# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/153198
#=GF DE Sigma factor PvdS, controling pyoverdin biosynthesi
#=GF AC 1.10.10.10/FF/153198
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 28.468
#=GS G3XCV1/100-176      AC G3XCV1
#=GS G3XCV1/100-176      OS Pseudomonas aeruginosa PAO1
#=GS G3XCV1/100-176      DE Sigma factor PvdS
#=GS G3XCV1/100-176      DR GENE3D; de92a49b2e4171b68f2eef4ead9018de/100-176; 
#=GS G3XCV1/100-176      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS G3XCV1/100-176      DR GO; GO:0000976; GO:0001216; GO:0006355; GO:0016987; GO:0032993; GO:0045893; GO:0071281; GO:1900378; 
#=GS P95425/100-176      AC P95425
#=GS P95425/100-176      OS Pseudomonas aeruginosa
#=GS P95425/100-176      DE Putative RNA polymerase sigma factor FecI
#=GS P95425/100-176      DR GENE3D; de92a49b2e4171b68f2eef4ead9018de/100-176; 
#=GS P95425/100-176      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS P95425/100-176      DR GO; GO:0006355; GO:0016987; GO:1900378; 
#=GS A0A0X1T1L7/101-175  AC A0A0X1T1L7
#=GS A0A0X1T1L7/101-175  OS Pseudomonas agarici
#=GS A0A0X1T1L7/101-175  DE RNA polymerase subunit sigma-70
#=GS A0A0X1T1L7/101-175  DR GENE3D; 027c46b2de51edcc54459d56de1ceef2/101-175; 
#=GS A0A0X1T1L7/101-175  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas agarici; 
#=GS J3GNV0/100-176      AC J3GNV0
#=GS J3GNV0/100-176      OS Pseudomonas sp. GM55
#=GS J3GNV0/100-176      DE RNA polymerase sigma factor, sigma-70 family
#=GS J3GNV0/100-176      DR GENE3D; 0535e807a949f8f4703fd1639965d198/100-176; 
#=GS J3GNV0/100-176      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. GM55; 
#=GS A0A177SVA7/97-175   AC A0A177SVA7
#=GS A0A177SVA7/97-175   OS Pseudomonas putida
#=GS A0A177SVA7/97-175   DE RNA polymerase subunit sigma-70
#=GS A0A177SVA7/97-175   DR GENE3D; 1aa7e358b825a6eb9222f76f1b9eb2b0/97-175; 
#=GS A0A177SVA7/97-175   DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS L1M5C9/97-175       AC L1M5C9
#=GS L1M5C9/97-175       OS Pseudomonas putida CSV86
#=GS L1M5C9/97-175       DE Extracytoplasmic-function sigma-70 factor
#=GS L1M5C9/97-175       DR GENE3D; 1aa7e358b825a6eb9222f76f1b9eb2b0/97-175; 
#=GS L1M5C9/97-175       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida; 
#=GS A0A0D6SUY1/106-183  AC A0A0D6SUY1
#=GS A0A0D6SUY1/106-183  OS Pseudomonas sp. FeS53a
#=GS A0A0D6SUY1/106-183  DE Sigma factor PvdS, controling pyoverdin biosynthesis
#=GS A0A0D6SUY1/106-183  DR GENE3D; 1cd2bc781b2e9a284a59ad2aebf6e20f/106-183; 
#=GS A0A0D6SUY1/106-183  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. FeS53a; 
#=GS S6IMG0/101-174      AC S6IMG0
#=GS S6IMG0/101-174      OS Pseudomonas sp. CF161
#=GS S6IMG0/101-174      DE Extracytoplasmic-function sigma-70 factor
#=GS S6IMG0/101-174      DR GENE3D; 682511d099aa4bc9909414ca2ec74e14/101-174; 
#=GS S6IMG0/101-174      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. CF161; 
#=GS Q51350/100-176      AC Q51350
#=GS Q51350/100-176      OS Pseudomonas aeruginosa
#=GS Q51350/100-176      DE PvdS
#=GS Q51350/100-176      DR GENE3D; 6abac24ef853fee0a49bde21c2952c7b/100-176; 
#=GS Q51350/100-176      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS U3HA83/74-152       AC U3HA83
#=GS U3HA83/74-152       OS Pseudomonas alcaligenes OT 69
#=GS U3HA83/74-152       DE RNA polymerase sigma70
#=GS U3HA83/74-152       DR GENE3D; 7d16597ceee0e2e13f2fe6fd32216248/74-152; 
#=GS U3HA83/74-152       DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas alcaligenes; 
#=GS A0A0N0VJJ0/102-175  AC A0A0N0VJJ0
#=GS A0A0N0VJJ0/102-175  OS Pseudomonas fuscovaginae
#=GS A0A0N0VJJ0/102-175  DE RNA polymerase sigma factor, sigma-70 family
#=GS A0A0N0VJJ0/102-175  DR GENE3D; 97ac57dbae75e22c1907b9f6165a361b/102-175; 
#=GS A0A0N0VJJ0/102-175  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae group; Pseudomonas fuscovaginae; 
#=GS A0A157WJ94/100-176  AC A0A157WJ94
#=GS A0A157WJ94/100-176  OS Enterobacter cloacae
#=GS A0A157WJ94/100-176  DE RNA polymerase sigma factor, sigma-70 family
#=GS A0A157WJ94/100-176  DR GENE3D; de92a49b2e4171b68f2eef4ead9018de/100-176; 
#=GS A0A157WJ94/100-176  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex; Enterobacter cloacae; 
#=GS A0A0H3R8V3/100-176  AC A0A0H3R8V3
#=GS A0A0H3R8V3/100-176  OS Pseudomonas aeruginosa str. Stone 130
#=GS A0A0H3R8V3/100-176  DE Sigma-70 family RNA polymerase sigma factor
#=GS A0A0H3R8V3/100-176  DR GENE3D; de92a49b2e4171b68f2eef4ead9018de/100-176; 
#=GS A0A0H3R8V3/100-176  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A1D5C3E0/100-176  AC A0A1D5C3E0
#=GS A0A1D5C3E0/100-176  OS Pseudomonas sp. P179
#=GS A0A1D5C3E0/100-176  DE Sigma-70 family RNA polymerase sigma factor
#=GS A0A1D5C3E0/100-176  DR GENE3D; de92a49b2e4171b68f2eef4ead9018de/100-176; 
#=GS A0A1D5C3E0/100-176  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas sp. P179; 
#=GS W1MJZ0/100-176      AC W1MJZ0
#=GS W1MJZ0/100-176      OS Pseudomonas aeruginosa VRFPA03
#=GS W1MJZ0/100-176      DE RNA polymerase sigma70
#=GS W1MJZ0/100-176      DR GENE3D; de92a49b2e4171b68f2eef4ead9018de/100-176; 
#=GS W1MJZ0/100-176      DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GS A0A0H2ZBH9/100-176  AC A0A0H2ZBH9
#=GS A0A0H2ZBH9/100-176  OS Pseudomonas aeruginosa UCBPP-PA14
#=GS A0A0H2ZBH9/100-176  DE Sigma factor PvdS
#=GS A0A0H2ZBH9/100-176  DR GENE3D; de92a49b2e4171b68f2eef4ead9018de/100-176; 
#=GS A0A0H2ZBH9/100-176  DR ORG; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group; Pseudomonas aeruginosa; 
#=GF TC 176.7 1.7E-56
#=GF SQ 16
G3XCV1/100-176              ---IQGASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTAERQ
P95425/100-176              ---IQGASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTAERQ
A0A0X1T1L7/101-175          ----HGASPETSHINFSTLEHIADALTELPQRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVSGTR-
J3GNV0/100-176              ---IQGASPETTHINFSTLEHIADALTELPSRTRYAFEMYRLHGVPQKDIARELGVSPTLVNFMIRDALVHCRKVSGKRG
A0A177SVA7/97-175           NVVVQGASPEAAHINFATLEHIADALTELPPRTRYAFEMYRLHGVAQKDIAKELGVSPTLVNFMIRDALVHCRKVSSAR-
L1M5C9/97-175               NVVVQGASPEAAHINFATLEHIADALTELPPRTRYAFEMYRLHGVAQKDIAKELGVSPTLVNFMIRDALVHCRKVSSAR-
A0A0D6SUY1/106-183          --VMQGASPEASHINYATLEHIADALGELPARTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTRAQN
S6IMG0/101-174              ----HGASPETSHINFSTLEHIADALTELPSRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVSGN--
Q51350/100-176              ---IQGASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSTTLVNFMIRDALVHCRKVTAERQ
U3HA83/74-152               -VVTQGASPETSHINYATLEHIADALAELPARTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTRAEA
A0A0N0VJJ0/102-175          -----GASPETSHINFSTLEHIADALTELPQRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVSAHR-
A0A157WJ94/100-176          ---IQGASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTAERQ
A0A0H3R8V3/100-176          ---IQGASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTAERQ
A0A1D5C3E0/100-176          ---IQGASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTAERQ
W1MJZ0/100-176              ---IQGASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTAERQ
A0A0H2ZBH9/100-176          ---IQGASPETSHINYATLEHIADALTELPKRTRYAFEMYRLHGVPQKDIAKELGVSPTLVNFMIRDALVHCRKVTAERQ
#=GC scorecons              00036999996699976999999999799939999999999999979999989999989999999999999999964461
#=GC scorecons_70           ____**************************_********************************************_____
#=GC scorecons_80           _____*****__****_*************_********************************************_____
#=GC scorecons_90           _____*****__***__*********_***_**************_*****************************_____
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