# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/180392
#=GF DE RNA polymerase sigma factor sigA
#=GF AC 1.10.10.10/FF/180392
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 12.323
#=GS O24629/424-502      AC O24629
#=GS O24629/424-502      OS Arabidopsis thaliana
#=GS O24629/424-502      DE RNA polymerase sigma factor sigA
#=GS O24629/424-502      DR GENE3D; 5b5e8c93b592e985f84794a34790c1c4/424-502; 
#=GS O24629/424-502      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS O24629/424-502      DR GO; GO:0001053; GO:0005515; GO:0006352; GO:0006355; GO:0009507; GO:0016987; GO:0071461; GO:0071482; GO:0080005; GO:2001141; 
#=GS A0A078J1Z3/413-491  AC A0A078J1Z3
#=GS A0A078J1Z3/413-491  OS Brassica napus
#=GS A0A078J1Z3/413-491  DE BnaA02g20170D protein
#=GS A0A078J1Z3/413-491  DR GENE3D; 1b0b25ee2b2f4c98e4ed0d779291a501/413-491; 
#=GS A0A078J1Z3/413-491  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS D7KZ14/425-503      AC D7KZ14
#=GS D7KZ14/425-503      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KZ14/425-503      DE RNA polymerase sigma subunit 1
#=GS D7KZ14/425-503      DR GENE3D; 460f387d999849878b32e64c75ab58de/425-503; 
#=GS D7KZ14/425-503      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS V4LCW0/441-519      AC V4LCW0
#=GS V4LCW0/441-519      OS Eutrema salsugineum
#=GS V4LCW0/441-519      DE Uncharacterized protein
#=GS V4LCW0/441-519      DR GENE3D; 7996a0f991eebd57a2cda697d8261d31/441-519; 
#=GS V4LCW0/441-519      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS M4CWB6/414-492      AC M4CWB6
#=GS M4CWB6/414-492      OS Brassica rapa subsp. pekinensis
#=GS M4CWB6/414-492      DE Uncharacterized protein
#=GS M4CWB6/414-492      DR GENE3D; 7f03314532d76cb5e122941e042f95af/414-492; 
#=GS M4CWB6/414-492      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS O49935/403-481      AC O49935
#=GS O49935/403-481      OS Sinapis alba
#=GS O49935/403-481      DE Sig1 protein
#=GS O49935/403-481      DR GENE3D; f1003ddcec39892a0d856ccd14200f63/403-481; 
#=GS O49935/403-481      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Sinapis; Sinapis alba; 
#=GS R0GH75/443-521      AC R0GH75
#=GS R0GH75/443-521      OS Capsella rubella
#=GS R0GH75/443-521      DE Uncharacterized protein
#=GS R0GH75/443-521      DR GENE3D; f1228cbd11f5a3d7883a523f4a57245d/443-521; 
#=GS R0GH75/443-521      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Capsella; Capsella rubella; 
#=GF TC 178.8 5.7E-57
#=GF SQ 7
O24629/424-502              DDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN
A0A078J1Z3/413-491          DEWALKDEVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKSKMEAMILKN
D7KZ14/425-503              DDLALKEEVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN
V4LCW0/441-519              DEWALKDEVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN
M4CWB6/414-492              DEWALKDEVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKSKMEAMILKN
O49935/403-481              DALALKDEVSKLISVTLGEREREIIRLYYGLDKECLTWEDISQRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN
R0GH75/443-521              DELALKEEVSKLITATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN
#=GC scorecons              9549996999999769999997999999999999999999997999999999999999999999999995999999999
#=GC scorecons_70           *__******************************************************************_*********
#=GC scorecons_80           *__***_*******_***************************_**************************_*********
#=GC scorecons_90           *__***_******__******_********************_**************************_*********
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