# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/265712
#=GF DE Rrf2 family transcriptional regulator
#=GF AC 1.10.10.10/FF/265712
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 75.429
#=GS Q48660/1-147      AC Q48660
#=GS Q48660/1-147      OS Lactococcus lactis subsp. lactis Il1403
#=GS Q48660/1-147      DE Putative HTH-type transcriptional regulator YffB
#=GS Q48660/1-147      DR GENE3D; 89db03349be1ff4bb984a97f0e5f6d7d/1-147; 
#=GS Q48660/1-147      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. lactis; 
#=GS P71047/1-142      AC P71047
#=GS P71047/1-142      OS Bacillus subtilis subsp. subtilis str. 168
#=GS P71047/1-142      DE Putative HTH-type transcriptional regulator YwgB
#=GS P71047/1-142      DR GENE3D; ef891215cdb869ec6c0a064d70ff3af5/1-142; 
#=GS P71047/1-142      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS T0V652/1-147      AC T0V652
#=GS T0V652/1-147      OS Lactococcus lactis subsp. lactis bv. diacetylactis str. TIFN2
#=GS T0V652/1-147      DE Rrf2 family transcriptional regulator
#=GS T0V652/1-147      DR GENE3D; 89db03349be1ff4bb984a97f0e5f6d7d/1-147; 
#=GS T0V652/1-147      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. lactis; 
#=GS T0VTT1/1-147      AC T0VTT1
#=GS T0VTT1/1-147      OS Lactococcus lactis subsp. cremoris TIFN1
#=GS T0VTT1/1-147      DE Rrf2 family transcriptional regulator
#=GS T0VTT1/1-147      DR GENE3D; e1c91dbbb41b51d843b23a505d939512/1-147; 
#=GS T0VTT1/1-147      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. cremoris; 
#=GS T0V7D3/1-147      AC T0V7D3
#=GS T0V7D3/1-147      OS Lactococcus lactis subsp. cremoris TIFN3
#=GS T0V7D3/1-147      DE Rrf2 family transcriptional regulator
#=GS T0V7D3/1-147      DR GENE3D; e1c91dbbb41b51d843b23a505d939512/1-147; 
#=GS T0V7D3/1-147      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. cremoris; 
#=GS A0A166ZEI1/1-147  AC A0A166ZEI1
#=GS A0A166ZEI1/1-147  OS Lactococcus lactis subsp. cremoris
#=GS A0A166ZEI1/1-147  DE Rrf2 family transcriptional regulator
#=GS A0A166ZEI1/1-147  DR GENE3D; e1c91dbbb41b51d843b23a505d939512/1-147; 
#=GS A0A166ZEI1/1-147  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. cremoris; 
#=GS T0S563/1-147      AC T0S563
#=GS T0S563/1-147      OS Lactococcus lactis subsp. cremoris TIFN6
#=GS T0S563/1-147      DE Rrf2 family transcriptional regulator
#=GS T0S563/1-147      DR GENE3D; e1c91dbbb41b51d843b23a505d939512/1-147; 
#=GS T0S563/1-147      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. cremoris; 
#=GS T0VX39/1-147      AC T0VX39
#=GS T0VX39/1-147      OS Lactococcus lactis subsp. cremoris TIFN7
#=GS T0VX39/1-147      DE Rrf2 family transcriptional regulator
#=GS T0VX39/1-147      DR GENE3D; e1c91dbbb41b51d843b23a505d939512/1-147; 
#=GS T0VX39/1-147      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. cremoris; 
#=GS G8P7T1/1-147      AC G8P7T1
#=GS G8P7T1/1-147      OS Lactococcus lactis subsp. cremoris A76
#=GS G8P7T1/1-147      DE Rrf2 family transcriptional regulator
#=GS G8P7T1/1-147      DR GENE3D; e1c91dbbb41b51d843b23a505d939512/1-147; 
#=GS G8P7T1/1-147      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. cremoris; 
#=GS Q031H1/1-147      AC Q031H1
#=GS Q031H1/1-147      OS Lactococcus lactis subsp. cremoris SK11
#=GS Q031H1/1-147      DE Transcriptional regulator, BadM/Rrf2 family
#=GS Q031H1/1-147      DR GENE3D; e1c91dbbb41b51d843b23a505d939512/1-147; 
#=GS Q031H1/1-147      DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus; Lactococcus lactis; Lactococcus lactis subsp. cremoris; 
#=GS A0A1B2BFR0/1-142  AC A0A1B2BFR0
#=GS A0A1B2BFR0/1-142  OS Bacillus subtilis subsp. subtilis
#=GS A0A1B2BFR0/1-142  DE Transcriptional regulator
#=GS A0A1B2BFR0/1-142  DR GENE3D; ef891215cdb869ec6c0a064d70ff3af5/1-142; 
#=GS A0A1B2BFR0/1-142  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A162R2G6/1-142  AC A0A162R2G6
#=GS A0A162R2G6/1-142  OS Bacillus subtilis
#=GS A0A162R2G6/1-142  DE Rrf2 family transcriptional regulator
#=GS A0A162R2G6/1-142  DR GENE3D; ef891215cdb869ec6c0a064d70ff3af5/1-142; 
#=GS A0A162R2G6/1-142  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS D4G2T9/1-142      AC D4G2T9
#=GS D4G2T9/1-142      OS Bacillus subtilis subsp. natto BEST195
#=GS D4G2T9/1-142      DE Uncharacterized protein
#=GS D4G2T9/1-142      DR GENE3D; ef891215cdb869ec6c0a064d70ff3af5/1-142; 
#=GS D4G2T9/1-142      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. natto; 
#=GS L8AW26/1-142      AC L8AW26
#=GS L8AW26/1-142      OS Bacillus subtilis BEST7613
#=GS L8AW26/1-142      DE Transcriptional regulator
#=GS L8AW26/1-142      DR GENE3D; ef891215cdb869ec6c0a064d70ff3af5/1-142; 
#=GS L8AW26/1-142      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A0A059FXZ0/1-152  AC A0A059FXZ0
#=GS A0A059FXZ0/1-152  OS Hyphomonas hirschiana VP5
#=GS A0A059FXZ0/1-152  DE Rrf2 family protein
#=GS A0A059FXZ0/1-152  DR GENE3D; daa748cc0fb5d04439703f8dd777d3e9/1-152; 
#=GS A0A059FXZ0/1-152  DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas; Hyphomonas hirschiana; 
#=GS Q0C5N0/1-152      AC Q0C5N0
#=GS Q0C5N0/1-152      OS Hyphomonas neptunium ATCC 15444
#=GS Q0C5N0/1-152      DE Rrf2 family protein
#=GS Q0C5N0/1-152      DR GENE3D; daa748cc0fb5d04439703f8dd777d3e9/1-152; 
#=GS Q0C5N0/1-152      DR ORG; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas; Hyphomonas neptunium; 
#=GF TC 224.8 7.7E-71
#=GF SQ 16
Q48660/1-147              MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTPGKNGGFSLNKELHDISFYDVFLAIEGRGRIFQSQGLLQNFIGSESGKA----KRCAITSALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
P71047/1-142              MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLYDVYQAVEGRGSMYQGKGLLQSVFEGES--------HCVLETVMAEIEDKWSNLMREESLQHVMD---RVGELYDLE-
T0V652/1-147              MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTPGKNGGFSLNKELHDISFYDVFLAIEGRGRIFQSQGLLQNFIGSESGKA----KRCAITSALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
T0VTT1/1-147              MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLLDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKA----QHCAITTALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
T0V7D3/1-147              MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLLDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKA----QHCAITTALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
A0A166ZEI1/1-147          MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLLDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKA----QHCAITTALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
T0S563/1-147              MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLLDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKA----QHCAITTALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
T0VX39/1-147              MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLLDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKA----QHCAITTALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
G8P7T1/1-147              MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLLDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKA----QHCAITTALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
Q031H1/1-147              MKLSSGWEQSVYVLLILARLPENRTMSSIALANRLKVSPSYLKKIIKSLVDEGLLRSTTGKNGGFSLNKDLLDISFYDVFLAIEGRGRIFQSQGLLQNFIGAESGKA----QHCAITTALDEIENTLVRTLSNVSLAQVAD---ETQYNYNLGY
A0A1B2BFR0/1-142          MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLYDVYQAVEGRGSMYQGKGLLQSVFEGES--------HCVLETVMAEIEDKWSNLMREESLQHVMD---RVGELYDLE-
A0A162R2G6/1-142          MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLYDVYQAVEGRGSMYQGKGLLQSVFEGES--------HCVLETVMAEIEDKWSNLMREESLQHVMD---RVGELYDLE-
D4G2T9/1-142              MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLYDVYQAVEGRGSMYQGKGLLQSVFEGES--------HCVLETVMAEIEDKWSNLMREESLQHVMD---RVGELYDLE-
L8AW26/1-142              MKMKSGMEQAVSVLLLLSRLPVQASLTSEAISQRLRVSPSYLKKLMRTLVQAGLAESLPGTKGGFTLTKPLADITLYDVYQAVEGRGSMYQGKGLLQSVFEGES--------HCVLETVMAEIEDKWSNLMREESLQHVMD---RVGELYDLE-
A0A059FXZ0/1-152          MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARGASGGYRLARAPEEINLLQIADAVDGGEPAFRCTEIRQR--GPCAAKAEECMKACGIAAAFWAAERIYRQHLEGVRLADIRSALVRKQDSANMER
Q0C5N0/1-152              MRMGEGVEWAAHACLLLSALPDGAGLPAAAIAAFHDVPPAYLAKHMQALARAGIVTSARGASGGYRLARAPEEINLLQIADAVDGGEPAFRCTEIRQR--GPCAAKAEECMKACGIAAAFWAAERIYRQHLEGVRLADIRSALVRKQDSANMER
#=GC scorecons            9764693966656696966994455656496645659696996946659645974494494599749574637956667539779664577546769433645623300002594646653669544454645569557460005454466762
#=GC scorecons_70         ***_**_*__*_*_***_***____*_*_***____********_*__**__**__*__*__***_*_*_*_**_****__******__**__**_*___*__*_________*_*_**__***______*___**__*_*_________**__
#=GC scorecons_80         **___*_*______*_*__**________*______*_*_**_*____*___*___*__*__***_*_*___**____*__*_**____*______*________________*_________*___________*__*____________*__
#=GC scorecons_90         *____*_*______*_*__**________*______*_*_**_*____*___*___*__*__**__*______*_______*__*___________*________________*_________*___________*__________________
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