# STOCKHOLM 1.0
#=GF ID 1.10.10.10/FF/107780
#=GF DE RNA polymerase sigma factor
#=GF AC 1.10.10.10/FF/107780
#=GF TP FunFam
#=GF DR CATH: 4.2
#=GF DR DOPS: 0.000
#=GS P35165/89-167      AC P35165
#=GS P35165/89-167      OS Bacillus subtilis subsp. subtilis str. 168
#=GS P35165/89-167      DE ECF RNA polymerase sigma factor SigX
#=GS P35165/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS P35165/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A3F488/89-167      AC A3F488
#=GS A3F488/89-167      OS Bacillus subtilis subsp. subtilis str. 168
#=GS A3F488/89-167      DE RNA polymerase sigma factor
#=GS A3F488/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS A3F488/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A125UJL1/89-167  AC A0A125UJL1
#=GS A0A125UJL1/89-167  OS Bacillus sp. LM 4-2
#=GS A0A125UJL1/89-167  DE RNA polymerase sigma factor
#=GS A0A125UJL1/89-167  DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS A0A125UJL1/89-167  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. LM 4-2; 
#=GS A0A0T8PSY5/89-167  AC A0A0T8PSY5
#=GS A0A0T8PSY5/89-167  OS Streptococcus pneumoniae
#=GS A0A0T8PSY5/89-167  DE RNA polymerase sigma factor
#=GS A0A0T8PSY5/89-167  DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS A0A0T8PSY5/89-167  DR ORG; Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pneumoniae; 
#=GS M4KUI2/89-167      AC M4KUI2
#=GS M4KUI2/89-167      OS Bacillus subtilis XF-1
#=GS M4KUI2/89-167      DE RNA polymerase sigma factor
#=GS M4KUI2/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS M4KUI2/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS L8AJH8/89-167      AC L8AJH8
#=GS L8AJH8/89-167      OS Bacillus subtilis BEST7613
#=GS L8AJH8/89-167      DE RNA polymerase sigma factor
#=GS L8AJH8/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS L8AJH8/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS A3F493/89-167      AC A3F493
#=GS A3F493/89-167      OS Bacillus subtilis
#=GS A3F493/89-167      DE RNA polymerase sigma factor
#=GS A3F493/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS A3F493/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; 
#=GS D4FY82/89-167      AC D4FY82
#=GS D4FY82/89-167      OS Bacillus subtilis subsp. natto BEST195
#=GS D4FY82/89-167      DE RNA polymerase sigma factor
#=GS D4FY82/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS D4FY82/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. natto; 
#=GS G4EUC3/89-167      AC G4EUC3
#=GS G4EUC3/89-167      OS Bacillus subtilis subsp. subtilis str. SC-8
#=GS G4EUC3/89-167      DE RNA polymerase sigma factor
#=GS G4EUC3/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS G4EUC3/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A3F489/89-167      AC A3F489
#=GS A3F489/89-167      OS Bacillus subtilis subsp. subtilis str. NCIB 3610
#=GS A3F489/89-167      DE RNA polymerase sigma factor
#=GS A3F489/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS A3F489/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A0A199WLP1/89-167  AC A0A199WLP1
#=GS A0A199WLP1/89-167  OS Bacillus subtilis subsp. subtilis
#=GS A0A199WLP1/89-167  DE RNA polymerase sigma factor
#=GS A0A199WLP1/89-167  DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS A0A199WLP1/89-167  DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS A3F496/89-167      AC A3F496
#=GS A3F496/89-167      OS Bacillus subtilis subsp. subtilis str. SMY
#=GS A3F496/89-167      DE RNA polymerase sigma factor
#=GS A3F496/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS A3F496/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus subtilis group; Bacillus subtilis; Bacillus subtilis subsp. subtilis; 
#=GS U2AHK5/89-167      AC U2AHK5
#=GS U2AHK5/89-167      OS Bacillus sp. EGD-AK10
#=GS U2AHK5/89-167      DE RNA polymerase sigma factor
#=GS U2AHK5/89-167      DR GENE3D; 1bd69961114db276bc1a754a8b973b13/89-167; 
#=GS U2AHK5/89-167      DR ORG; Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus sp. EGD-AK10; 
#=GF TC 191.0 1.2E-61
#=GF SQ 13
P35165/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
A3F488/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
A0A125UJL1/89-167          QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
A0A0T8PSY5/89-167          QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
M4KUI2/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
L8AJH8/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
A3F493/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
D4FY82/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
G4EUC3/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
A3F489/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
A0A199WLP1/89-167          QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
A3F496/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
U2AHK5/89-167              QDVRDQQLLPDELAVQHENVREIYAALDQCTIDQRAVIILRFIQGYSIQETAKALRFSESKVKTTQHRGLKVLRKHMEL
#=GC scorecons             0000000000000000000000000000000000000000000000000000000000000000000000000000000
#=GC scorecons_70          _______________________________________________________________________________
#=GC scorecons_80          _______________________________________________________________________________
#=GC scorecons_90          _______________________________________________________________________________
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