# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/159536
#=GF DE RNA polymerase sigma factor sigB
#=GF AC 1.10.10.10/FF/159536
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 19.587
#=GS O22056/492-572      AC O22056
#=GS O22056/492-572      OS Arabidopsis thaliana
#=GS O22056/492-572      DE RNA polymerase sigma factor sigB
#=GS O22056/492-572      DR GENE3D; b5b88dad545220559df7ae77a78947bd/492-572; 
#=GS O22056/492-572      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana; 
#=GS O22056/492-572      DR GO; GO:0001053; GO:0006352; GO:0006399; GO:0009507; GO:0009658; GO:0010114; GO:0016987; GO:0071482; GO:2001141; 
#=GS A0A078H2Q8/494-573  AC A0A078H2Q8
#=GS A0A078H2Q8/494-573  OS Brassica napus
#=GS A0A078H2Q8/494-573  DE RNA polymerase sigma factor
#=GS A0A078H2Q8/494-573  DR GENE3D; 168775e002727e1338718f851c3f2adc/494-573; 
#=GS A0A078H2Q8/494-573  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS D7KIT0/492-572      AC D7KIT0
#=GS D7KIT0/492-572      OS Arabidopsis lyrata subsp. lyrata
#=GS D7KIT0/492-572      DE RNA polymerase sigma factor
#=GS D7KIT0/492-572      DR GENE3D; 35f1a93c535d67c51ef7ac28902b1060/492-572; 
#=GS D7KIT0/492-572      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis lyrata; Arabidopsis lyrata subsp. lyrata; 
#=GS A0A087HM22/540-620  AC A0A087HM22
#=GS A0A087HM22/540-620  OS Arabis alpina
#=GS A0A087HM22/540-620  DE RNA polymerase sigma factor
#=GS A0A087HM22/540-620  DR GENE3D; 480c0714fd287364470fc2aeeb4c3670/540-620; 
#=GS A0A087HM22/540-620  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Arabideae; Arabis; Arabis alpina; 
#=GS M4EPL2/491-570      AC M4EPL2
#=GS M4EPL2/491-570      OS Brassica rapa subsp. pekinensis
#=GS M4EPL2/491-570      DE RNA polymerase sigma factor
#=GS M4EPL2/491-570      DR GENE3D; 4b1cc8cb33e65f6c231babeaa85ebc1b/491-570; 
#=GS M4EPL2/491-570      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS M4DQ26/490-572      AC M4DQ26
#=GS M4DQ26/490-572      OS Brassica rapa subsp. pekinensis
#=GS M4DQ26/490-572      DE RNA polymerase sigma factor
#=GS M4DQ26/490-572      DR GENE3D; 82272b178118990ef5f5838c66be1d0b/490-572; 
#=GS M4DQ26/490-572      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica rapa; Brassica rapa subsp. pekinensis; 
#=GS A0A078DW64/490-572  AC A0A078DW64
#=GS A0A078DW64/490-572  OS Brassica napus
#=GS A0A078DW64/490-572  DE RNA polymerase sigma factor
#=GS A0A078DW64/490-572  DR GENE3D; 926e16c7db4c7015c76ad88face14aea/490-572; 
#=GS A0A078DW64/490-572  DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Brassica; Brassica napus; 
#=GS V4KE81/501-579      AC V4KE81
#=GS V4KE81/501-579      OS Eutrema salsugineum
#=GS V4KE81/501-579      DE RNA polymerase sigma factor
#=GS V4KE81/501-579      DR GENE3D; f3f62e8563b6db12c2cfd2344d090151/501-579; 
#=GS V4KE81/501-579      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Eutremeae; Eutrema; Eutrema salsugineum; 
#=GS Q9MTH3/492-574      AC Q9MTH3
#=GS Q9MTH3/492-574      OS Sinapis alba
#=GS Q9MTH3/492-574      DE RNA polymerase sigma factor
#=GS Q9MTH3/492-574      DR GENE3D; f1c7cb7e4ca2669f94853a766d1b8edb/492-574; 
#=GS Q9MTH3/492-574      DR ORG; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; rosids; Brassicales; Brassicaceae; Brassiceae; Sinapis; Sinapis alba; 
#=GF TC 184.7 1.3E-58
#=GF SQ 9
O22056/492-572              LIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVAQS--
A0A078H2Q8/494-573          LIKQFMREDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVSQ---
D7KIT0/492-572              LIKEFMRQDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGEMMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVAQS--
A0A087HM22/540-620          LIKQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVAQS--
M4EPL2/491-570              LIKQFMREDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVSQ---
M4DQ26/490-572              LMKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVAQTKE
A0A078DW64/490-572          LMKQFMREDLDKVLDSLGTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLVAQTKE
V4KE81/501-579              LIKQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIESSAFRKLKNKKRSNHLQQYLVA----
Q9MTH3/492-574              LMKQFMRQDLDKVLDSLSTREKQVIRWRFGMEDGRMKTLQEIGETMGVSRERVRQIDTSAFRKLKNKKRNSHLQQYLVAQTKE
#=GC scorecons              96979996999999999599999999999999999999999999699999999999779999999999967999999976200
#=GC scorecons_70           *****************_**************************************************************___
#=GC scorecons_80           *_*_***_*********_**************************_************************_********_____
#=GC scorecons_90           *_*_***_*********_**************************_***********__***********__*******_____
//