# STOCKHOLM 1.0 #=GF ID 1.10.10.10/FF/266084 #=GF DE 26S proteasome regulatory subunit #=GF AC 1.10.10.10/FF/266084 #=GF TP FunFam #=GF DR CATH: 4.2 #=GF DR DOPS: 82.768 #=GS A8HVA6/359-415 AC A8HVA6 #=GS A8HVA6/359-415 OS Chlamydomonas reinhardtii #=GS A8HVA6/359-415 DE 26S proteasome regulatory subunit #=GS A8HVA6/359-415 DR GENE3D; d3ed91cfc79cc79b588360eba8a004f7/359-415; #=GS A8HVA6/359-415 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas; Chlamydomonas reinhardtii; #=GS U9TZX4/1-57 AC U9TZX4 #=GS U9TZX4/1-57 OS Rhizophagus irregularis DAOM 181602 #=GS U9TZX4/1-57 DE Uncharacterized protein #=GS U9TZX4/1-57 DR GENE3D; 09dad108b5312be7a0cc8cc8642bd405/1-57; #=GS U9TZX4/1-57 DR ORG; Eukaryota; Fungi; Mucoromycota; Glomeromycotina; Glomeromycetes; Glomerales; Glomeraceae; Rhizophagus; Rhizophagus irregularis; #=GS K1R4I2/178-235 AC K1R4I2 #=GS K1R4I2/178-235 OS Crassostrea gigas #=GS K1R4I2/178-235 DE 26S proteasome non-ATPase regulatory subunit 3 #=GS K1R4I2/178-235 DR GENE3D; 0b473c5ac50ba64cf092d129d7b39dba/178-235; #=GS K1R4I2/178-235 DR ORG; Eukaryota; Metazoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea; Crassostrea gigas; #=GS A0A150GQA6/362-418 AC A0A150GQA6 #=GS A0A150GQA6/362-418 OS Gonium pectorale #=GS A0A150GQA6/362-418 DE Uncharacterized protein #=GS A0A150GQA6/362-418 DR GENE3D; 54db071b14935b28a0f8c6f63d5ec584/362-418; #=GS A0A150GQA6/362-418 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Gonium; Gonium pectorale; #=GS A0A0H5R5A4/374-432 AC A0A0H5R5A4 #=GS A0A0H5R5A4/374-432 OS Spongospora subterranea #=GS A0A0H5R5A4/374-432 DE Uncharacterized protein #=GS A0A0H5R5A4/374-432 DR GENE3D; 6015f6c270519181c125c845e802808d/374-432; #=GS A0A0H5R5A4/374-432 DR ORG; Eukaryota; Plasmodiophoridae; Spongospora; Spongospora subterranea; #=GS A0A146YDB7/416-466 AC A0A146YDB7 #=GS A0A146YDB7/416-466 OS Fundulus heteroclitus #=GS A0A146YDB7/416-466 DE 26S proteasome non-ATPase regulatory subunit 3 #=GS A0A146YDB7/416-466 DR GENE3D; 64aa12e555dafc6bda09ae365e4907d3/416-466; #=GS A0A146YDB7/416-466 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Fundulidae; Fundulus; Fundulus heteroclitus; #=GS A0A077ZV58/350-406 AC A0A077ZV58 #=GS A0A077ZV58/350-406 OS Stylonychia lemnae #=GS A0A077ZV58/350-406 DE Probable 26s proteasome non-atpase regulatory subunit 3-like #=GS A0A077ZV58/350-406 DR GENE3D; 67aaf9836082287eee02dcdf38911d33/350-406; #=GS A0A077ZV58/350-406 DR ORG; Eukaryota; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Stylonychinae; Stylonychia; Stylonychia lemnae; #=GS J9HYN3/364-420 AC J9HYN3 #=GS J9HYN3/364-420 OS Oxytricha trifallax #=GS J9HYN3/364-420 DE 26S proteasome non-ATPase regulatory subunit 3 #=GS J9HYN3/364-420 DR GENE3D; 718233d2e6cbc632fb3d1eb8efbcbb2a/364-420; #=GS J9HYN3/364-420 DR ORG; Eukaryota; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrichinae; Oxytricha; Oxytricha trifallax; #=GS A0A1I8J5M6/372-428 AC A0A1I8J5M6 #=GS A0A1I8J5M6/372-428 OS Macrostomum lignano #=GS A0A1I8J5M6/372-428 DE Uncharacterized protein #=GS A0A1I8J5M6/372-428 DR GENE3D; 796f478ec88d8131f921f7a782ef1c1e/372-428; #=GS A0A1I8J5M6/372-428 DR ORG; Eukaryota; Metazoa; Platyhelminthes; Macrostomida; Macrostomidae; Macrostomum; Macrostomum lignano; #=GS H3CLZ4/386-449 AC H3CLZ4 #=GS H3CLZ4/386-449 OS Tetraodon nigroviridis #=GS H3CLZ4/386-449 DE Uncharacterized protein #=GS H3CLZ4/386-449 DR GENE3D; 855cb415231cca9e3fb2687e664c36ed/386-449; #=GS H3CLZ4/386-449 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Tetraodontiformes; Tetraodontoidei; Tetradontoidea; Tetraodontidae; Tetraodon; Tetraodon nigroviridis; #=GS A0A090N2M3/360-418 AC A0A090N2M3 #=GS A0A090N2M3/360-418 OS Ostreococcus tauri #=GS A0A090N2M3/360-418 DE 26S proteasome regulatory subunit, C-terminal #=GS A0A090N2M3/360-418 DR GENE3D; acace49a035c9b133e2ede4334de3f39/360-418; #=GS A0A090N2M3/360-418 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus; Ostreococcus tauri; #=GS A0A0G4IKV3/361-420 AC A0A0G4IKV3 #=GS A0A0G4IKV3/361-420 OS Plasmodiophora brassicae #=GS A0A0G4IKV3/361-420 DE Uncharacterized protein #=GS A0A0G4IKV3/361-420 DR GENE3D; b0906cc529c5262139dcf23efd9609c8/361-420; #=GS A0A0G4IKV3/361-420 DR ORG; Eukaryota; Plasmodiophoridae; Plasmodiophora; Plasmodiophora brassicae; #=GS D8TIA8/360-416 AC D8TIA8 #=GS D8TIA8/360-416 OS Volvox carteri f. nagariensis #=GS D8TIA8/360-416 DE 26S proteasome regulatory complex #=GS D8TIA8/360-416 DR GENE3D; b3a7e55be8b1ca3ac823012d2ad12e10/360-416; #=GS D8TIA8/360-416 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox; Volvox carteri; Volvox carteri f. nagariensis; #=GS J4DAN7/381-438 AC J4DAN7 #=GS J4DAN7/381-438 OS Theileria orientalis strain Shintoku #=GS J4DAN7/381-438 DE Uncharacterized protein #=GS J4DAN7/381-438 DR GENE3D; d0684081fb325ad95837ac12b8381ca6/381-438; #=GS J4DAN7/381-438 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Theileriidae; Theileria; Theileria orientalis; #=GS A0A0N4WEL3/321-394 AC A0A0N4WEL3 #=GS A0A0N4WEL3/321-394 OS Haemonchus placei #=GS A0A0N4WEL3/321-394 DE Uncharacterized protein #=GS A0A0N4WEL3/321-394 DR GENE3D; da62b4a90427323bc8feed2f0cf291a9/321-394; #=GS A0A0N4WEL3/321-394 DR ORG; Eukaryota; Metazoa; Nematoda; Chromadorea; Rhabditida; Strongylida; Trichostrongyloidea; Haemonchidae; Haemonchinae; Haemonchus; Haemonchus placei; #=GS H2SAR1/391-451 AC H2SAR1 #=GS H2SAR1/391-451 OS Takifugu rubripes #=GS H2SAR1/391-451 DE Uncharacterized protein #=GS H2SAR1/391-451 DR GENE3D; e585451bdd3bae67a303469028df066d/391-451; #=GS H2SAR1/391-451 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Tetraodontiformes; Tetraodontoidei; Tetradontoidea; Tetraodontidae; Takifugu; Takifugu rubripes; #=GS A4RQF9/313-371 AC A4RQF9 #=GS A4RQF9/313-371 OS Ostreococcus lucimarinus CCE9901 #=GS A4RQF9/313-371 DE Uncharacterized protein #=GS A4RQF9/313-371 DR GENE3D; ec24917a8cc151b1b94e9e739dc0c546/313-371; #=GS A4RQF9/313-371 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus; Ostreococcus 'lucimarinus'; #=GS M4AHQ2/380-450 AC M4AHQ2 #=GS M4AHQ2/380-450 OS Xiphophorus maculatus #=GS M4AHQ2/380-450 DE Uncharacterized protein #=GS M4AHQ2/380-450 DR GENE3D; faa95dffcddfa465d9aa91c1c59c49e6/380-450; #=GS M4AHQ2/380-450 DR ORG; Eukaryota; Metazoa; Chordata; Craniata; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Atherinomorphae; Cyprinodontiformes; Cyprinodontoidei; Poeciliidae; Poeciliinae; Xiphophorus; Xiphophorus maculatus; #=GS K8EZ85/359-430 AC K8EZ85 #=GS K8EZ85/359-430 OS Bathycoccus prasinos #=GS K8EZ85/359-430 DE Unnamed protein product #=GS K8EZ85/359-430 DR GENE3D; 85e8557f5a77ca88c6c7f8eb92eb3d42/359-430; #=GS K8EZ85/359-430 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus; Bathycoccus prasinos; #=GS C1MK11/399-457 AC C1MK11 #=GS C1MK11/399-457 OS Micromonas pusilla CCMP1545 #=GS C1MK11/399-457 DE Predicted protein #=GS C1MK11/399-457 DR GENE3D; 70546eb18577118bc7b9b222a632d712/399-457; #=GS C1MK11/399-457 DR ORG; Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas; Micromonas pusilla; #=GS A0A0A1U6I5/354-412 AC A0A0A1U6I5 #=GS A0A0A1U6I5/354-412 OS Entamoeba invadens IP1 #=GS A0A0A1U6I5/354-412 DE 26S proteasome regulatory subunit S3, putative #=GS A0A0A1U6I5/354-412 DR GENE3D; d2b7c0b360f887d9e970d7cd73c12326/354-412; #=GS A0A0A1U6I5/354-412 DR ORG; Eukaryota; Entamoebidae; Entamoeba; Entamoeba invadens; #=GS L0B0X6/374-432 AC L0B0X6 #=GS L0B0X6/374-432 OS Theileria equi strain WA #=GS L0B0X6/374-432 DE Proteasome regulatory component, putative #=GS L0B0X6/374-432 DR GENE3D; 3b51f012b8246135e690d90c6d47e501/374-432; #=GS L0B0X6/374-432 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Theileriidae; Theileria; Theileria equi; #=GS A7AT48/384-437 AC A7AT48 #=GS A7AT48/384-437 OS Babesia bovis #=GS A7AT48/384-437 DE 26S proteasome non-ATPase regulatory subunit 3 #=GS A7AT48/384-437 DR GENE3D; f82a22b32f19e2cfdf3736492e3b62ad/384-437; #=GS A7AT48/384-437 DR ORG; Eukaryota; Apicomplexa; Aconoidasida; Babesiidae; Babesia; Babesia bovis; #=GS C5LQK0/392-447 AC C5LQK0 #=GS C5LQK0/392-447 OS Perkinsus marinus ATCC 50983 #=GS C5LQK0/392-447 DE 26S proteasome regulatory subunit S3, putative #=GS C5LQK0/392-447 DR GENE3D; 75517c3397aaa85deab732791db50f9a/392-447; #=GS C5LQK0/392-447 DR ORG; Eukaryota; Perkinsida; Perkinsidae; Perkinsus; Perkinsus marinus; #=GS A0A023B9N8/417-473 AC A0A023B9N8 #=GS A0A023B9N8/417-473 OS Gregarina niphandrodes #=GS A0A023B9N8/417-473 DE PCI domain protein #=GS A0A023B9N8/417-473 DR GENE3D; a9abd234a39e37cedf3ac55289e09ef5/417-473; #=GS A0A023B9N8/417-473 DR ORG; Eukaryota; Apicomplexa; Gregarinasina; Eugregarinorida; Gregarinidae; Gregarina; Gregarina niphandrodes; #=GF TC 89.9 9.0E-29 #=GF SQ 25 A8HVA6/359-415 ---------IRIGLRRINLAYSRISLAEIAAKLHLNNAED--------------AEYIVAKAIRDGGIDAVIDHDGG----FMA------- U9TZX4/1-57 ---------------MISLSYSRISLRDICLKLHLDSEKD--------------AEYIVAKAIRDGVIDAIIDHEKG----FMKSKENVD- K1R4I2/178-235 ---------IKTGIRMINLSYSRISLTDIAQKLMLDSPED--------------AEYIVAKAIRDGVIEANIDHEKG----FVQS------ A0A150GQA6/362-418 ---------IRIGLRRINLAYSRISLAEIASKLHLASAED--------------AEYIVAKAIRDGGIDAVIDHEGG----FVA------- A0A0H5R5A4/374-432 --------VIKIGLRKISLSYSRISISDIASKLKLNSVED--------------AEYIIAKAINDGVIDALIDRQKG----FLYS------ A0A146YDB7/416-466 ---------------MISLSYSRISLADIAQKLQLDSPED--------------AEFIVAKAIRDGVIEASINHEKG----FVQ------- A0A077ZV58/350-406 --------VIKFGLKKINISYSKISIKDIAQKLGLDSVDE--------------TEQVVAKAIRDGVIDAIVDHDNM----WM-------- J9HYN3/364-420 --------VIKFGLKKINISYSKISMKDIAAKLSLESIDE--------------TEQVVAKAIRDGVIDAVIDHDNM----WM-------- A0A1I8J5M6/372-428 ---------IKVGVRQVALSYSRISLVAVASKLQLDSAEE--------------AEYVAAKAIRDGVIEATIDHKAG----TLS------- H3CLZ4/386-449 --------IKTAGVRMISLSYSRISLADIAQKLQLDSPED--------------AEFIVAKAIRDGVIEASINHEKR----FVQSKETMD- A0A090N2M3/360-418 ---------IRTGLTRINTAYSKISLADVAEKLGLTSVED--------------AESVVAKAIRDGNVDAVIDHAAK----VMYSK----- A0A0G4IKV3/361-420 --------VIKIGLRKISLSYSRISIAEIASKLSLNSVED--------------AEYIIAKAIKDGVIDALIDRKKG----FVYST----- D8TIA8/360-416 ---------IRIGLRRMNLAYSRISLAEIAAKLHLVSAED--------------AEYIVAKAIRDGGIDAVIDHEGG----FMA------- J4DAN7/381-438 ---------IKCGLRKINVAYSKINLSNVANKLGIKSVEQ--------------TENIIAKAIHDGIIEALIDHENQ----YVQS------ A0A0N4WEL3/321-394 LIVRLRQNVIKTAVKQISLAYSRITIKDIAKKLCMSNEVE--------------TEYMVAKAIADGAIDAVITCDTKDGARFMRSSET--- H2SAR1/391-451 ------------GVRMISLSYSRISLADIAQKLQLDSPED--------------AEFIVAKAIRDGVIEASINHEKG----FVQSKETMDI A4RQF9/313-371 ---------IRTGLTRINTAYSKISLADVAEKLGLPSVED--------------AESVVAKAIRDGNVDAVIDHSAK----VMYSK----- M4AHQ2/380-450 --LALKYNVLLKGVRMISLSYSRISLSDIAQKLQLDSPED--------------AEFIVAKAIRDGVIEASINHEKG----FVQSKETMDI K8EZ85/359-430 ---------IRTGLAKVNVAYSKISLNDIALKLGLQKDVDMNNTTSNNINSEGAIECVVAKAIRDGAVDAQIDFETG----IMTS------ C1MK11/399-457 ---------IRVGLRRISLAYTKIHLTDVASKLGLGKDDD--------------VEWVVAKAVRDGGIDAMIDHDAQ----IMYSK----- A0A0A1U6I5/354-412 -----------TAVRKIYVSYSRIGLKEIQKKLQLETVED--------------TECIVAKCIQDGVIDGVIDHDNQ----TLIGKNT--- L0B0X6/374-432 --------VIKGGLRKINIAYSKIPLSHVASKLGISSVDY--------------TESIISKAIHDGIIEAVIDHDAQ----FVQS------ A7AT48/384-437 ---------------KINLAYSRIPIEKVAQKLGINSVEE--------------TECIIAKAISDGIIEATIHHEEK----YMESKA---- C5LQK0/392-447 ---------IKAGLRGINLSYSKVPMEEVMQKLGLNSREE--------------AAGVVSKAIADGVIDATIDDDGD----FM-------- A0A023B9N8/417-473 ---------IRVGLRKINLAYKRIKLEDIAKILHIQSVPD--------------TESVVAKAIVDGVVNGYIDRDLK----CLV------- #=GC scorecons 0000000004325544856697785636773893746356000000000000006836789885995768386653400004623100000 #=GC scorecons_70 ________________*___****_*__**_**_*_*__*_______________*_******_**_***_***_________________ #=GC scorecons_80 ________________*___****____**_**_*____________________*__*****_**_*_*_*___________________ #=GC scorecons_90 ________________*___*__*_______**______________________*___****_**_____*___________________ //