoidea; Cyprinidae; Danio; Danio rerio; #=GS A0A0B4J1A7/17-113 DR GO; GO:0005515; GO:0009653; GO:0042802; GO:0050840; #=GS A0A146MZK8/16-114 AC A0A146MZK8 #=GS A0A146MZK8/16-114 OS Fundulus heteroclitus #=GS A0A146MZK8/16-114 DE Basement membrane-specific heparan sulfate proteoglycan core protein #=GS A0A146MZK8/16-114 DR GENE3D; 1517e98d0133027de88f0715eaed2953/16-114; #=GS A0A146MZK8/16-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; #=GS A0A146N013/1-87 AC A0A146N013 #=GS A0A146N013/1-87 OS Fundulus heteroclitus #=GS A0A146N013/1-87 DE Basement membrane-specific heparan sulfate proteoglycan core protein #=GS A0A146N013/1-87 DR GENE3D; 224b480caeacfd66c75e6b3d6d1f0b12/1-87; #=GS A0A146N013/1-87 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; #=GS A0A147A510/16-114 AC A0A147A510 #=GS A0A147A510/16-114 OS Fundulus heteroclitus #=GS A0A147A510/16-114 DE Basement membrane-specific heparan sulfate proteoglycan core protein #=GS A0A147A510/16-114 DR GENE3D; 3a02382f7e50b129e3cef207a127c4e4/16-114; #=GS A0A147A510/16-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; #=GS A0A087X531/16-111 AC A0A087X531 #=GS A0A087X531/16-111 OS Poecilia formosa #=GS A0A087X531/16-111 DE Uncharacterized protein #=GS A0A087X531/16-111 DR GENE3D; 72d8a68f280a160bcdba42c568f53247/16-111; #=GS A0A087X531/16-111 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Poecilia; Poecilia formosa; #=GS A0A146N153/16-114 AC A0A146N153 #=GS A0A146N153/16-114 OS Fundulus heteroclitus #=GS A0A146N153/16-114 DE Basement membrane-specific heparan sulfate proteoglycan core protein #=GS A0A146N153/16-114 DR GENE3D; 92e58b2865c8adf6b6c002eef309a49a/16-114; #=GS A0A146N153/16-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; #=GS M4AC12/15-114 AC M4AC12 #=GS M4AC12/15-114 OS Xiphophorus maculatus #=GS M4AC12/15-114 DE Uncharacterized protein #=GS M4AC12/15-114 DR GENE3D; 97cc52dffa843a3e72591ed3c193b314/15-114; #=GS M4AC12/15-114 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus; Xiphophorus maculatus; #=GS H2MJH9/14-115 AC H2MJH9 #=GS H2MJH9/14-115 OS Oryzias latipes #=GS H2MJH9/14-115 DE Uncharacterized protein #=GS H2MJH9/14-115 DR GENE3D; feb36723457c48ddd38b34771534988e/14-115; #=GS H2MJH9/14-115 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GS I3KHI2/16-112 AC I3KHI2 #=GS I3KHI2/16-112 OS Oreochromis niloticus #=GS I3KHI2/16-112 DE Uncharacterized protein #=GS I3KHI2/16-112 DR GENE3D; f5c3f71727caefe71df891cb05041d38/16-112; #=GS I3KHI2/16-112 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Cichlomorphae; Cichliformes; Cichlidae; Pseudocrenilabrinae; Oreochromini; Oreochromis; Oreochromis niloticus; #=GS Q4RZV7/13-107 AC Q4RZV7 #=GS Q4RZV7/13-107 OS Tetraodon nigroviridis #=GS Q4RZV7/13-107 DE Chromosome 18 SCAF14786, whole genome shotgun sequence #=GS Q4RZV7/13-107 DR GENE3D; 50a0ea0c3f80829228359938d2ddd03a/13-107; #=GS Q4RZV7/13-107 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Tetraodontiformes; Tetraodontoidei; Tetradontoidea; Tetraodontidae; Tetraodon; Tetraodon nigroviridis; #=GS A0A060X178/273-373 AC A0A060X178 #=GS A0A060X178/273-373 OS Oncorhynchus mykiss #=GS A0A060X178/273-373 DE Uncharacterized protein #=GS A0A060X178/273-373 DR GENE3D; c0cb0693c1787d840d4537b7982800f8/273-373; #=GS A0A060X178/273-373 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus; Oncorhynchus mykiss; #=GS H2MMH3/2916-3009 AC H2MMH3 #=GS H2MMH3/2916-3009 OS Oryzias latipes #=GS H2MMH3/2916-3009 DE Uncharacterized protein #=GS H2MMH3/2916-3009 DR GENE3D; 9a08ceafb49ab627812c876a7844c153/2916-3009; #=GS H2MMH3/2916-3009 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes; #=GF TC 120.4 1.7E-38 #=GF SQ 15 B1B0C7/1860-1950 ----GTSTAPVASIHPPQLTVQPGQQAEFRCSAT---GNPTP-MLEWIGGPSGQLPAKAQI--HNGILRLPAIEPSDQGQYLCRALSSAGQHVARAMLQVH------- E9PZ16/1860-1950 ----GTSTAPVASIHPPQLTVQPGQQAEFRCSAT---GNPTP-MLEWIGGPSGQLPAKAQI--HNGILRLPAIEPSDQGQYLCRALSSAGQHVARAMLQVH------- A4JYL6/16-117 ---AVCAQAPSVSVRPRTAAVRLGETVSFQCRVT---SGAQPVMLEWRKINNQPLGDNVKIGPDGAVLTIANVRLNNQGGYRCIATNAQGKSTVTANLSVKHPPKVRV A0A0B4J1A7/17-113 ---AVCAQAPSVSVRPRTAAVRLGETVSFQCRVT---SGAQPVMLEWRKINNQPLGDNVKIGPDGAVLTIANVRLNNQGGYRCIATNAQGKSTVTANLSVKHP----- A0A146MZK8/16-114 ---SVATQAPVVTVEPRTATIRQGESVSYRCQVK---SSVQPVRLEWRKGNNQALEDNVKIGPDGSVLTVANARPGNHGQYRCVAISTAGRSFGNAVLNVKYPPK--- A0A146N013/1-87 ---------------PRTATIRQGESVSYRCQVK---SSVQPVRLEWRKGNNQALEDNVKIGPDGSVLTVANARPGNHGQYRCVAISTAGRSFGNAVLNVKYPPK--- A0A147A510/16-114 ---SVATQAPVVTVEPRTATIRQGESVSYRCQVK---SSVQPVRLEWRKGNNQALEDNVKIGPDGSVLTVANARPGNHGQYRCVAISTAGRSFGNAVLNVKYPPK--- A0A087X531/16-111 ---SVAAQAPVVTVEPRTATIRQGESVSFRCQVK---SNVQPVQLEWRRANNQALPDNVKIGPDGSVLTVANARPGNHGQYRCVANSAAGRNFANIVLNVKF------ A0A146N153/16-114 ---SVATQAPVVTVEPRTATIRQGEAVSYRCQVK---SSVQPVRLEWRKGNNQALEDNVKIGPDGSVLTVANARPGNHGQYRCVAISTAGRSFGNAVLNVKYPPK--- M4AC12/15-114 --CSVAAQAPVITVEPRTATIRQGESVSYRCHVK---SNVQPVQLEWRRANNQALPDNVKIGPDGSVLTVANARPGNHGQYRCVAISAAGRSFANVVLNVKYPSK--- H2MJH9/14-115 -VHAVSAQAPVVFVEPKAATVRQGETVSFRCQVR---SSVQPVNLEWTRANNQALADNIKVGPEGSVLTVSNARPLNQGQYRCVAVSSAGRGAASAVLNVKHPPKL-- I3KHI2/16-112 ---SVAGQAPVISVEPRAATVHKGESVSFRCIVKLTDSNSRPLEVQWKKANNQALPDNVKVGPDGSVLTVVNAVPGNHGQYRCVVSSAAGRSTANVMLTV-------- Q4RZV7/13-107 LVCSVASQT-VISVEPRAATVRQGESVSFRCQVG---SGAVG-SVEWRRTNNQPLQDNVKIGPGGSVLTISNARPGNQGQYRCTLHTAAGRSVATAALNV-------- A0A060X178/273-373 ---SAGLQTPIISIEPHSAAVRKGESASFKCRVY---SGAQPVRLEWKLSNNQPLPDNVKIDHYGSVLIITDARPSNQGTYRCVASNLFGITQSLVSLIVRESPVAN- H2MMH3/2916-3009 -------QSPIIAIEPHSAAVEEGKSTSFRCKVY---GGAEPVKLEWKMANNQPLPVNAKVSPDGSVLTITNARRENYGPYRCIASNLFGVTQSIVSLIVKVSP---- #=GC scorecons 000243355654464954667649656677947300064448437894446764945767745566796646666476959694736459443436494941221000 #=GC scorecons_70 _________*_____*__***__**__****_*____*___*__***___***_*__****___*_**___*__*_*_*_***_*____*_______*_*________ #=GC scorecons_80 _______________*____*__*____***__________*__***_______*____**_____**________*_*_*_*_*____*_______*_*________ #=GC scorecons_90 _______________*_______*______*______________**_______*____________*__________*_*_*______*_______*_*________ //