# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/239661
#=GF DE Plastid RNA polymerase sigma factor
#=GF AC 1.10.10.10/FF/239661
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 2.358
#=GS O48655/350-402      AC O48655
#=GS O48655/350-402      OS Oryza sativa Japonica Group
#=GS O48655/350-402      DE Plastid RNA polymerase sigma factor
#=GS O48655/350-402      DR GENE3D; 9764b05b08854bd84b0d8d7619c04612/350-402; 
#=GS O48655/350-402      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS O48655/350-402      DR GO; GO:0009416; 
#=GS Q7EY07/173-225      AC Q7EY07
#=GS Q7EY07/173-225      OS Oryza sativa Japonica Group
#=GS Q7EY07/173-225      DE Os08g0163400 protein
#=GS Q7EY07/173-225      DR GENE3D; 12557f8d595661b4063e228e0cb9ffae/173-225; 
#=GS Q7EY07/173-225      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS Q0J7T6/351-403      AC Q0J7T6
#=GS Q0J7T6/351-403      OS Oryza sativa Japonica Group
#=GS Q0J7T6/351-403      DE Os08g0163400 protein
#=GS Q0J7T6/351-403      DR GENE3D; 7bafceea3ea77fd049995b816b5aab33/351-403; 
#=GS Q0J7T6/351-403      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A0P0XCX8/248-300  AC A0A0P0XCX8
#=GS A0A0P0XCX8/248-300  OS Oryza sativa Japonica Group
#=GS A0A0P0XCX8/248-300  DE Os08g0163400 protein
#=GS A0A0P0XCX8/248-300  DR GENE3D; ee2414af61d3c56d0da7742861b3db2a/248-300; 
#=GS A0A0P0XCX8/248-300  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A0D3GWN5/277-329  AC A0A0D3GWN5
#=GS A0A0D3GWN5/277-329  OS Oryza barthii
#=GS A0A0D3GWN5/277-329  DE Uncharacterized protein
#=GS A0A0D3GWN5/277-329  DR GENE3D; 1d60c8204a47950c428be14808fce4b3/277-329; 
#=GS A0A0D3GWN5/277-329  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza barthii; 
#=GS A0A0E0EIC5/356-408  AC A0A0E0EIC5
#=GS A0A0E0EIC5/356-408  OS Oryza meridionalis
#=GS A0A0E0EIC5/356-408  DE Uncharacterized protein
#=GS A0A0E0EIC5/356-408  DR GENE3D; 387b330c6ee1f9b8fb4d71f492282e1b/356-408; 
#=GS A0A0E0EIC5/356-408  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS A2YRJ0/203-255      AC A2YRJ0
#=GS A2YRJ0/203-255      OS Oryza sativa Indica Group
#=GS A2YRJ0/203-255      DE Putative uncharacterized protein
#=GS A2YRJ0/203-255      DR GENE3D; 67eecdd737433ebe8d15dd1a2d8ac8e8/203-255; 
#=GS A2YRJ0/203-255      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa; 
#=GS A0A0E0EIC4/356-408  AC A0A0E0EIC4
#=GS A0A0E0EIC4/356-408  OS Oryza meridionalis
#=GS A0A0E0EIC4/356-408  DE Uncharacterized protein
#=GS A0A0E0EIC4/356-408  DR GENE3D; 7a552ee4bb82ab7cc6e39d23c25841d8/356-408; 
#=GS A0A0E0EIC4/356-408  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS A0A0E0I7K5/351-403  AC A0A0E0I7K5
#=GS A0A0E0I7K5/351-403  OS Oryza nivara
#=GS A0A0E0I7K5/351-403  DE Uncharacterized protein
#=GS A0A0E0I7K5/351-403  DR GENE3D; 7bafceea3ea77fd049995b816b5aab33/351-403; 
#=GS A0A0E0I7K5/351-403  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza nivara; 
#=GS A0A0E0QEQ6/351-403  AC A0A0E0QEQ6
#=GS A0A0E0QEQ6/351-403  OS Oryza rufipogon
#=GS A0A0E0QEQ6/351-403  DE Uncharacterized protein
#=GS A0A0E0QEQ6/351-403  DR GENE3D; 7bafceea3ea77fd049995b816b5aab33/351-403; 
#=GS A0A0E0QEQ6/351-403  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza rufipogon; 
#=GS A0A0E0LRL8/361-413  AC A0A0E0LRL8
#=GS A0A0E0LRL8/361-413  OS Oryza punctata
#=GS A0A0E0LRL8/361-413  DE Uncharacterized protein
#=GS A0A0E0LRL8/361-413  DR GENE3D; 81c2597dfe839cf7c18ab5e1eadebdfb/361-413; 
#=GS A0A0E0LRL8/361-413  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza punctata; 
#=GS A0A0E0EIC6/249-301  AC A0A0E0EIC6
#=GS A0A0E0EIC6/249-301  OS Oryza meridionalis
#=GS A0A0E0EIC6/249-301  DE Uncharacterized protein
#=GS A0A0E0EIC6/249-301  DR GENE3D; a7779b5d40fa283bdea4d91c6179b71c/249-301; 
#=GS A0A0E0EIC6/249-301  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza meridionalis; 
#=GS I1QFY1/359-411      AC I1QFY1
#=GS I1QFY1/359-411      OS Oryza glaberrima
#=GS I1QFY1/359-411      DE Uncharacterized protein
#=GS I1QFY1/359-411      DR GENE3D; b72aa4dfdb3fe34e8d3c6cc27edb58a2/359-411; 
#=GS I1QFY1/359-411      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Liliopsida; Petrosaviidae; Poales; Poaceae; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza glaberrima; 
#=GF TC 139.8 1.1E-44
#=GF SQ 13
O48655/350-402              TFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVN
Q7EY07/173-225              TFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVN
Q0J7T6/351-403              TFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A0A0P0XCX8/248-300          TFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A0A0D3GWN5/277-329          TFRLPTYLHERLIAIRGAKYALEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A0A0E0EIC5/356-408          TFRLPTYLHERLIAIRGAKYALEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A2YRJ0/203-255              TFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A0A0E0EIC4/356-408          TFRLPTYLHERLIAIRGAKYALEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A0A0E0I7K5/351-403          TFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A0A0E0QEQ6/351-403          TFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A0A0E0LRL8/361-413          TFRLPTYLHERLIAIRGAKYALEDQGIAPTIENIAGSLNISEKKVLNATEAVN
A0A0E0EIC6/249-301          TFRLPTYLHERLIAIRGAKYALEDQGIAPTIENIAGSLNISEKKVLNATEAVN
I1QFY1/359-411              TFRLPTYLHERLIAIRGAKYALEDQGIAPTIENIAGSLNISEKKVLNATEAVN
#=GC scorecons              99999999999999999999599999999999999999999999999999999
#=GC scorecons_70           ********************_********************************
#=GC scorecons_80           ********************_********************************
#=GC scorecons_90           ********************_********************************
//