# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/175397
#=GF DE General transcription factor IIF subunit 1
#=GF AC 1.10.10.10/FF/175397
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 15.300
#=GS Q05913/508-577  AC Q05913
#=GS Q05913/508-577  OS Drosophila melanogaster
#=GS Q05913/508-577  DE General transcription factor IIF subunit 1
#=GS Q05913/508-577  DR GENE3D; f0d46982508079398ac0f2ca541fb3aa/508-577; 
#=GS Q05913/508-577  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila melanogaster; 
#=GS Q05913/508-577  DR GO; GO:0001096; GO:0005634; GO:0005674; GO:0006367; GO:0032968; GO:0045944; GO:0060261; 
#=GS B3P2L1/512-581  AC B3P2L1
#=GS B3P2L1/512-581  OS Drosophila erecta
#=GS B3P2L1/512-581  DE GG13412
#=GS B3P2L1/512-581  DR GENE3D; 90473e7007e6cefd251297a743c574fe/512-581; 
#=GS B3P2L1/512-581  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila erecta; 
#=GS B4GES3/446-516  AC B4GES3
#=GS B4GES3/446-516  OS Drosophila persimilis
#=GS B4GES3/446-516  DE GL21747
#=GS B4GES3/446-516  DR GENE3D; 97c0ad212b25ed9474a26f858067ee03/446-516; 
#=GS B4GES3/446-516  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila persimilis; 
#=GS B5DXG4/506-576  AC B5DXG4
#=GS B5DXG4/506-576  OS Drosophila pseudoobscura pseudoobscura
#=GS B5DXG4/506-576  DE Uncharacterized protein
#=GS B5DXG4/506-576  DR GENE3D; 0bfa26ff3a746e5743fbb39805f32b6c/506-576; 
#=GS B5DXG4/506-576  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; obscura group; pseudoobscura subgroup; Drosophila pseudoobscura; Drosophila pseudoobscura pseudoobscura; 
#=GS B4LZR9/489-569  AC B4LZR9
#=GS B4LZR9/489-569  OS Drosophila virilis
#=GS B4LZR9/489-569  DE Uncharacterized protein
#=GS B4LZR9/489-569  DR GENE3D; da99848a41c559ebff761127de68af91/489-569; 
#=GS B4LZR9/489-569  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; virilis group; Drosophila virilis; 
#=GS B4I4F8/506-575  AC B4I4F8
#=GS B4I4F8/506-575  OS Drosophila sechellia
#=GS B4I4F8/506-575  DE GM10893
#=GS B4I4F8/506-575  DR GENE3D; 478df318adbef2ce987aa5a1c34fd02e/506-575; 
#=GS B4I4F8/506-575  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila sechellia; 
#=GS B4PKS1/507-576  AC B4PKS1
#=GS B4PKS1/507-576  OS Drosophila yakuba
#=GS B4PKS1/507-576  DE Uncharacterized protein
#=GS B4PKS1/507-576  DR GENE3D; 662b6219c0fbdeba094d620880c5badf/507-576; 
#=GS B4PKS1/507-576  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila yakuba; 
#=GS B4K4P1/493-573  AC B4K4P1
#=GS B4K4P1/493-573  OS Drosophila mojavensis
#=GS B4K4P1/493-573  DE Uncharacterized protein
#=GS B4K4P1/493-573  DR GENE3D; 007546d03a4de058341930541766623d/493-573; 
#=GS B4K4P1/493-573  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Drosophila; repleta group; mulleri subgroup; Drosophila mojavensis; 
#=GS B4JHA2/490-570  AC B4JHA2
#=GS B4JHA2/490-570  OS Drosophila grimshawi
#=GS B4JHA2/490-570  DE GH19532
#=GS B4JHA2/490-570  DR GENE3D; b42667b8cddfecc291509600ac8d5c46/490-570; 
#=GS B4JHA2/490-570  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; grimshawi group; grimshawi subgroup; Drosophila grimshawi; 
#=GS B4N983/509-589  AC B4N983
#=GS B4N983/509-589  OS Drosophila willistoni
#=GS B4N983/509-589  DE Uncharacterized protein
#=GS B4N983/509-589  DR GENE3D; fbb1c09b18783579402a517d4c6baa9f/509-589; 
#=GS B4N983/509-589  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; willistoni group; willistoni subgroup; Drosophila willistoni; 
#=GS B3M0U9/507-577  AC B3M0U9
#=GS B3M0U9/507-577  OS Drosophila ananassae
#=GS B3M0U9/507-577  DE Uncharacterized protein
#=GS B3M0U9/507-577  DR GENE3D; 03ab5065ccf5131bd0bb9ecfb15de236/507-577; 
#=GS B3M0U9/507-577  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; ananassae subgroup; Drosophila ananassae; 
#=GS B4QYB4/508-577  AC B4QYB4
#=GS B4QYB4/508-577  OS Drosophila simulans
#=GS B4QYB4/508-577  DE GD19872
#=GS B4QYB4/508-577  DR GENE3D; 146151cfdd0e7bd8a2c14d62f2e23cf0/508-577; 
#=GS B4QYB4/508-577  DR ORG; Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophilinae; Drosophilini; Drosophila; Sophophora; melanogaster group; melanogaster subgroup; Drosophila simulans; 
#=GF TC 170.3 5.4E-54
#=GF SQ 12
Q05913/508-577          -----------GKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTPVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B3P2L1/512-581          -----------GKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTPVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B4GES3/446-516          ----------GSKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTGVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B5DXG4/506-576          ----------GSKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTGVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B4LZR9/489-569          SLPSSFAGVVSNKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTGVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B4I4F8/506-575          -----------GKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTPVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B4PKS1/507-576          -----------GKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTPVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B4K4P1/493-573          SLPSSFAGVVNNKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTGVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B4JHA2/490-570          SLPSSFAGVVSNKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTGVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B4N983/509-589          SLPSTFAGVVNNKAEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTGVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B3M0U9/507-577          ----------GAKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTGVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
B4QYB4/508-577          -----------GKVEDYGITEEAVRRYLKRKPLTATELLTKFKNKKTPVSSDRLVETMTKILKKINPVKHTIQGKMYLWIK
#=GC scorecons          111111111114979999999999999999999999999999999995999999999999999999999999999999999
#=GC scorecons_70       ____________***********************************_*********************************
#=GC scorecons_80       ____________***********************************_*********************************
#=GC scorecons_90       ____________*_*********************************_*********************************
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